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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96497_cuf0 >transcript:BL96497_cuf0-protein ID=transcript:BL96497_cuf0-protein|Name=transcript:BL96497_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=164bp
PGLCVDPPTQANTTGPVCELADYPGENCTYPCSPGYYVSSGDVITRTCTE
NGTWTEPDVFCQDCSDPLGVESGAIPDDSIIASSIYSPEYDPYLGRLNRV
GGAWAAKYNTIGQWLQVDLGEMKRVMGTIIQGQGLDHSQWVTSYKLQYST
DRITWTTYAGSDGS Run BLAST on NCBI mRNA from alignment at Sc0000017:735545..741337- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96497_cuf0 ID=transcript:BL96497_cuf0|Name=transcript:BL96497_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=5793bp|location=Sequence derived from alignment at Sc0000017:735545..741337- (Branchiostoma lanceolatum)
ACCAGGCCTGTGTGTTGACCCACCGACCCAAGCCAACACTACCGGGCCCG
TGTGCGAATTGGCTGATTATCCGGGGGAGAACTGCACCTACCCGTGTTCC
CCGGGATATTACGTCAGTTCCGGTGACGTCATAACCAGAACGTGTACGGA
AAATGGGACATGGACTGAGCCGGATGTTTTCTGCCAAGGTACGAAATAGA
ATTGAAGAAAGAACGATATTAATTGGGGCGAGTTTAGGAAATAAATGTTT
TCCTAGAAACTTTTGTACAAAACGTGGCATCGCAGTGGCGCAGTGGCAGG
CTGTTTTGCCCAGAACCCCAGTTCAAATCCAGGGTCCCCCATCGTCTTGT
TGACGTTGTGCCCTTGACAAAAGCACTCAAACGACTATCCCCACTTCACT
CAGGTGAAAATAAAAACGTACCTAGCTTCAGTTAGGGACGTCCCTCGGAT
AGGACGTTAAATGGAGGTCCCGTACGTGTTTGAGGAGAGCCACACTTCGT
TAAAGAACCAACCACGCTTATCGAAAGAGTAGGGTCCTTCGAATTCCCGA
TGTGTCCGGATATGCCGTTTAGGCGGTTTAACAGATGTGGGTGACGAACA
AGCAAAATTTTGTGCCAAATTTTACAAGAAAACTAGTATGTAAAGACAAA
TAGCTTTGCTGTCTATGATATGCAAGGAAGAGATGTCGAAAAAATGAAAA
TAGGGATGATTTAGGACGATTACAAAGAAATTCTACAGCATTTCGGAAAC
AAAAAATGCTCATTTAAAAGAATGTTTTACATTTTCAGAAAAGTTTTGGA
ACTTTTGAAAAGTAAATTTGAAGTCTTCAGGCAACCACGAACCAATATAG
TATTAAAGGCTTGTTATAACCCTAATTTGTGCCAGACTTTGAGGAGCTTT
AAGTGGGAATCTGGTATGTGTTTCAGATTCAAATTCAGACCAAGTAGACG
TAATTCTACCTACTATCAAATGAATGTTTGCAGAATTAGGGGTCTGCTTC
GTTCATAACAGGGTTTGTCCACAGAAGTAGGGAATTGATTTTTTTCATTA
GATGAACGATTGGATTTTGAGCCATATTCAAAATACAATACACGAGAAAG
TAACGTGGGTTGTAATCTGATTCAATTTTACTTCAAAGTTAACCCTATGC
TATGTCTATGGGATACGTTCTTGCGCTGGTTATTGCCTTTTTTCGTTGCT
CTGTTAATTTCCTTATTTGCCATATTTGGGACTTGAGCAGAAATAGCATT
TCGTGCTATGTTAGAAGTTTTAGAAATGTCAAGGTATGATCAAGGAGGTG
GTATGATGATATATATGAACGCCTTTTTGCCGGAGAGGTTATCCTACATA
TTGTCTATGAAATGCATACCGGTTAAGTCTCGAGTCTTTTGTTGGTGCTT
