XLOC_002603 (gene) - C. hemisphaerica

Overview
NameXLOC_002603
Unique NameXLOC_002603
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000047:190223..198984+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002603 ID=XLOC_002603|Name=XLOC_002603|organism=Clytia hemisphaerica|type=gene|length=8762bp|location=Sequence derived from alignment at sc0000047:190223..198984+ (Clytia hemisphaerica)
ACTATTGACTTGGTTCTCGTAGATCAAAAACATGTTCAATTGTTTTCAAT CTTTTCTTGAATTCTTCTGATacataatttgttgaaaatcgTTGCAATTT AGAAGTATTTAAACATAGATTAATCTTCAAGAATCCCTTACTAACAGACA AGCTAAAAGAATACATTAAAATTAACTACTGTAGGTAGTTGGTGGTGGAA ACTGTTCTGTTTGTCCGTCATTTTGAGCTCTTTTTCCGCCATgtgctttt ttgttttgatattttgatagaTGACTATTAGATAAGGCGCTTTAAAAAAG CATAGCAGATATATATGTAGGGGAGGGCTCCCGAATTTTCTGTCAATAAA CTCTTATGCTTTTTAGGTAAACCAACAACCATAGATTGAACTCACAAGAA AATTTTTAGTGTGAGAAGCGGACGTCTTAAATTTTAGCTGGTAAGTGTAC AATTTTATTTGGTTTCATTTCGTTTTATTTCTAACctcaaaataactttt taaagtttttacttttttcatttatagttaCGAAGAATGAGTACCAGTAA AGTAAGAGGGCCCATTCAGAAAAGCTTGAAATATGTTCCAAATGTCAAGG CAGTAACAACTCGTGCAAAGATGCTCAAAGTTCCACATAAACATCCTTCA AATGATACATTCGAGCCTTTTTGGAAATTCGGAAGATATGTTTGTCAGTT AAAGAGATTGACAATAAACTATTGTTCTGATAATCCAGGGAGTAGAGGCA TTAGGTGAGTCCAAGCAATTCGCTATTCCATTTTAGCTAGCTAGAAGATA GAAGGGAGGGAGGgataaaaccagaaaaatataAGCAATGTCAATTTTGA AGAGGTAGCGTCCTTTTGAATGTTGAATAAGATCTTACACTAAAAGATTC TTCTGACCTTTCTGGAAATTTTCTGCTAATTTTACGGGATATATatatac tgtaagttggtctagtgttgacatccctcttctaatttcagGACCCTTCC TTTCTGGAGCAgctaaaaaacactatttttctctccgGAAAGTTCCAGAG CTCTTCCGGTGCTTTCGGAGCAGGTGATTTTTAACACGTTCTTAAAACCG AGTGATATCGTAATTATATCGCAGATATCTCCAGATGATAttaatcgaac ggaatcgacgatcgaaccagtcgaaccaaattgaacgcaatcgaccgatt gaaattcaattgtcgaacgcaatcgaatctcaatcaaatattaccgcaat tttcagattcgattgatattcgaattgcgttcgattgatgttcgattgtc gatagaccttttttcaaagaggacgtcctgttgaataattatgtagtcca gccataaaaacaatgatagagccatgcataatttatgtatcatgcatatt gtaataattatgcatggttttatcattgtttttctgctggactacttaat tattcaacagggtggcctctttgaaaaaggtctattcattgacccccaga ttgttcatcgcataatttctacggaaaatcgaaagtaatttcattcggct tgtgatgtttgagagcttggatgttgggaagctgcaagaataaagccaga cgatctcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNgtcgaatattacccagaattttgacgttcgattg agattcgattgcgttcgacaatcgaatttcaatcggtcgattgcgttcga tttggttcgattggttcgatcatcgattccgttcgattgagatcgtctgg atattTTGCTCAGAAACAACGGAAGTGCACCGGAACGTTCCAGAGTTCCG GTGCAGACCATGTCAATCAGTGAAAAACGTGCTCCAGAACACCCATGGCA TGAACCCCCCCAGCCCGCAGGGGGGGGGctacaaccaaaatcttccggaa aaaggctgggggctggattttttttcaatttcagggggtacctatgacct ctgggggtatctaacttttatgcagtaaggtctgggggcttgagaactat attttatcttgcttttatctaataactatcattattctttttaattgtaa aaatatacaatttttttcatttcttgacatatactcaaatcacagggggt accaatcacagggggtacctactaacgtctgttgtttgggggtacctaaa attcagggaaTACCTATTTTCTaagggggtacctaaacccctggtccatg