XLOC_001949 (gene) - C. hemisphaerica

Overview
NameXLOC_001949
Unique NameXLOC_001949
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000028:858043..866287-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001949 ID=XLOC_001949|Name=XLOC_001949|organism=Clytia hemisphaerica|type=gene|length=8245bp|location=Sequence derived from alignment at sc0000028:858043..866287- (Clytia hemisphaerica)
CGAGAATATAGTAGTAATCTTTTTAAAAGAGCTTCGATAGGTAAGTACCG GTAAAAATTATAAGCCCATAGCCAAACTTGACAGAGAGATCTATACCTGA CTACTTGGTTTCTAAAGAAAACATAAAAGAAAGGCTCTCTATATAAGAAA GAATGGAGAGAATAAAATCCTGGTTTGGAAGATGCTTTCGAAAGAAGAAT CAAGAAGAAGGCAGTCCAGAACAAATCACCAAAAAGATGACACCTTTACC AAAAGCTGTTGTGGCTATTGTCTTCTCAATGATTGTAAGTCACTCTTGTT GAGCAATTCTTATTCGTCTCCCTCCTTCAAGATAACGCGGTCGTACCCAG CTGACACACAACGTTCGCTCAACGTTCATCTAACGCTAGATGGACGTTAT GAACATTAGATTACCGTTGAAACAACGTTGTGTACCAGCTGGGTAGGTAA ACTCGAACCCAGACCCTTTCTTCTTATGTTTCTGACTCTTTTGCACTCAC TCAGAAAAATTAAAAAGTGGTGTAAGTGGCTCTAAATACGTCCCCCAACT TCTACCTGCCCTTGACCCAATAATCATATAAATATGGTGTGATATCAGGG TGATCAAGGAAACTTTGAAAAAGTTAAGCTAGCATGCTTAGCAACTCCAG GCCTGGCCCGTACCAGAGACAAGAAAAAAAGGAAAATGCCGGCCACGGTA GATGTAAAAATAGTAAAATTTGCACAAAAGTAACAATATCAAAAAAGTGA AAAATTTGATGGTTTTCCAATAATTTTGAAATGAACTATGGGGCATTGGA AGTCATACATAAATTTCAGCAAATTTGCGCCTCTCCTGTCTACGCTACTG TTACGAATGCGACATTTGTGCGCTACTTTTCAACTTTTGCGTGTTTTACT TCTGTAAGACCACATTTAAACATTTAAATGATGTGATGTTTTGATTAGGT AAGCTATTTGTATCTGGCAGGCGGATGTTAATCGCTTTAGGTTATAAAAA TAGTGGGACGCATTGTATCGTTAACTTATTTTAAGTTTGCTGGTCGTAAA AATATTAATAACTTCCAATCTGAGTTGTTATATTCATATTTGCCGAGATA AGACACGTTTTCCAAAATTCGACAATTTGGCGGAAGATAAAAATTTCTGT TTCTCTCTATTATTAAGATAGCTAAGATTATGGTAAAAAAATGAATTTAT AGAACCATAAAGAAGGATGAACCAAATCCAAGGATGAAAGGTGACTTATC ATTTATTGGTGAACTTTTGATTGATGTCATAATAAAGTCTGGTTCATTTT CTTCTTTGTTTTAGTTTTTCGCTGCAATGGCTATTACGATGGTTTTCTCC TTTCTTCCAAAATTGATCAAGGTACCGTGGTAATTATTCTCAAAATTCAC CTTTGTTTTTTTCTTTTCGGAGCTTATGTTAAATTTCACGGCCTGGCGCA ATGCATCCTGTGTATCTCATTATTAGTATTCAGACATTTATGTATTCCAA CAATCATTATTTCTTTATTTTTTCAGTCCTTTGGAATATCAGAGGTAGAA ACAGGTACTTTGGTTTACTTCTTTTAAAATATACTATCTGGTAGTTTTTC GTCTCCAAATCGACTTATTATTCATAAATGACCTCATAGGATTCAGTTCC TTATCCCTAAAACCTTTGTCCACTTTAATAATCTTAGCTCAATAATGCAA ACAATAGCTATTTTACCAGCAAGCTTGTAAATTTGATTTCTAAACCCCTG TCTTAAAGATCCGGCCGCCCCACTGGAAAACTTGCCAAAAATTTCGTCCT TTTTGGAAAGATACCCTAAAATTTCAAGATCACTGGGAAATTGGCTTTGT