TGTCTTTTCCTTGAAACTAAAACATATTTCGCATGTATATTGGTGTATAA
CGTTTAAGGCTCGTTTGCGATTTATATAAAACATTTGAAATTGATATTTT
CTATAACAAAACTATAACATTAGCTTTACTATTTAATGGAAGTTTGAGAA
GTTCACAAATGATACTATCGATCTGGGTGTAAAAAGAAAATGAGAACTTC
CGTTATTATACCAAGCCGTGCGAAAAACATATTATTAGGTAACATTAACA
TTACCTTTGAGGTAGAACATAACTGATCGTACATTAAAACAAAATTGTAT
CGTGAGATTTCATCCATAGTTCTCTTTCTCATGGGTTTGTTAAAAGTTTT
CCCTTTAGTTTATGACTTAACAATAACTAACTTAAACATAGTTCTTGTCC
TGTCCTCCCAGACTGTAGTGACCCACTTGGAGTGGAATCTGGTGCCATAC
CTGATGACAGCATCATTGCATCCTCGATCTATAGCCCTGAATATGACCCT
TATCTTGGGCGGTTAAACCGAGTTGGAGGCGCCTGGGCAGCCAAATACAA
CACCATCGGACAGTGGCTGCAGGTAGGCATACTTCAGGGGCCGTTTGGCG
CAACGGCAGAGCTTTCGGCTCAGGACCAAGAGGTCCCGGGTTCGAATCCT
GTCATGTAACCGATCTTGTGACCTTGGGAAAGGCACTTAACACGACTTTC
CTCGCTCCACCCTGGTGTAAATGGGTACCTGACTTCGGTTGGGGAAGGTC
GTATTATGGTCACCTGGTGGCGCCGAATTGCAGCCGCCCAGACCCTTGCG
ACAGTTCCACAAAGTGCAAGTGTGGAGCAAATATGTATCTGTTGTGTATT
ATGATCTATTATGTGAAACCTGTAATCCCTGCATCAATTCAGCGCTAGTA
AAGCTGCCGTTGCGGGTAATTTCTGACCAATAAAAACCATTATTATTATT
TTTCTTTATAAACATAACAATTGTTCTGTACATTATGTCCATTTTGAAAA
AGTAACCATGAAGCGGTTCTTACAGCACAACCTTGAAACGATTTCTCTGT
CCGAGGTTTCGGAAACGACTCAGTTTTCTTCATCACGGGAGCCTGGTCGA
CTGCACTACGCTTCAGTTTCAGTCTATTTGTTTCACCAGAAAAACATATC
GCCTGGCGGTGCTTTTCAACGATTTATGGGGGTTTAAACCCCTACATATA
AATACATAGCAACATTAAAGATATCAAATAATGACAAATGATACAGCAAT
GAATATTAACTTGAAAATATAAGTCTTCAACAAAAAAAGAAATCATAATT
AGATGATAACTGAAGTAACGATAACTTAAAAGAGAAGTACTNTTATCCGG
GGGAGAACTGCACCTACCCGTGTTCCCCGGGATATTACGTCAGTTCCGGT
GACGTCATAACCAGAACGTGTACGGAAAATGGGACATGGACTGAGCCGGA
TGTTTTCTGCCAAGGTACGAAATAGAATTGAAGAAAGAACGATATTAATT
GGGGCGAGTTTAGGAAATAAATGTTTTCCTAGAAACTTTTGTACAAAACG
TGGCATCGCAGTGGCGCAGTGGCAGGCTGTTTTGCCCAGAACCCCAGTTC
AAATCCAGGGTCCCCCATCGTCTTGTTGACGTTGTGCCCTTGACAAAAGC
ACTCAAACGACTATCCCCACTTCACTCAGGTGAAAATAAAAACGTACCTA
GCTTCAGTTAGGGACGTCCCTCGGATAGGACGTTAAATGGAGGTCCCGTA
CGTGTTTGAGGAGAGCCACACTTCGTTAAAGAACCAACCACGCTTATCGA
AAGAGTAGGGTCCTTCGAATTCCCGATGTGTCCGGATATGCCGTTTAGGC
GGTTTAACAGATGTGGGTGACGAACAAGCAAAATTTTGTGCCAAATTTTA
CAAGAAAACTAGTATGTAAAGACAAATAGCTTTGCTGTCTATGATATGCA
AGGAAGAGATGTCGAAAAAATGAAAATAGGGATGATTTAGGACGATTACA
AAGAAATTCTACAGCATTTCGGAAACAAAAAATGCTCATTTAAAAGAATG
TTTTACATTTTCAGAAAAGTTTTGGAACTTTTGAAAAGTAAATTTGAAGT
CTTCAGGCAACCACGAACCAATATAGTATTAAAGGCTTGTTATAACCCTA
