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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96477_cuf0 >transcript:BL96477_cuf0-protein ID=transcript:BL96477_cuf0-protein|Name=transcript:BL96477_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=147bp
CVHADQTVLQFETFDQTLAEVDTCSNGVTVDLTPPSPGQVWVNRRDQDFQ
TSTSELYVYWDSFVDVEEHGMSSHRSGIQKYELAIGSSRSGVDIQKFKDV
GVINMAIMRNLRLQHGHTYYVTIRATDYVGFAVTSVSQGVTIDVTVP Run BLAST on NCBI mRNA from alignment at xpSc0039678:156047..157008+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96477_cuf0 ID=transcript:BL96477_cuf0|Name=transcript:BL96477_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=962bp|location=Sequence derived from alignment at xpSc0039678:156047..157008+ (Branchiostoma lanceolatum)
TCTGTGTCCACGCCGACCAGACCGTCCTGCAGTTTGAGACGTTTGACCAG
ACCCTGGCTGAAGTAGACACCTGTTCTAACGGCGTCACTGTGGACTTGAC
GCCGCCTTCACCTGGACAGGTGTGGGTAAACAGGAGGGACCAGGATTTTC
AGGTAAGCTATTACAAGTCGACCAATGTTTTCAAACGTAACTCTATGTAA
GTCATATGTTAAACTTTAAATCACCAACTTTGCCATGTAAATTTCTGGAC
GGTTGTTAAAACTAATGATTTGTCGTCGTAATGAACTCTGCAGCATATCC
AAAATAAAGCTGTATGCAGCTTGTATTCACAGAAGAATTGACTGATGCAT
CATTAAGACACAGAAAATTATAATTTTGTTCCCTTCAGACTTCGACGTCT
GAACTGTATGTTTACTGGGATTCGTTTGTTGACGTGGAGGAGCATGGGAT
GTCGTCTCACCGCAGCGGCATTCAGAAATACGAACTTGCAATAGGTGAGC
ATTATCTTAAGGCTATAAGATGAAAATCAATCACATAAGTAACATGTATA
CGGAACTATATTTGATCACTTTTATTTATACATCATAGTAACCTTTTTCC
TACAATGTTCTACAGGATCTTCGCGCAGCGGTGTGGACATTCAGAAATTT
AAAGACGTGGGTGTGATAAACATGGCCATCATGCGCAACCTTCGTCTGCA
ACATGGACACACCTATTACGTCACTATCCGCGGTAAATGGAATTTAGAAC
AGCATTTTATGATGAAGATCTGCACGATGGTTTTGTAATTGATAATGTCA
TTTTCAAACGGAAAAAACATCTCTTGCTAGGCTTCTTTTGTCAACAAAAT
ACCTTTTGGTCCAAACATTTTTTCCCGTAATCATTGTCCTCCAGCAACCG
ATTACGTCGGCTTTGCGGTGACGAGTGTATCACAGGGTGTGACCATCGAC
GTCACCGTTCCC Coding sequence (CDS) from alignment at xpSc0039678:156047..157008+ >transcript:BL96477_cuf0 ID=transcript:BL96477_cuf0|Name=transcript:BL96477_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1764bp|location=Sequence derived from alignment at xpSc0039678:156047..157008+ (Branchiostoma lanceolatum)
TGTGTCCACGCCGACCAGACCGTCCTGCAGTTTGAGACGTTTGACCAGAC
CCTGGCTGAAGTAGACACCTGTTCTAACGGCGTCACTGTGGACTTGACGC
CGCCTTCACCTGGACAGGTGTGGGTAAACAGGAGGGACCAGGATTTTCAG
ACTTCGACGTCTGAACTGTATGTTTACTGGGATTCGTTTGTTGACGTGGA
GGAGCATGGGATGTCGTCTCACCGCAGCGGCATTCAGAAATACGAACTTG
CAATAGGATCTTCGCGCAGCGGTGTGGACATTCAGAAATTTAAAGACGTG
GGTGTGATAAACATGGCCATCATGCGCAACCTTCGTCTGCAACATGGACA
CACCTATTACGTCACTATCCGCGCAACCGATTACGTCGGCTTTGCGGTGA
CGAGTGTATCACAGGGTGTGACCATCGACGTCACCGTTCCCTGTGTCCAC
GCCGACCAGACCGTCCTGCAGTTTGAGACGTTTGACCAGACCCTGGCTGA
AGTAGACACCTGTTCTAACGGCGTCACTGTGGACTTGACGCCGCCTTCAC
CTGGACAGGTGTGGGTAAACAGGAGGGACCAGGATTTTCAGACTTCGACG
TCTGAACTGTATGTTTACTGGGATTCGTTTGTTGACGTGGAGGAGCATGG
GATGTCGTCTCACCGCAGCGGCATTCAGAAATACGAACTTGCAATAGGAT
CTTCGCGCAGCGGTGTGGACATTCAGAAATTTAAAGACGTGGGTGTGATA
AACATGGCCATCATGCGCAACCTTCGTCTGCAACATGGACACACCTATTA
CGTCACTATCCGCGCAACCGATTACGTCGGCTTTGCGGTGACGAGTGTAT
CACAGGGTGTGACCATCGACGTCACCGTTCCCTGTGTCCACGCCGACCAG
ACCGTCCTGCAGTTTGAGACGTTTGACCAGACCCTGGCTGAAGTAGACAC
CTGTTCTAACGGCGTCACTGTGGACTTGACGCCGCCTTCACCTGGACAGG
TGTGGGTAAACAGGAGGGACCAGGATTTTCAGACTTCGACGTCTGAACTG
TATGTTTACTGGGATTCGTTTGTTGACGTGGAGGAGCATGGGATGTCGTC
TCACCGCAGCGGCATTCAGAAATACGAACTTGCAATAGGATCTTCGCGCA
GCGGTGTGGACATTCAGAAATTTAAAGACGTGGGTGTGATAAACATGGCC
ATCATGCGCAACCTTCGTCTGCAACATGGACACACCTATTACGTCACTAT
CCGCGCAACCGATTACGTCGGCTTTGCGGTGACGAGTGTATCACAGGGTG
TGACCATCGACGTCACCGTTCCCTGTGTCCACGCCGACCAGACCGTCCTG
CAGTTTGAGACGTTTGACCAGACCCTGGCTGAAGTAGACACCTGTTCTAA
CGGCGTCACTGTGGACTTGACGCCGCCTTCACCTGGACAGGTGTGGGTAA
ACAGGAGGGACCAGGATTTTCAGACTTCGACGTCTGAACTGTATGTTTAC
TGGGATTCGTTTGTTGACGTGGAGGAGCATGGGATGTCGTCTCACCGCAG
CGGCATTCAGAAATACGAACTTGCAATAGGATCTTCGCGCAGCGGTGTGG
ACATTCAGAAATTTAAAGACGTGGGTGTGATAAACATGGCCATCATGCGC
AACCTTCGTCTGCAACATGGACACACCTATTACGTCACTATCCGCGCAAC
CGATTACGTCGGCTTTGCGGTGACGAGTGTATCACAGGGTGTGACCATCG
ACGTCACCGTTCCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039678 | genome | xpSc0039678:156047..157008 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96477_cuf0 |
| Biotype | protein_coding |
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