TTCCATCCTAATAAAAATCAATGGAAAAATTGCACTCCAAAACCATTGAA AATCATCCCCACTGTTTTTTTAAGTTCCTCCATTGCTGTCAGACAAGATA TTTCTTATGCCACCAAAACGGTAACAATTTATTATTCAATTTTTCTATTT TCACAGGTTATTATGCTGGTTGGGTTGCAGCTTCATTTTTCATTGGACGC ATACCCTGTAGTTTTTTGTGGGGTTGGCTATCAGACGTGAAAGGAAGACG TTTCTCAGCGCTGCTTTCCCTCAGTGCAATGTCAGTCACCACTTTACTGT TTGGTTTGAGCAACAGTTATTATTGGACTTTGATATTTCGTGGTATTCAA GGCTGTTCTAATGGAGTTATCATCATTTGCAAAGCGCTCATTTTCGTCAT TTGCGACGATACGAATTTACCGCTAGCAATGTCAGTTATAATGGCTTCTT ACAATGTTGGCATCATTATTGGACCGAGTTTAGCAGGTATGATGGTATGA TTTGTTTGAAGGCGTGATCTTTGATTCTAAAAGTGTGATGCGTGATCTAG GATTTCTAAAAGCGCGATGCATGATTCATAAGAGAAATTTTTCTTTATAT ATGTTTAGTTCAAATAAAGTCTTAAATTATTTTTTACGTAAAGTGTTCCA ACCTCCTGGCCCATTCTATGATCGAAATTTTATCTTAACATTATGTCTTT CTTTTTTTTTTCAGGCTTTTTGGTTTTCCCTCATGAGCAGTACCCCTCAA TTTTCTCCGAAGGTACGAGTTGAATTCTATAATTTAGAAACTAAGTGACA AATTCCATCAATTGCAACCGTTTCATCTCCTCCTCCATATAACAATCATT TTTGAAATACCCTTTACAAGGACTGACACGTGGTGTGCATCTTCTTAAGA TTCTCCTCAGTGGAGGAGGTCATTAATAATATCTAGGGTAGCTAGAGACA AGAGAATAACTTTTTTCATCTTTTGGGGGTTTTTTATAAGGAAAAGCATG GACCAGTTCGATTTTTCCTTCTATCTTCAGTTGCCAATCAAATGCCAATA ATTAATGATGATTCTTTTGATTACAATTATCTTATTCAGATAATATCTTC AGCAAATATCCCATCTTGTTTCCAAACATGATCATCGCCGTTGGTTTCAT CGTCACTATCTTCCTTCTCTTCAAATGGATTCCCAAAGATAAGAAAAAGT AAGCTGGCAAACTCATGTTTAGTCATTTCAAACCTCGTTTCCTTTGTATT ATTATCCATATAGCGGTCATTAAGTAAGCCATTAAAGATTCGAACGGCGG GCGGTATTGAAAGGTTCTATGACTCAAATAGTCATACCCGCGCTGAGAAA ACTAAGGCGTTGTGCTTCAGAGGGCTGAAATATCATTAACCGCCCTGGTT ATAGGGCGATAACGTCGTTTTCGGCCCGCTCGGAACTTTATTGAAGTCGT TGCATTGAAGTGGCGAGACTAAACCGACGTCAGAAAAAAACACTTTTTGG TCATTGGCGGCCCGCTTGCAAGGGTACTCAAAACTTGTTGAAGTCATTGC ATTGAAACGAAAAGACTTGGCTGACGCTAGAAAAAACATTGTTTGAATTT CCGATATGGATAATAATAGTAATAGCGTTAAGCTTTCGTTCGTTGTTGTT ATTTTCTGCCCGCGCAGTTTGATTACAGCCCTCTAGTGCCATTTGCGCCC TCCGCTTCGCGTCGGGCCCAAATGACACTCTCGGGCTAATAATCAAACTG CGCGGGCAGAAAATAACAACAACGACCTCAAACTGAACGCTATTGTTATA TTATCGTCTTTTTCATGCTTACAGAATGCGCCAGATTATATTCTCTGGCA TCTATCAGTAATGTAGCTGGGGATACACGGGAACGAGATTGAGTTATTTC ACTAATTTTTGAAAGACTTAAAGGGATTGAGAGGATTTTTTCATGAAGCT TACATCTTTAATTGCAAGTTTCTTATTAGGGAACGGACTGGTATTTCGGT GAACCCGCCATGACGTTTTTTTGAATACACATGTCATACAATATTCTGTA CCAGAGCGTAGCGTAGTACGACAATGAATTTTGAAATTTCCGTACATATC GGGTCTCTTCACGGACAAGTTATGCAAGGGTCTATAATTAAGAATGATAT GGGCGACCCACATTTTAACCCCAGGCAACCATTCGTGAATTTGCTTAATT TTTCAGTCAGGCACTGTTAATTAATCAGAGAGAAAGAAGTAAGATTTCCT