ATTTGTGCCAGACTTTGAGGAGCTTTAAGTGGGAATCTGGTATGTGTTTC
AGATTCAAATTCAGACCAAGTAGACGTAATTCTACCTACTATCAAATGAA
TGTTTGCAGAATTAGGGGTCTACTCCGTTTATAACAGGGTTGTCCTCAGA
AGTAGGTAATTGATTTTTTCATTAGATGAACGATGGGATTTTGAGCCATA
TTCAAAATACAATACACGAGAGAGTAACGTGGGTTGTAATCTTCAAAGGT
AACCCTATGCTATGTCTATGGAATACGTTCTTGTGCTGGTTATTGCCTTT
TGTTGTTGCTCTGTTAATTTCCCTATTTGCCATATTTGGGACTTGAACAG
AAATAGCAGTTCGGGCTATGTTAGAAGCTTTGAAAATGTCAAGGTATCAT
GATATATGAACGCCTTTTTGCTGGAGAGGTTATCCTACATATTGTCCATG
AAATGCATACTGGTAAAGTCTCGAGTCTTTTGTTGGTGCTTTGTCTTTTC
CTTGAAACTAGAACACATTTCGCATGTATGTTGGTGAAATGTTTGAAATT
GATATTTTCTATAACAAAACCATAACATTAGCTTTACTCTTTAATGGAAG
TTTGAGAAGTTCACAAATGATACTATCGATCTGGGTGTAAAAATAAGATG
AGAAATTTCGTTATTATACCAAGCCGTGAGAAAAAACATATTATTAAGTA
ACATTACCTTTGAGGTAGAACATAACTGATCGTACATTAAAACAAAATTG
TATCGTGAGATTTCATCCATAGTTCTCTTTCTCATGGGTTTGTTAAAAGT
TTCCCCTTAGTTTATGACTTAACATTAACTAACTTAAACATAGTTCTTGT
CCTGTCCTCCCAGACTGTAGTGACCCACTTGGAGTGGAATCTGGTGCCAT
ACCTGATGACAGCATCACTGCATCCTCGATCTATAGCCATGAATATGACC
CTTATCTTGGGCGGTTAAACCGAGTTGGAGGCGCCTGGGCAGCCAAATAC
AACACCATCGGACAGTGGCTGCAGGTAGGCATACTTCAGGGGCCGTTTGG
CGCAACGGCACAGCGTTCGGCTCAGGACCAAGAGGTCCTGGGTTCGAATC
CAGTCATGTCACCGATCTTGTGACCTTGGGAAAGGCACTTTACACGACTT
TCCTCACTCCACCCAGGTGTAAATGGGTACCTGACTTCGGTTGGGGAAGG
TCGTATTCAGGTCACCTGGTGGCGCCGAATGGCAGCCGCCCAGACCCTTG
CGATAGTTCCACAAAGTCCAAGTATGGAGCAAATATGTATCTGTTGTGTA
TTATGATCTATTATGTGAAACCTGTAAACCCTGCATCACTTGAGCGCTAG
TAAGGCTGCAATTGCGGGTAATTTCTGACCAATAAAAACCATTATTATTA
TTATTATTATTATTATTATTCATAAACTTAACAATCTTTTTGTACATTAT
GTCCATTTTTAAAAAGTAACCATGAAGCGGTTCTTACAGCACAACCTTGA
AACGATTTCTCTGTCCGAGGTTTCGGAAATGACTCAGTTTTCTTCATCAG
GGGAGCCTGGTCGACTGCACTACGCTTCAGTTTCAGTCTATTTGTTTTAC
CAGAAAAACATATCGCCTGGCGGCGCTTTTCAACGATTTCTGGGGGTTTT
AACCCTACATATAAATACATAGCAACATTAAAGATATCAAATAATGACAA
ATGATACAGCAATGAAGATTAACTTGAAAATATAAGTCTTCAATAAAAAA
AAGAAATCATAATAAGATGATAGCTGAAGTAACGATAACTTAAAAGACTA
GAAATACTGAATCAAAACATAATGATAGAGAGTCTTCAACAAACAAAAGA
AATCATAATTAGATGATAACTGAAGTAACTATAACTTAAAAGACTAGAAA
TACTGAATCAAAACATAGTGATGGAGAGTCAAGACAATGAAACAAACTTA
GATGTAACTCCACAGCACCTGACTACTGTCCTAAATTTTGGCCAGGAAAA
TGTATCCATGTTGTGATGCTTTGACTTGGTATTTCATGTATTTGCTACAT
TGATAATATCTCAATATACGTCAAAAGCGCCATGTCTATTGCCTTTCAGG
TTGATTTAGGGGAAATGAAGCGCGTCATGGGCACCATTATTCAGGGTCAA
