|
|
Sequence
The following sequences are available for this feature:
transcript from alignment at Sc0000050:1116784..1122908- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00063149 ID=BlTCONS00063149|Name=BlTCONS00063149|organism=Branchiostoma lanceolatum|type=transcript|length=6125bp|location=Sequence derived from alignment at Sc0000050:1116784..1122908- (Branchiostoma lanceolatum)
GGAGATGTTTGACCCAGCGCCATTGAAAACTTCCGGGTCATCTGATCGGG
ACTTCCTGTTTGCTGGAAGTAGCAAGCGGCGTGGCCTTGAAAGGTTTTCG
TCCTTTCCAAGACCTCAAAATTCGCGGTTTTAGACAGCCGATTCGTGTTT
TCTGTGCAAGGCTAGGGTTCAAGTTTGTTCAGGTAAGATGATCTGTTGTA
TTCTGACACTTATTGTAGATTTGAGAGAAACGTAATTAGGGTCTGTGAGG
AGTTATAGGGGTTTTGTTGACAGGAATTTTTGAGATTCTTTGTCAAAGGC
AAGTGAAAATGCAACTGTTTTAGTATATTTCGGTCATAGAGTAAAGAAGT
TTACTAGTAATAAATAAATAAAGATTGTGTAGTTCAATGGTGTGTAAAAA
ATTCAAACTGGTATGAAGAACGCAGTTGATATTTATAAGGTGCACTCAAA
CTCCCTTCGTGCGCCCCTGTGCTGGAAACTTTCTGCCATTCTAACAGCTG
GTGTTCATTATGGACTGCTTGGAATTTCACAGACAATTCTGTAACTGTTA
GCNGTGTGAGGAGTGCAGCAAGCAGTTCAGTCAGCTGGGTAATCTGAAGA
CACACATGCGGACTCACACAGGGGAGAAACCCTACAAATGTGAGGAGTGC
AGCAAGCAGTTCAGTTACCAGGATGTTCTAAAAATCCACATGCAAACTCA
CACGGGTGAAAAACCCTACACGTGTGAGGAATGCCGCAAGCAGTTCAGTC
AGCGGAGTAGCTTGAAGAGACACATGCGGACTCACACGGGGGAGAAACCT
TATAGCTGCGAGGAGTGCAGCAGGCGGGTCAGTGAGCTGAGCAAACTGAA
GTCTCACATGCGGACTCACACAGGTGAGAAACCCTACAATTGTGAGGCAT
GCAGCAAGCAGTTCAGTCAGCTGGGTATTCTGAAGACTCACATGCTGACT
CATACAGAGGAGAAGCGTTACAGGTGTGAGGAGTGCAGCAGGCAGTTCAG
TTTAGCAGCTCATCTTAAGAGTCATATGCGGACTCACTGGTGAGAAACCT
TACAAGTGTGAGGAGTGCAGCAGGCAGTTCAGTCAGCTGGGTAATCTGAA
GAGACACATGCGGACTCACACAGGGGAGAAACCCTACAAGTGTGAGGAGT
GCAGCAGGCAGTTCAGTAACCTTGGTAATCTTAAGAAACATATGCGAACT
CACACGGGTGAGAAACCCTACAAGTGTGAAGAGTGTAGCAGGCAGTTCAG
TGAGATGGGTGTCCTGAAGAAACACATGCGGACTCACACAGGGGAGCAGC
CCTACAGATGTGAGGAGTGCAGCAGGCAGTTCAGTGACCTTGGAAATCTT
CAGAAACACATGCGAACTCACACAGGTGAGAAACCCTACAAATGTGAAGA
GTGTAGCAGGCAGTTCAGTCAGTTTGGTGCTCTGAAGACCCATAAGCGGA
TTCACACATTGGAGCAGCCCTACAGGTGTGAGGAGTGTAGGAGGCAGTTC
AGTCAGAGGGGTCAGCTGAAGAGGCATATGCAGACCCACACGGGAGAAGN
CAGTCAGCTGAGTGATCTGAAGAGACACATGCAGACCCACACAGGGGAGA
AACCGTTCAAGTGTAAGGAGTGCAGCAGGCGTTTTAGGAGGCAGTGTGTT
CTTAAGATACACAGACGAACTCACACGGGTGAGAAACCCTACAAGTGTGA
GCAGTGCAGCAGGCAGTTCAGTCAGCTTTGTGCTCTGAAGAGACACATGC
GGACTCACACTGGTGAGAAACCCTTCCGGTGTGAGGAGTGCAGCAGACAG
TTCAGTACACTGGGTAATCTTAAGACTCATATGCAAAGTCACGCAGGGGA
GAAACCCTTCAGGTGTGAGGAGTGCAGCAGGCAGTTCAGAACACTTAGTC
ATCTGAAGAGTCACATGCGAACTCATACAGGGGAGAAACCCTACATGTGT
GGGGAGTGCAGCAGAAAGTTCAGTGAGCTGGGTAATCTGAAGACACACAT
