XLOC_002477 (gene) - C. hemisphaerica

Overview
NameXLOC_002477
Unique NameXLOC_002477
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000044:701936..705382-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002477 ID=XLOC_002477|Name=XLOC_002477|organism=Clytia hemisphaerica|type=gene|length=3447bp|location=Sequence derived from alignment at sc0000044:701936..705382- (Clytia hemisphaerica)
ATCTTTTAAGTTACAATGGTATGATGGTTGAAATTGATAGTGAAATGTTG TGTTCTTTGTACATTCAAATTTTTTTTTTAGATATGAGACTGCAAAATGA ATAATGAAAGTAGTGAAAAATTAATTAATGAGCGTACACCTCTAAAAAAA TCTGTCAGTTTTGACAGTCAGACTCGTGCTCCAAGTCACATTCTTAACAT TAATAACAAAATGAATGGAACAAGAAAACGAGCCCAAAGTTTAAGAGATA TGGCAAGTTCAAAAAGTGATGAAATTGTCAGTGGCGTTCGAGTAAAATCA AACAAAAGAGCCTCCAAAAGAAAGCCCACTGATCATCGTCTTGTTGAAAA GAACGGTAAAAGAAATGTCAAATCTAGACATTTACCACGTGATCGTTATC TTCAAGATATTTTTACAACAATTATTGATGCAAAATGGAAATGGATGCTG GTTGTCTTCACCTTGTTTTATCTTGGTTTGTATCATATTATACCTTTTTA TTACCTTACTTTTACCTTTCTAAGTACATATTTGTGGTCACGGGGGAGAT TTCCTAATAAACTCATGAAAACTAATCAAACCTTCTTAGGTCAAATGTTT CCTTAACTTATTTACCTATTTTTGCTAGTCAGTTAACCCTATTCATCCTA GGCTTTTAAGGGCGGTTCAAAACTAGGGGGGGGGGGCTTTTCCTGTACCA CCCCTTTAAACTTTTGATCCAGTGGGTCTTTTTGGATGAAATTTGGCACA CAAGATCCTTGTCACATAAGGCAACTTTTGACGAAAAATCTTTTTGATGG ACGTTACTCGTCATGCCCAAAGTGAGCAAAAACTGAAAATTTCCTTTGTT CTTATAAATAGCTATTGTATTCTAACAAATGCTTTAGAAAAAAGTTACTT GAGTCTAAAATGCTTATTTTATCCTAAATATTCAATAAATTACGCTTTAA ACAATATATATCTGACATAAAAAATAAATTTGTATTGGAAAAGTGTCAAT TTTTGTGACACTTTTTTTTTAGTAATGTCATCATGCTCATAATGTCATCA TGCTCAAGGTGTCAAATTTTTTATTTATTTTGAAGCTAAATAAAAGTTAG GAATTTACAGAAAATTTCATGGCAAAAACTCTATTATTTCAGGAGCTATT ACCATTAATCTGACCTCCACCCCCCTAGGACGAATAGGGTTGAGAGAATA TGAAAACTTATTCTTCATAAACAGAACAACGTTCATAACAACATTTCATC ATTATGTTGCATCTATCTCTTTTTGATAATTCTTGACTTGAATGATGGTA GGTTAATCTTTTTTCAAATTAGGATCATGGCTAGCTGTGGGTTTTCTATG GTGGCTAATACTCATTTCACACGGTGAAAAGTGTTTTACAAACGTAACAA ATTTCACAGAAGCTTTTTTGATGTCAATAGAGACATCAGTTACAATTGGT TACGGTACCAGGCAGATCACTTCGGAATGTCCTCAGGCAGTTCTACTTTT AATCATTCAAGCGTCACTCAGTTGTTTAACAGATGCAGTCATCATGGGTT TAATTTTCACCAAGGTGGCACGTCCAGGAAAGCGACAGAGTACCATAGTT TTTTCAGAGAAAGCAGTTGTTAACAAAAAGGATGATAAATACTGTCTCAT GTTTAAAATTGCTGATGTACGAAAACGCCAACTTGTTGAGTGTCATGTGC GGTTGCATCTATTTCGAAGATATAAAACTTTAGAGGGTCAATTCCTCACC CAACAAGACCAACTGCGAGTGGGTATGGACTGGTATAACATTCGTGATGA CAGTGATAGACTCTTTTTAATGACACCTTGTAATGTAGTACATGTAATAG ACAGGAAAAGTCCTTTTTATCATATTTCTAAAGAGAAGTTGATGGCTTCA GATTGGGAATTGGTTGTCATTTTAGAAGGTATTGTTGAAGCAACAGGTTG CACATTACAAACACGTACATCTTATTTAGCTGATGAAGTTATTTGGGGAT ACGACTTTGTTGAAATGGTATGTTTGCCCTGTTTTTATATATTTTATAAG GTTTATTATGTCCCGTCTCGTCTTTCTCTTTGATAATTCCGTTGAAAAAA