GGTCTTGATCATTCCCAGTGGGTGACGTCGTACAAACTCCAGTACAGCAC
AGACCGGATTACTTGGACGACATATGCAGGCAGCGATGGCTCA Coding sequence (CDS) from alignment at Sc0000017:735545..741337- >transcript:BL96497_cuf0 ID=transcript:BL96497_cuf0|Name=transcript:BL96497_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1476bp|location=Sequence derived from alignment at Sc0000017:735545..741337- (Branchiostoma lanceolatum)
CCAGGCCTGTGTGTTGACCCACCGACCCAAGCCAACACTACCGGGCCCGT
GTGCGAATTGGCTGATTATCCGGGGGAGAACTGCACCTACCCGTGTTCCC
CGGGATATTACGTCAGTTCCGGTGACGTCATAACCAGAACGTGTACGGAA
AATGGGACATGGACTGAGCCGGATGTTTTCTGCCAAGACTGTAGTGACCC
ACTTGGAGTGGAATCTGGTGCCATACCTGATGACAGCATCATTGCATCCT
CGATCTATAGCCCTGAATATGACCCTTATCTTGGGCGGTTAAACCGAGTT
GGAGGCGCCTGGGCAGCCAAATACAACACCATCGGACAGTGGCTGCAGGT
TGATTTAGGGGAAATGAAGCGCGTCATGGGCACCATTATTCAGGGTCAAG
GTCTTGATCATTCCCAGTGGGTGACGTCGTACAAACTCCAGTACAGCACA
GACCGGATTACTTGGACGACATATGCAGGCAGCGATGGCTCACCAGGCCT
GTGTGTTGACCCACCGACCCAAGCCAACACTACCGGGCCCGTGTGCGAAT
TGGCTGATTATCCGGGGGAGAACTGCACCTACCCGTGTTCCCCGGGATAT
TACGTCAGTTCCGGTGACGTCATAACCAGAACGTGTACGGAAAATGGGAC
ATGGACTGAGCCGGATGTTTTCTGCCAAGACTGTAGTGACCCACTTGGAG
TGGAATCTGGTGCCATACCTGATGACAGCATCATTGCATCCTCGATCTAT
AGCCCTGAATATGACCCTTATCTTGGGCGGTTAAACCGAGTTGGAGGCGC
CTGGGCAGCCAAATACAACACCATCGGACAGTGGCTGCAGGTTGATTTAG
GGGAAATGAAGCGCGTCATGGGCACCATTATTCAGGGTCAAGGTCTTGAT
CATTCCCAGTGGGTGACGTCGTACAAACTCCAGTACAGCACAGACCGGAT
TACTTGGACGACATATGCAGGCAGCGATGGCTCACCAGGCCTGTGTGTTG
ACCCACCGACCCAAGCCAACACTACCGGGCCCGTGTGCGAATTGGCTGAT
TATCCGGGGGAGAACTGCACCTACCCGTGTTCCCCGGGATATTACGTCAG
TTCCGGTGACGTCATAACCAGAACGTGTACGGAAAATGGGACATGGACTG
AGCCGGATGTTTTCTGCCAAGACTGTAGTGACCCACTTGGAGTGGAATCT
GGTGCCATACCTGATGACAGCATCATTGCATCCTCGATCTATAGCCCTGA
ATATGACCCTTATCTTGGGCGGTTAAACCGAGTTGGAGGCGCCTGGGCAG
CCAAATACAACACCATCGGACAGTGGCTGCAGGTTGATTTAGGGGAAATG
AAGCGCGTCATGGGCACCATTATTCAGGGTCAAGGTCTTGATCATTCCCA
GTGGGTGACGTCGTACAAACTCCAGTACAGCACAGACCGGATTACTTGGA
CGACATATGCAGGCAGCGATGGCTCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000017 | genome | Sc0000017:735545..741337 - |
Properties
| Property Name | Value |
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| Transcript id | BL96497_cuf0 |
| Biotype | protein_coding |
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