GCAGACCCATACGGGGGAGAAACCTTACAGGTGTGAGGAGTGCAGCAGGC
AGTTCAGTAGGCTGGATGCCCTAAAGAGACACATGCAAACTCACACAGGG
GAGAAACCTTACAAGTGTGAGGAATGCAGCAGGCAGTTCAGTAGCCTGGC
TCATCTTAAGAAACACATACAAACTCACAGGAGAAACCCAATAGGTGTGC
AGCAATGAGTGTAGCAGGCATTTCATTGAGCCAGATTATGTAACTCATGT
GCATACATGTAATGTGAGCTGCAGTTGTGGAAGTCAAACAGGCAGTTTAG
TCAGTTAATAATGATGAATTCCTACTTACACTCGAATTATCTAACTTGCA
CTGACACGTTGTCAGTAAAGTCAACTCAGTTCATGTTATTCAGGCAACTT
CTTTTTCCATTAAGGTAGTAATGTAGATTCCAAAGGAATTATTCAGTTTC
CTGTGGTGTTGACGAATTTATTTAGTTGCCATATGTTAGTAGTCTTAACT
TTATCAGGTACTTGTTATACCTGTCTATAGTTTGTGTAGGTAGATGCTCC
TCTTCCTTTTATAGTTACATGTAGTTGCATGGGTCTGTTCAGCATATATA
TACATGTTGCAAAGTAAACTTTTCAGTTTTAATTAGTGTTGGTAGAGTAG
ATATTATAAAGGTTTGAGCTTGGATCAAGGATTTCATCCAGGATAGGTAG
AGCCGTTATTGTTGGTTTTATTATTCTGTTACATAATTTGTTCAAGTCAT
TTTTCTTCAATAAAGTTGTTTGCTATACACTTGTTTGCATATATCATTTG
AGGAAGTCGATATTTTTAATAAAGTCTGCACTAATTTATTAACATAGTAA
CCAGACAGGCTGCATAGAAAATACCTTTTGTTGCAAAATTAAAAGAAAAG
GAATCTAAAGTTGTACAGATCTAGTTTATTAGCCTGAGTGCCGGTAGCGG
ATTATTNCTGAAGAGACACATGCAAACTCACACAGGGGAGAAACCTTACA
AGTGTGAGGAATGCAGCAGGCAGTTCAGTAGCCTGGCTCATCTTAAGAAA
CACATACAAACTCACAGGAGAAACCCAATAGGTGTGCAGCAATGAGTGTA
GCAGGCATTTCATTGAGCCAGATTATGTAACTCATGTGCATACATGTAAT
GTGAGCTGCAGTTGTGGAAGTCAAACAGGCAGTTTAGTCAGTTAATAATG
ATGAATTCCTACTTACACTCGAATTATCTAACTTGCACTGACACGTTGTC
AGTAAAGTCAACTCAGTTCATGTTATTCAGGCAACTTCTTTTTCCATTAA
GGTAGTAATGTAGATTCCAAAGGAATTATTCAGTTTCCTGTGGTGTTGAC
GAATTTATTTAGTTGCCATATGTTAGTAGTCTTAACTTTATCAGGTACTT
GTTATACCTGTCTATAGTTTGTGTAGGTAGATGCTCCTCTTCCTTTTATA
GTTACATGTAGTTGCATGGGTCTGTTCAGCATATATATACATGTTGCAAA
GTAAACTTTTCAGTTTTAATTAGTGTTGGTAGAGTAGATATTATAAAGGT
TTGAGCTTGGATCAAGGATTTCATCCAGGATAGGTAGAGCCGTTATTGTT
GGTTTTATTATTCTGTTACATAATTTGTTCAAGTCATTTTTCTTCAATAA
AGTTGTTTGCTATACACTTGTTTGCATATATCATTTGAGGAAGTCGATAT
TTTTAATAAAGTCTGCACTAATTTATTAACATAGTAACCAGACAGGCTGC
ATAGAAAATACCTTTTGTTGCAAAATTAAAAGAAAAGGAATCTAAAGTTG
TACAGATCTAGTTTATTAGCCTGAGTGCCGGTAGCGGATTATTGGGAGCG
GACAAAAAGGCTGGTACTCAGGCTACTAGTTAAATTATGGAGGAGGCCTG
AAAGTTCTCGCAATTGTTTTAGCAAGTTAGAACTGAAAGGAGCTTCACAA
GCAAGTGAAGAGCTGAAAAGTGTCAGCCTAGAAGAAGAGAGATACTCCAT
CTCTGCATTCATCTAATAAATAGAAAAAGCATGTGGCAATCAAGAACAAG
CCCAAAAAAAATTGCTTATTCGGCTGACAAACATAACTTATATAATTTGA
ATAATCAGAAAAAATTACGATAAATTTCCGACCTTGTCAACTATTTATCA
TGCATGGCTCATAAACGCCGTCTAGCGACCAAAACTAGTATTGCAGGAAA
AGCCGAATCCTCCAGCGACAAAAATATTGAAAGGGAGCCTCACTTATACA
TTTGAAATAGCAAATGTCCGTTTGATGCGCAATGTAACCATTGCCAACCA
GTAGAAGTAATTTAACGAATGAGGCCGCTTAATCGTCTGACAAACATGTT
TTGTATAAGTTGTATAATCAGGATATAATACGATAATTTTCCGACCTTGT
