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Sequence
The following sequences are available for this feature:
transcript from alignment at Sc0000047:1215677..1220460- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00061160 ID=BlTCONS00061160|Name=BlTCONS00061160|organism=Branchiostoma lanceolatum|type=transcript|length=4784bp|location=Sequence derived from alignment at Sc0000047:1215677..1220460- (Branchiostoma lanceolatum)
ACCTAGGTGCAGTCAAAGGTCAACCAAGGACGGACGACAAAATGTGTCGC
TAATCCAGATTTTTGTACTACTGTATTTAGCTCTACGTAAGTAGCCGAGG
TTGCATTACACCTGGGATTGACGTAAAAGTAGGTACCAAGTATAGTTTAA
TCAGTCAAATTGATTTCACAATACCCTTGTCGTTGCCAGTCAAGAAAATG
TGTCTAACTCCAACGCCCCCCCCCCCACGTTGTGTAACTTTTCTCCTGCG
TTGTTCTAGCCGAGTTGTAAAACTGTATCTGTATCTGTATCTGTATCTAT
ATAGCCGGTATAACCGCCATCAGGCGTAACACACCAGCTTCGCAGGCACG
CGGCGCGGCAGCAGCTGGTCATATTACACCGAACGGTCTGTTACACCTAG
TCTTTGCATATCTGACTGCAACCGTTCTTTAAAGCTACTTAGTGATGAAG
CTCCTACAGTACTTGATGACAACGAGTTCCATTCTACTATGGTTCTCGGG
AAATACGAATTTTTGAACACGTCAATCCTTGGCTGATAACTCTGGTACTT
AAAAGCATGACTATTTCTGGTCCTCTTCTGAGCTGGCATTAGATACTTAT
CAGTCGGTACGTCCACAAGTTTATTAGTCATCTTGTACATCATGCAAAGT
CTGGACATTGTTCTCCTGTCCTCAAGTGACATCCATTGCAGGTCTGCTTT
CATTTTTGTTACACTGGCGCCCCTTTCATAGTTGTTCGTGCAGAATCTGG
CAGCTTGGTTCTGCACCCTCTCGAGTTTATCTATATCCTTCTTTGTGTAT
GGATCCCAAACTGTTGCAGCATATTCAAGGTTTGGTCTTACTAGAGACGT
GTATGCAAGTGATTTTACCTTTGCTGGGCATGCCCACAAATTACGTTTGA
TCACTCCCAATGTCTGTTTAGCCTTAGTTGTTACTTTGTTGATATGGGTG
TTCCACTTTAGCCCCGTTGTTAATGTAACGCCTAGGTACGGGTGGCTCTT
TGCTGTTGCTAGAGCCTGTCCACAGAACTGGTAGGTGGTTACAATTGGGT
TTCGTTTGTTTGTTATATGCATGATGTAACATTTTTCCGGATTAAACTGC
ATTAGCCATCTGCTTTGCCATTCTTCGAGTGTGTTCAAATCTTCTTGCAA
AAGCTGTGAATCACTCTGTGTGGACAACTCTATATATAACAGGCAGTCAT
CGGCAAATAACCTAACATTTGAATCAAGCTGGTCTGGTAAGTCATTTATG
TACAGGAGGAAGAGTAACGGTCCCAGAACAGTTCCCTGTGGTACGCCTGA
CGCAACTCTAACTGGAGCTGAGGCCTTGCCTTCTACCACTACCGTCTGTT
CCCTATTGGTCAAGAAAGCCTTCAACCAATTTAGTGTGGTGCCTTGAATT
CCGTAGTGCTCTAGTTTAGTGATGAGTCTGCTATGTGGGACTTTATCGAA
AGCTTTAGTAAAATCAAGAATTGCTAGATCTACCTGTTTTTTACTGTTCA
GTGCGCCAGCTATGTCATGAGCTGTCAATATAAGCTGTGTTTCTGTGGAT