TTATTTTCTATGATTTTTGAATCTTCGTTCACAGAAGTGATATGTTTAAC GAGAAGAACTATCTGCTCGATCCAATCGATAAAACGAAGCCTCGATACGA TAATGTCATGGATGAGAGCATTCAAACTTCAGACGATTCTGTCGAGTCAG CACTTTCTACAGATGATTATATGAACGTCTCCGTGAAACTATATACTGGT GACGGTCTAGGATATTTCCAAATCATTGAACCAGATGCATTCATGATTCA ACAACCAAATCGTAAATTAACATTGAAAGAGAAATGGAACTCGTCAAAAA TGAAGCAAGTATTGAGGTAAAAGTGATCTCAACTTCTTCTCAATTATCTA TGCTATTCATGACAAAAATTGCCACTGCTGGTAGAAATCTTAAATACAGA GTATCTTTATTATCTGCAGGACTAAACGATTACATAACTTCGTCAGAAAT AACACATCATCTTTCTTCAATGAATACTTCGGTCAACTGGTCTTTTTTCA ACATAGGCCTTTTTTTACATAGTCGATTACCCTCTTTCCAGCTATACAAT CTAAGCTTTCGTTCAAAGTGATCCTTTTAGCTTCGTATTTGAGGATTTTG ATTAGTGAAAATGCTGTATCTCTCCGTATACAATATATGAAGGGTGAGTA AACGAACAGTAGAGTCTCGTGCGTGTATTTTTGATTCTTGGATTTCCTTT CTAATTTCAGCAACAAGTGGTGTATGGTGTCATGTTTGTTGTATGGGATG TGTGCGTTCAATTCAGTTGGTGTCGATGAACTGTTGCCGCTCTTCTTAGC TTCATCACGTGAATACGGTAAGCGGAAAGAAGTATTTTTGTTTTTGTTTG CTCTGGGCTCAAATTATGCCAGTTATCGTTGTGCAGCCCCTTTTTCGCAG ACCCGGTAGGATTTTTACAGCTGGTCGGCATAAAAATACTGGACTGAAAC TCGATGGGAATTGATATTCCAATATTTTTTATGCCTGGGGATTTCAATTC TTTTGTTTTTCAAGTCGATATTTTGGCCAATCTTTCTCATGCAGGCAAAT ATGTATTAAAAGTGTATTATTTTTCAGGTGGATTGGGTATGACAACACGT GACATTGGTTTGGCTTATCTCATCTCAGCAGCAGTCATGGTCGTTCTTCT TCTTACTTTGTTGACATGGGTATGTATCCAACATTCCATTTGGACACCCC CTTTTTACAGACCCGATAGGATTTTCTCAGCCAGAAAAATAGCAAAATGT TTTGCAGTAAGGATTTGTTTATTTGATTAATCATTTTTTTATAAGCAACT AGGTTGCTAAGGCTCGAGCCCTGAAATTAACCAAATCTTGTAAAATAAAA GCTTTTTAGATAATCTAAGGCAAACGATAGCCTTTGACCCAATAAGCATA AATATGGTATAATATCAGGGGTGGTCAAAGAAAACTTTTTCACAAAATGA GTTAGAATGCTAAGCAACCCCAGCCTCGATCCGAAGATTGAGTTGTTTAT AAGAAATGTGTACAAGTGGGGACAAAAATTGTATAGTATAATAACCAACT GGGGACGATATTTTGCCCAACTGTTCCAGATCTAGGGGTTCTCACCGGGT ATGTAAAAAATTACACTCCCAACCCTAGACCTGACCTAACCCAAAAATGT GTATGTTAATCGGGGACAAAAATTGGAGTATAAATTCCAACTGAGGACGA CATTTTGGCCGACTTTTCCAGTTGGAGGGGTTCTCACCGGGTATGTGAGA AAATCACACTCCCAACCTCAAGCCCAACTCTCCCCCCTAGGAGTGATTCC AATACAGTGGAGTCTCTTTGACTCGAACAAGTCTCTCTATAACTCGAATG TCTCCTTCACTCGAACAAGTGTTATGGCCTCTTCTGTTAACAATGCGTTA TAAAAAACTTTCTCCATAACTCGAAATTTCCAAATTTGTGTCCCCCCTTG CTTGTTCGAGTTATGGAGACTCCACTGCTGTTATGCGTGCTGTTATGCTC CACTGCACTAAATTTTGTTTCTTGTCTTAATTTCTTGGTAACTTAGCTTT GAATAATAATAAAGGTATTTTCTTTTCTAGTTTTCAAGAAGATTTGGTGC CAAAATTGTAAGTCTTTCAATTACACTCATTTACAAAACCAGCACATTTT GGCACAGCTCAGGCAAATTTGCCTTGTTCTGTGTATTAATTAGTCGCAAT