CAACAATCAGTCAAGAAATCTCTAGCCAAGATAGGCCTTTCGTATTTTCC
TTTCCAAGCTTTCTCTTTCCTTCACAACTTAGCATATATTACCCTCGTTG
GTAAAAGAACACAATATAGAAAACGTTTTCTTATTGTGACGTTTATTGAG
CAAAACAGATGCCGTAGATGTAGATCACCACGTACAGTATTGAAGACGCA
TGGTTCAAAAGCGCCGCCAAACGGCCAGAAAATATTACTGCAGCAAAACT
GCGTCCACCAGCGGCAAACATTACTTGAACCGCTAGAGGTCCTCATTGAC
ACGTGCAAATTATTTATTATTCACGCAAAGGTACACCAACTAGTACAAGA
AGCAATGATTTGAAGTCTAAAGTATATCCTTTCCTGGCAGTCTGGTTGAT
CTACCGCGACGTCATCCGAAAATTAACTTAATCTTGGCCAATCCTCTCAG
ATCCTCCCAGTTTATGAATTATAGTGATTGACAAATTGAGTCTTAATCAT
GTCCACCTGTGTTACATTCTTCCTGCACAGGTGATCACATGTACAGGTGA
CCTGCATGACAACAATGTCGATGCTTCAGTTACGAAGTGGTGAATCCGGG
AACGTTTAGCGCGTTCAGAAAGACGCCATCCGGCCTTTCATCTGGTAAGT
ACCCTTGGAGATGGTTGTAAATCGATGTGCTGACGCAATCCACACCTCCA
TATCTGTCTGTGACATTTGTGATTTAGCAGTTCTCCATAATACCTCTTTC
CTGCCTTCAAATCTCCAGTTCATCTCATTTTTAGCTACTTAAAAATAATC
ACTGCATTTTCCTCGCACCCGTAGTCTTGCTGTTCACCAATGACTTTACA
AGGGAAGATTCGATCGTGAGTTTCACTATTACATGTCGACCCTCCTACTT
TCATCTCTCTGTAATATAATCAACTTTCCTCGGTGGAGCGAAGTATTCAA
AATCTGTCAGCTCAGCTTGGCAGGCGCATTTCCTAATAGGTACGTAACTG
TTAAATGAATCGTACAAGCTTCAGCAGCTAACATCAGAAACCGTCGGAAA
CACACTTTTGTTATGATTCAGCAGAACAATGATAGTGAGAATGTGATTCA
TTGTGAAGGGTTATTAGAGATATATCTTTTTCAGACCACCCCCCCCCCAC
TCCCTAGGCTCTAACTTGTTGTGAATTCTTTACAGTATCATCTTGTAACA
TTGAGAATCGCTGATTGCCTTTAACAATTATTGACAGTGTTTTACAGCTC
CTGCAAACGATGTTCGAGGTCAACCACAAGGAACTATATCACATGGACCG
AAGAGAGCCGCTAGCCGTTGATGATGTCGACAACAAAAACAATTTCTGAG
AGAAAATCATCGAGAGCACTAGGCACGAATACATAGAGAGCCATAATTTA
TTCACCAATGTTCTCAATCATAATGCGATTTGTGAGGGTTGTTTAATGTA
TACGTGTCCTGCAACTGGCATTCCATATAATGGTGTGTGTATCTAGGTAT
TGTGTCAGTAGTTAACTAGAGTTGTAGAATACTACGTTGTTCAATGTCTG
TCCGTTCTTTTCATGTTAATAAGAACCTGCAATATGCTTTAATTTTAAAG
TTTAAATTGTGCATTTATATCGTTCTTAACAAGAGAACATCACGGTTCTG
TATAGAGGTCTCTTTAAAAGACTTGCATATTGTTAATTGAAGCAAGTACA
TTAAAGCAACGAGTCACCAACACCC
Gene-mRNA-Prot
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00063149-exon-Sc0000050-1564993656:1122727..1122908 | BlTCONS00063149-exon-Sc0000050-1564993656:1122727..1122908 | Branchiostoma lanceolatum | exon |
| BlTCONS00063149-exon-Sc0000050-1564993656:1117865..1117978 | BlTCONS00063149-exon-Sc0000050-1564993656:1117865..1117978 | Branchiostoma lanceolatum | exon |
| BlTCONS00063149-exon-Sc0000050-1564993656:1116784..1117271 | BlTCONS00063149-exon-Sc0000050-1564993656:1116784..1117271 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000050 | genome | Sc0000050:1116784..1122908 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030944 |
|