CGCTTTGCTCTGAATCCATGTTGGTAGTCAGTCAATATGTTGAAACTTTC
TAAGTGTTTCATGACATGACTATGGATAATGTGTTCAAGTAGTTTGCAGG
ATATACAGGTCAGTGATACAGGTCGGTAGTTGCCGGGGACAGCTCTATCT
CCCTTTTTAAAAATGGCACATATATTTGCATCCCTCCAGTCTTTGGGAAT
TTCTCCTGTGTCTAACGAGTGTTGGAAAATATTGGTTAACACAGGTGCTA
TTTCGGTGGCTGTCATTTTGAGGAACCAAGGAGGTATTTGGTCTGGACCA
GATGCTTTAGATGGATTGAGACCTTGGAGCATTTTTTCGACACCATTAGG
GGAAATCACTATGTGTTCCATGGGAGGGGTACAGGGCTGTCCGAGAGTTG
GCATGTTTGTTGTGTCTTCCTCTGTGAACACACTTTTAAACTGTGAACTG
AGTGCCTCTGCTTTTTTCTCGCTATCACTGACAATGGAATTACCAATCTT
TAGAGGGGCTACGCCGACAAGGTCTCTTCTTAGGCCTTTTATGTATGACC
AGAATGTTTTGGGTTTGTCAATTATGGCTTCCCCCAGTATGTCTGCCACA
TATTTTGAATGTGCTGCTCTTATGCTTTTCTGTACGCCCTTCTTAACTCT
CTTGTATTTGTTCATGTCTTCCTCTCGCCCTGTTCTCTTAGCTTTGTTGT
AAAGACGTTGTTTCTTACGACAATGCCTTCTTAGGTTTCTGTTGAACCAA
GGCAGGTTGTATCTGCTTGATGTTGTTTTACTAGGGATGTGCAAGTTCAT
CGTGTGCTTTATTTTGTCTTTAAAATCATCCCACTTCTGTGTCACGGACA
TATCCTCGGTTCGTTTGTTAAAGTTCGTTGCATAATCACTTAGGTCACTC
TTGATGGCCGGTTCATCAGCTTTAGTTCGAATGTACACTTTTCTCTTGGG
TTTCCTGTTTTGTTTGGGTGCAAGGTTGACATCCACCAATACCATGTCGT
GGTCACTTATTCCAGGAACTACTGTGGTCTTTTCGATTATGTTTGGGTTA
TTAACTAAGACCAGGTCCAAAAGATTACCATTCCTAGTGGGCTCTTGAAC
TGTTTGGAATAACCCATGGTTATCCACTAAGTGCAGTAGCTTCTGTGCCT
GTCCTGAATTGCTCTGAGTGTTATCTGTAGTGCTAGCATCCCAATTTATA
CCAGGTGTGTTAAAGTCTCCAAGGATGATCACGTTGTCAGAGTTAATTTT
AGGTCCCATCTTACTTATGGACTTGTCCAGTTCATCCAGGCTATTGCCCT
GGTCCGATGGAGGTCTATAGTATGTACCAATCATTAGTGGTTTCTTTCCT
GCTAGTTGAGTCTGTGTCCAAATGATCTCACAGTCTGTGTCTAGATCTGG
CCTGTGTGTGACAATCAAATCATNTAACTGGATGGTTCTCCGTAAACCCA
CGTACTTGACCAATTATAGTTTGATCTGTCAAATCGGCTTCATTTAATAC
TAACCTTGACAGTCAAGAAAAGGTGTCCAACTCCACGGCCCCCCTCCCCC
ATGCACGTTGTGTAACTTTTCTCCTGTGTTCTGTTCTAGGCGAGTTGTAA
AACTGGATGGTTCTCCGTAAACCCAACCGGCGGATCAGGGGGCTTCTGGA
GCTGTGGCCGGGTAAGCGGCGGCTGGGAGTGTACCGCTTCCTGCCGATCT
TCTTTGTTATGGGGGCGGGCATGGAGTGGTTCATGATCAACGTTCGACTT
GGCAGGGAGACCTTCTGTAAGTACCACAAGGTTATGTATGGTTGATTAGC
ATGTTATGTAACGTTACATGTAACAATTAGATATTATTGGAGCCGGTGTC
AACTTAACAGGGTTACACACGGGTAAATTATGGGCCTTTGAAATATTTCA
TGCTTTGTTAGACATAGAAAGTGAGTGTCATGTCAGTGACCTGGAATTGT