TTTTGACCAAATTTCAAATTTATTTTCTGATGAGGCCCCCAAAACGGTTT TTCTGGTTGCATGATTGAGTCTTTTTTCGTGTGTTAGCATGATTAGCGTC TCTGCTGGAGAGCCTTTCTTATGATTTGTAAATTGTCATTCTCATTTCAG CTGATGCTTGTTAGTTTAATTGGATTTGGATTGGCTGTACCTTTCATTCC ATTGTCTGGCTTCATCCAAAATGAGTAAGTTATTGTTTTATACACGTTTT TTTTTGAAGAAACTAGTTTTACCAAGCAGCCTCAATGTTTCTTAAGAAAT CGGTCTTTTGAGCCTTAAATGTTTCTTACATGTTTTTAAGCTTTTTGACA TAATCAGCCTCATGGAAGGCTGGATTGGAAGGTTCTTAAGAAAAACCGAA TTAAAAAATGTTATTTTCTCATTCTCAGCCTCAGCATGTTTCTNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCTCAGCCTCAGCATGTT TCTTAGATGTTTCTTAGTTTTTAGGCATTCTGAGCCTCATGTTTCTTAAA AGTGTGTTTCTTAAAATAAAAAAACGTGTACTCTTTAAACTCTTTTAATG TTTGAAACCAGTTTGAAACAAGAAAACAAACCAAATCAAATATGGTTACA ACCCCTACTCACAGACCATGTAGGATTATTCTTCAGCCAGTAGGGGTAAA AATAACGGATTGAAGCTTAAAGGGGTTTGATTTTTTTAATGTCTTTTATG TCCAAGGATTTGAATTCCATTATTTTCAAGTCAAAAATTCATTTGGAATG AAAAAAATAGCACATTATTTAGCAGTGAGAATTTGTTTATTTGATTATTT TCAGTGGGGACAAAAGTTGGAGTATAATTTTCCACTGGGAATGATATTCT GGCCAATTTTTTTACCGGGTCCGTGAGAGGGGGTATGGCTATTTTTCGTG TGATGTCCCTTTTCTTCGCTTTGCTTTTGGGTTGAAATAGAGACGGGGGT GAAATAAAAATTGGTTTCACAATGGTGAACTGACAATGGTGTAGCCCGGG GTCCACTTAAAGCTTTTTTTTATAGACTGGATGGCGCGATTAAGTGGCCC GGTAGTATATGGTAATATGCTTTTGCTTAGGCGAGATTTTAGTTGTTTTT GGAAGGTAAAAACAGTATGAAGCAATATTTTTATTTGATTTTTATTTGAG AATAAGGGATTGCAAATCTGTTAATCGTGTTTGTTTCTCATTTTTGGTTA TATCTTTCAACTCCAAGTAGTTATTTGGATTTTTAATTATTTTTCTTTCA AAATGCCGACCTTGCCAAACGCTCCTAGTCTACTTCAGTGGACTCTGCGT CATAAAAAAAATATCAAAAAGCAAAGTTCAGCCAAAAGTAGACTCTAGTC TAACAATGGTGGTGAAATTTTGTTTCTTCTTAGAAAAGCACGTTGGGCAG CCCTGGTCATAAACATCTTACTGACCAAGATTCCACAATCAGGACAATTT TTGGCCATCAATGTTATCGTTAACAATACAGTGGGTGAAGATTTGGTGGG AAGTGCAAATGGATTGGCTTTTGGTATCTCTTCTATTGGAAGGTAAGTTA ATTGGGAAAGCTTATATAGTTCGAATTGCAGAGGGTTCGAATAGACGGTA TCGGCTTTCCGAATTCTTCCCGAATGATTACCCATGATGCATTGCGCAAA AGAATTCACGGACGATATTGACTTCCCGTGAATTTTTTCCGCAATGCATC ATGGGTAATCATTCGGGGAGAATTTGGAAAGCCGATATCGTCTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003507TCONS_00003507Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003507-proteinTCONS_00003507-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000028supercontigsc0000028:858043..866287 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
71.22 59.91 18.46 12.52 7.31 6.71 1.92 2.36 3.14 2.96 1.42 2.15 1.23 1.11 0.41 0.5 7.07 14.77 2.16 5.13 9.21 9.05 39.58 38.1 10.1 10.85 2.4 3.36 42.64 36.61