ccatgaACACCTGAAGTgccggtttgtgtaatttacgatgcgcgatccaa cgattcacgatgcacgatgcacgatccatgcatgatttatgtcgatttat gttaattattctaattatgtatgaataagttttcataatgctagctacac aataacgaaaaaaaaataaaaaaaaaattaaaagaagaaggggaaataat ttatcataatcagaatgattaaaataacttatatcttctgtgtagaaaaa ccaaaaattgatagcgagagaaagaaaatgttcgtCGCATACCTCActcg tttttaaaatgaaagaaaaggccttgacgtcatagaaaagttttcacgcg aaaaatttattaaaacacTTAATTCCCTTggacttggagagggaatgttt gtaaacattatCACAGGAGTATACCTTCAATCGATAAACAAATCAGACTA TATAGAAACATATAAAAGCCAACTATCATCTATCACTGGTATTTTGAACC AATTTTCCGCTACATCTGAATCGATTATCCTTGGTGACTTTCAAAGCTGC CCGAATGAACCTATCACACAAAGGACTACACCACCCAATGCTCTTTCACC TTACCTATCAGGATTTATTGCCGATAATNCCTATCACACAAAGGACTAAA CCAACCAATGCTCTTTCACCTTACCTATCAGGATTTATTGCCGATAATAA CCTTGTTCCAATAGACATCACCCACGGTCATGGTCCAAACTACACATACC ACAATATTTCGCTTCCCAACAAGTCATATATAGACCATGTCCTTATATCA CAATCGTTACTAGATCTACTTGTTGACTCACACGTCCCCAAACCAGATGC CTTGAATACAGGCGACCACCTAGCTGTTAAATTGACGTTACAATCCCCAC CTTcaaccatagaggtataaagaaaacaggagttgaatgtgtcggtaatt ggtcgttaaagtcttttgatttcttttataaaatgtatcaaaagaaattc taagctcacAACGAAAAAAGTTTCTGTTCCATTTTGTTAACcgtgaaatt ttgttttgaaaaaaatactttcttaaGCCAGAAAATggaaagttctttat aagcaaacGNCTGACCAATGACTATATACCAACCCATATGTGGAGAAATA GTGAATTTGTAAAACTATACAAGGAAAAAGTTTCAGAAAACATCACTAAA ATCAACAATGTAATCGACACTGAAACCATGCTTGATAACCTACAGAATAT CCTACACTCATCGGCATCTGACTGCTACACAACTTTTAAACAAGACTTCT TCGAATTTCCAGCTAAACGCTGGTGGAACAACGAACTAACTGAAGCcaag aaaaatttacaattacACTTTAACATTTGGCGAGAAAACAACTTCCCTAG AAACGATTCAGACATCTCATATAACCGTTACAAATTCTCACGTAAGATAT TCAGAACACTCGTTAAACGCGCAAAGCACCAAGCAACAGTTGAACACTAT ATTAATGTGGAAAAGCTCAAGAACTTAAACCCATCTTCATACTGGGCTCA AATTAATCTAATTAAGAAAAAGCAACAGAAATTATACACAATCAATGGCA AATCTACCAAAATCGACATTGCTAAAGAATTCGGTGACCACTTTGATAAG CTCCTTAATACACCAAGAATCGACACCATTGATAACACCACATCGAATGA AGAACTTGTTAATATGCTACATGAACTTCAAAAAGATCTCAATTCCGACG AATTTTACGTTACCTAGCATCATCAGTAatagaaaaactaaaaacagGTA AATCTCGTGACCCTTTCCAGTTGTTACCAGAACATTACAAATATGCATCA AGTGACACATTCAATGAATACCTCACCAAACTAATAAACGAAATATTTCG CTCCAAAGACATTCCTACATCACTGAGTACGTCAATACTTATACCGCTGG TGAAATCACACAAAAAGTCTTTGAACGACGCAAATAACTACCGTAGAATA AGTCTTCTCTCGATCATCACAAAAATACTTGAACTTATCATTATTGAGAA ATGCCCTCAACTTCTCAATACGGCTTCACTAAAGCATCATCATCGATTCA TGCTGAGCTCGTCATCCAAGATACAATACGATATTATAATAACAACAATA CACCGGTATACGTTTGTAGCCTGGACATAGAGAAAGCCTTTGACTGTTGC AACTGGCAAACACTTTTCACCAAACTTCTTNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNctctaagggtcactttttcactaaaatttggtctctctaa gggtcggttttcggaggtcccgtccgcacatacccctcattcaccaaccc tagtacccctcccGGGCGCTGTATATACTTTTAGCTTTTTATTTTTCCCT AACCATGTACCTTATCTTATAGGtgataaaaaagatttattattattatt atagaattttttttcataatagtTATTTGGGGGGGTTGGCATTAGGTAGG GCTGTCGAAATTGGGACCACTCACGCTATGcgtgcgtacagggggagggg aggggtcaaagaaAAATGTATGTATGCAGAGAATAATTcttcatagccct ttttttgcttgtagaatcttttgaaagagaataaaaagagaattattgtT