AGGAAACTTTAAATTACCTGTCATAAGAAGAAGGAGTTCTTTCTATTTCA ATACCATAATTATCAATGTTTCTTTCTAGTGTGCAAAAGTTTCTCTCAAA CTGGCAAGTAGTATAATGAAAAAGTGTAAATGGTTCTAATGAGACTCTAG ACTGCTAAATAAAGGAGCAGGCATCCTCGTAAATAAAAGCCATTCATATT TTGTTTCTCTTGCATTGACTACACAATCTCAAACTTAAAATTCATGCAAT AGATGAGTTAAGGGCTAAGCATTTGCTACTTTCAGTTTTATAATATTTCA TAATTTTCATCTCAGGCTGATGATTGGACAGAGGACGAAGGTATTCTTTA CAATTTGGCTGACATCAATAACATAGAACGTTGTATGTACAACATGCCAG AATGCAGTGCGTCTTCATATTATAAGAAAATTTTGAAAGACCCAGACCCA AATGATGTTTATGGAGAACAGGATGAGCTTTGGGACGACGAGAATTTTAT ACCACCCGGTTTTGCCACTGGTCGAGTTTTACCAACTCATAAAGAGTTAA CCACAAGTGATAATAATTCTGTATTTTCATAGACGCATCAACAAAATTTA GTATAAAATTTTAAAATTCATATTTTTGTGTAAGATTTTATTTGGGTCTT CTAAACTTTTTGAATCTCTCAAGTTGTCAATTTAAAATGTTAAATGTATA AGGAAATTGTAAATTTTTTAAAAATATATATACAATTTTTCTTTTCCTGC TTTAGTTTTTAGCTCGAATACTTATGTTTTACTTTTGCCATTGTTTTTAC ACAACACCTTTTTTTTAAATGTTTTTAGCAAGAAATGGGTATCACAGTTT TATATATTATCATGTATTATATGAATTATGCATATAAGTTTAAATTGTAA ATTTTAAAGCATTGATATAGAGGAGATTATAATTGTAAATTAAATTGTAA TCAGCACACAAGTTTTTATTTTTTTTAAGATTACTTTTTTGAGAACAACA ATCTACTAAGCTACACCCAGGCTGTAAACTTTTATTTTGATATTTTAGGT TTCTGGTTTACCGCCTGGCCTATCTAAAGCGATTTGCATTCCAATATCGG TACTGTGCCTGTCTAGATTTTTTCGAAGCTGAGTCGATGTAATTTTGTAA CTTACCTACATACATTTATGATTAAATTTGTTCGTTAACTTTGAATTTTA ACCGTTATTGTGCCTGTCTAGATTTTTTCAAAGCTGAGTCAATGTAATAA TTGTAAGATACATACATTTATGATTAAATTAGTTTGTTAACTTTGAATTT TAACCGTTTTTATACATATGTTATATCACCATTAAGTAATTTCTGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004428TCONS_00004428Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004428-proteinTCONS_00004428-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000044supercontigsc0000044:701936..705382 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
KCNJ5PREDICTED: G protein-activated inward rectifier potassium channel 4 isoform X1 Homo Sapiens
KCNJ4inward rectifier potassium channel 4 Homo Sapiens
KCNJ12PREDICTED: ATP-sensitive inward rectifier potassium channel 12 isoform X1 Homo Sapiens
KCNJ11ATP-sensitive inward rectifier potassium channel 11 isoform 1 Homo Sapiens
KCNJ14ATP-sensitive inward rectifier potassium channel 14 Homo Sapiens
KCNJ2PREDICTED: inward rectifier potassium channel 2 isoform X1 Homo Sapiens
KCNJ1ATP-sensitive inward rectifier potassium channel 1 isoform a Homo Sapiens
KCNJ8ATP-sensitive inward rectifier potassium channel 8 Homo Sapiens
KCNJ6PREDICTED: G protein-activated inward rectifier potassium channel 2 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.51 7.76 39.46 43.34 7.44 6.09 6.75 6.79 5.52 5.74 5.79 3.5 4.78 3.81 2.83 3.34 3.35 3.18 3.08 3.29 3.01 3.2 5.29 6.33 7.72 8.39 3.91 2.24 8.36 7.89