GTGAAAGGTTGGTGACAAAAACAAGACTGGCTAAATCCTGTAAGCATGTC
ACTAATTGTTAGACATGGCTACTGTCGTAGTATGGTCACTTCCTCTTTTA
AGAAGCTACAGTACCTGTTACGATTAACATCTCAATGGACTTTTTTCTAA
ACATGACACCCCGATATACCTGCTAGATATACAAATGTTGAGATTTTTGT
CTTGGATATGAATATGATATTTCTTTGTCTCATGGACGTAACAGCTCTCA
ATATCTTATCAAAGGTTTGGATGATGTGATACAACTAAGACTTCTTCATT
GCAGATGATGTGTACAGAAGAAAGCAGGCAGAGCGACAGTATGAGGCTGC
AGGCACAGACACAAGCAACGATCAGTGAACTTAAGTTATGATAACATTGC
AATCCAAGAAGAAAGCACTTTGCCAAAGTTTATTTCATTCAATGCTGACT
GGTTGACATTCAGTACAACCTTGTTCTCTGTATTAAGACACTCAGCAAAG
TGCAGACAGTATCCTTTACAGAAGCAGTTTCATATTCGAGAGATTTGAGA
ACAGCCATGCCTGCAGGAGTGCGGTGGGGGCCGTACTTGCGCTTCCTGAC
AGCCAGTATGCTGTCCATGTTTGCTGGTGCGCAGGTCATGCACAAGCTGT
ACAACCCTGACCTCTCCATCCCTGAGGTGCCGCCAAAGCCCGGGGAACTG
AAGACAGAAGTCCACCAAGTGTGGAAGAGACCAAGCACAGACTCAGAGAG
CAGCAGTTCAGAGGGCAAGGCTTCATAGTAAAGTGTTCTGGTGGCTCAGG
TGACTTGGGACTGGAAGATGTTTGCAACATTGAGATTTAGATGGACATTG
CTATGATAAGGACTTTTTGGGATGAACTAAGAATAGTTAGTATATCAGTT
ACTGTTCGATTCATCTTGGAATACATGTAACGTTACCTTAAATTCATTCA
TGGCTTTTTCTGAGTTAGCTAGTTACCTGTATGGATCAGTTGAATAAAGT
GGAAAAGAGTTGTGACCTTGCCATGTTGTGATTCTGACACAAATTTAAAT
AGCGGTTTGATAAATTTTGTTGTAATAGTTAGCACAAAGTATATGTGCAC
TACTATACCAAAGGAGTGTACAAAAGAAAAGTACTGTAAACAGCTACTCA
GTTACAGGAAGTACACACAAGACAAGAATTGACATGAAAATAAGCTCTTT
ATTGCCATGCAGAATTATCAACTACATCTGGGAGTCAGCCTTCACAGCTC
AGATATAAGAAATATTAAATATACTCTATAAATC
Gene-mRNA-Prot
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00061160-exon-Sc0000047-1564993656:1220333..1220460 | BlTCONS00061160-exon-Sc0000047-1564993656:1220333..1220460 | Branchiostoma lanceolatum | exon |
| BlTCONS00061160-exon-Sc0000047-1564993656:1217145..1217321 | BlTCONS00061160-exon-Sc0000047-1564993656:1217145..1217321 | Branchiostoma lanceolatum | exon |
| BlTCONS00061160-exon-Sc0000047-1564993656:1215677..1216656 | BlTCONS00061160-exon-Sc0000047-1564993656:1215677..1216656 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000047 | genome | Sc0000047:1215677..1220460 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030239 |
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