CGTTtattatacgcatcaaggaaaagaaaaagtttcttaataaacattga gtttcatgtactatgaaataaaggtccgaattcgaaaatttcttcaaccg agggggggggggctgaatgaaaaagtacacgTACTTACCAGGGGATATAG CCATTTGCATCCCCttcccccccgggggggggggggctgaatgaaaaagt acacgTACTTACCAGGGGATATAGCCATTTGCATCCCCttcccccccggg ggggggggggctgaatgAAAAAGTGTACGTACTTAacagggggtatagcc atttgcatACGCTTGCctacagggggagggggtactcgattttcaacatt ttagtgcgtacgtactatgtggacggccccttatcCGGTTATCCGATGTT AAAAAGTATCCTCATCCAACACCAGACGTGTGCCCAGTGTTTGTAAAGTC TGGTGCGTTGGCAGagtatttttgccaaaaacctAGATTTTTTGCAAAAC CTTTAGTAAAATGAAAGGAATTAGTTGAAAAAGTGAAAGCTAAAATATCT ActcacaaaaaaattttccctcaAAAGGTAGTTTAAAAGTTTTGACAATA TTTACATACTTTTTCTTtcataagaatatactttataagaataatcaTGA TGAATTAAGGATATGCTTAtaataccaccatcatggaatttgacAACTGA AGCTAACAATGTCAATTCTATAGCCTTTTACTTGTTAATAGCCAATTATT CCCCAGTAATGCTGaagtttcacaaaaatgccaaattcttgTTTTATGTA TACATTTCATCCTAGATTTAGGCTGtcatgatttttccaaaaaaataata gtATCCATCATGATGAAATAGAAAAAcaccgttcttataaaaaagcgtct aGTTGAAACATAAAGACAATCCTTCGCCTCGTTTCTATATGATGACAATA GCGTTTTATTGAATTTCATTAGAAAGTGCTATAAACTCAGTTTTCTTTTC TTGTATTTCGATGgctgaaattcatttttaattaattttaggCGGTTTCT CGATTTGGAAGTTGACCAATTTATAGAAAACAATCCAGAAGTTGCTGTTT ACCTCCAAGAAAGAAGAGGACAATCACCGAGGCTTGTGGCAAACTACTGT ATGTTGCTTTCAtaatctcttcttttttttaatcgaTTTAAATCGAGCTC AGTGTTTATGTCTAACATCTCGTAGTATACTATATACGACACTTTTTtct aaaacatattttcaaagCACAGTAAAAACTTTAATTCATAGAAATGATAT TTGAATTTCCTTAGATGATGTTTTAAAATCATGTCAAATAAATGAATATT CATAAGTAtgagtaaaaaacttttttttctcggTCAAATCAAAATTGTGG TTGTTTAATTTATTGCTCTCTAAAACGTTCCTTTCACAGTGAATGGAAAC TCTCGTATCATACAGATCCCAAATAACGACGACATTGCCATTAGAGAATG GTTAGAACGTTTACGAAACGAAAGTGGACGACAATGGAGAAGCGAGAGAT TACATCAACCTTGGTTAAGTGATAATCCATCTATACAAGGAACGTGGTCA CCTTTCCTTAACAAACCACCTGTTGATATTAACGATGAACATTATGTTGA TAAGTGAGACCAAGgatattctttctttttgtatttttagattttttata cATATAGTAAGCTGAAATGTAAATATGATTGAttgatacttttgaaaatt gatatcgaactataaaattttgaaatccagGTTACAATTTTTGAACCCAC AAAGAatgctttttcggatttttttttagtttccgATGGGAAAAGATGAC GTTTAACTCTTTTTGGTCCAGGCTTTTTTGAAGAATAATAATCCGAGGAA ggatacagggtgtcccgaaaaaaagccCTGTGTTAGACCACTCATTCTAT GGTAGAAAGTTTTTTGTGTATAactcaaaaatcgaaatattcaatgaaat aaAGTCGGAAATAAAGTGGAAGCTAAAATCgctattttcgccattttcgc ccaaactctaaattttgaaaaatgttaaattaCACAAAAACCTCAATATT ATTTCGACCAAGATTGTGGGAAAGATTTTTAATTTCTGTCATTATATAAT AATGAATCTGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004616TCONS_00004616Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004616-proteinTCONS_00004616-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000047supercontigsc0000047:190223..198984 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
41.98 39.08 20.33 17.67 32.45 24.87 23.87 26.78 27.32 24.04 21.19 20.66 17.36 17.07 21.71 22.18 39.48 37.38 12.7 12.02 32.62 30.45 41.21 36.22 18.1 18.32 20.28 16.62 22.78 21.08