XLOC_002444 (gene) - C. hemisphaerica

Overview
NameXLOC_002444
Unique NameXLOC_002444
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000044:541256..543745+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002444 ID=XLOC_002444|Name=XLOC_002444|organism=Clytia hemisphaerica|type=gene|length=2490bp|location=Sequence derived from alignment at sc0000044:541256..543745+ (Clytia hemisphaerica)
CTCGTTCTCAAGTGACAATAACGTAATAGTCAATTTTATGCATTACAAAA
GGCAAGTCTCTTCCTCGAACAAAAATTCCGAAGCCTCATTTCTATGTAGG
AATGACGTTATCCTATTATTGTCTGCTTTACAAATGGTATGGCTTTTCTT
TGATTGGAGATTCTatagcctcgttttcaaacaagaATGACGTAAGGATT
ACCTCAATCAAGGAGTATAAATTTGGGTCCTCGTACTGCTCAAATCATTA
CAGAGATAGATCGATTCTGAAGAAACTAAGAAGtcaaaaagataaacaaa
caaattcgAAGAAAAGGAGGAGTTTGTATGaacaaaaaacttttcgaaGT
TGAAGCTGAATAAATAATCTTTGTTGTCAGAACATTTCGCTGCATCTAAG
ATATTGAACGTTTTTATTTGGATACTAACTAAATCAAGCGACAGAAAACA
AGGTAATATTTCGactctaattttgaattttgaattgacTCCAAACTATG
GGATTGAATTCAGATTacacccggggggggtactaggacaAAATGGATTA
CGGGGctgcgccgctggtcagggtacctttttcaaccTCCACGGGTCCCA
GGTAGGGTtaaaattctgcattttagaggTGAAAGTGTTGACAAAATATA
TTCtaaacttgtgaaaaaaatcaagaataattatttttgtgCATTGGAac
taatgttcaagctctatcaatccttttacctaagtaatccaaagaaataa
aattatgacggattattgtcgtttatatgttcatgtttTTCTAATGGTCA
CACTTCTCCTTTGAAGTACAGGACCGAACAATTATCATTGATAATCATAG
AACTGTTATAAATTACAGCTAATTGAATTGTCAAAATACAATTCCAAATT
AATTTAACAATAATTTTTAGGAGTTTTTGAAAGCTTCCAAGTCTGTTGTT
GTATCATAAAGCAACCGTAGCACAAAGATAGTGTtagcttctgctcatcc
tcttacgaaaaagttttttatataaggaattAAGCTTATATAAGGTCTGC
AAATTAGACTAAGGTACTAGATGCTACTATGCGCAAACCAGTGCATACCA
TCAAAAAGACTTGTTGATTGTATATTCAACTGAACAAGTATGTATATGCA
TACAGTTAGTATATTGAAAATTAATGTAAATGTAAATTCATGTTTTACAC
CATATTCATGTATACCGTagataattttatttttcgtttgATTTCCAGAT
AAAATGGGAAGCGACAAGGATGCAAAAAAGGAGCCAACTGAAGCACAAAA
ACGTGTCGCGAAAgcgaagaaagaaaaacaaatgaaaggTTTCATCGCCC
AATGTGTTCAACAAAACCAAAACGTGGAGGACGAGGAGAGACGTATCCTG
TCAATATTACGTCAAGGTGGACTCGATTATCAACCGAATCCTGATAACTT
ACACGAAGcggcgaaaaaaggactggatcATCAAGTCATTGCGATGTTGA
AGAAAGGATTTGGCGTTGATACGTTAGATAAAGACGGGAATACGCCGTTG
TTTTACGCAAGCGAAAATGACCGTTTCCAAACAGCCGTTATCTTGCTTGA
TTATAAAGCTAACGTAAACCATAAGTCAAAACATGGCTTCACGCCGTTAA
TGTACGCCGCATGGAAAGGCCACGTCGATTTAGTATCATTACTTATAAAA
CACGGCGCTGACGTTAAAGCCGTCAACGCAAACAACGATACGGCGCTACA
TTTCGCCGCTTTATGTGGGTTTTCTATGGTAAGCTTGATTTTACGTCAAG
CGGGAGCTGAGACAGACCCTAAGAACAGTAAAAAGAAGAAACCATTGGAT
CAAGGAGAAACATTTGTTAAAGAACTTGAATTAACTCTGACAGAAAAAAT
CCCAAAGGACAGTTCGATTGAATTTCAAGAATCGAAAAGTCTTTTTGGTA
TCAGAAGGGTAGCACGGGAAGTAGCAAAATATGCTGACTcatgaatgaaa
aaaactttatagATTTTTTGATGCTACAAACTACTGTAAACTTCTTGTAT
GCATTGTACTACTGtagtatattttattttcacccaatttcttgttaata
tttatttttaaaatattttcgtcggaatgcgggtgaaggaaaaatttttt
tttttctatttttgataacttaagatcattgaaatgaaattttaaagata
actttaatgtacaaacagtatgaagtaagccctgaatactaatacTAATA
AAGACTATTGAACCCTAACGATCCTTTTCCCGAAGCACCCCCTGCCCGAA
GTTACGGATCGCTTTAATAAAGATTAAAGTTTAAGATTAGAAGAAATTAA
GCCGTCAATCCGTCCAATCGTCAAGACATTCTTAACTTAAAGGACAATAA
CATAGTGAACATTCtttaagtacacgttttttataagaacatccaaaatt
tctgaagCCTTTAGATGTCCTTAACTTTTccagtttcaag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004369TCONS_00004369Clytia hemisphaericatranscript
TCONS_00004370TCONS_00004370Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
Ankyrin repeat proteinTCONS_00004369-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000044supercontigsc0000044:541256..543745 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.5	0.4	1.06	0.53	210.9	147.58	50.89	60.29	62.72	149.3	46.13	14.74	68.22	45.27	5.96	5.5	3.28	4.82	182.98	252.43	62.96	57.9	39.74	54.56	194.17	282.2	4462.27	3454.49	86.65	51.81