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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96475_cuf0 >transcript:BL96475_cuf0-protein ID=transcript:BL96475_cuf0-protein|Name=transcript:BL96475_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=177bp
MYLLLTLALLAAVQAVPVKDVPLDMQLAAARASGSDPTGINEDTTCYNHP
QSSRNAISSPFYHGTTPLSLRRSVDEVGTLWPVHRVIIFRETVFEWGVGS
SNFADKVAWEGVREPSDCSVSWSDSAAGSSSCTLQQATDFSRGYKTRYGS
YDLIFNNCHNFVNRMMNYLDSGCTRYP Run BLAST on NCBI mRNA from alignment at Sc0000096:38458..41002+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96475_cuf0 ID=transcript:BL96475_cuf0|Name=transcript:BL96475_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2545bp|location=Sequence derived from alignment at Sc0000096:38458..41002+ (Branchiostoma lanceolatum)
ACGACGTCTGTGTGGTGGTTACAAGATTTTATCTGCCCCCTCTGAAAGTC
CTGCGATAACGTAAGTACCATAAAACAATAAAATTCAACTGTATAAAAGG
CATGTAGTGGGGCGCCAGTTTACCGACTCTGGATTGAATCGGCGTCCAGT
GGTGGAATCTACGGTTTACCAACGAGTTCACGATGTACCTGTTGCTGACC
CTCGCGCTCTTGGCGGCTGTCCAGGCGGTCCCGGTGAAGGATGTCCCGCT
GGACATGCAGCTCGCTGCGGCCCGCGCATCGGGGTCCGACCCGACCGGCA
TCAACGAAGACACCACCTGCTACAACCATCCCCAGTCCAGCCGAAACGGT
ATCGTGTCCAGTGTTGAAGTTTATCATGTCGTGTCTTTCCTTTCTGTCCT
TCATTCTTTTACGCTATGAAAACGTGAAAATATACATAAAAGACTTTTGC
GACATTCTGTAGATAGCCTGAATGTAGCAAAGTGGATAATGATTTAGTGT
GGTCGAGAGGGGATGATAAAATCCGGAGAGAACTTATATCAAGGAATAAT
GAACTTGTATTGTTATATGTGTTACTCATTGCCTATCTACAAACGAAGTT
GTATCCTTACACATTTTAAAAGTAATTGTGCTCGGTTCGGCGTCTTAAAG
TATCTCACTGTACCGCGCCTATTACATTCACAAACTGGCACAAACAGCGA
ATCGGCGCCATTTTATCGCCTGAAATTGCTAGATTTGAAAATTAAAAAAA
AAAGTGGAGATCTTAGTCATCTTCTCATTGTGCATGATGTATTTTGCATG
TGTCGATTTCTAAAATGCCTTTTCCTTTAGCTAGCCTAGCCTGCCACCCA
GAATAGAAGAGATGTTGTGTAAGAGTGTTACGCCGTTACATTTTTTTTCA
GCCATCAGCTCTCCCTTCTACCACGGCACCACCCCGCTGAGTCTGCGGCG
GTCCGTGGATGAGGTTGGCACCTTGTGGCCCGTTCACCGCGTCATTATCT
TCCGCGAGACAGTCTTCGAGTGGGGCGTCGGCTCCAGTAACTTCGCTGAC
AAGGTATAAGATTGTGTTATAGCTTCATCAACTGTGTTGTTACTTTGAAC
AACCCGAAGAAGTGTTATATTTTACCGGGCGTGTTTCTGTGTGTCTGTTA
GTGAACACGATAAGTCGAGAATGCCTGGATGAATTGTCTTTATATTTAGT
ATGTCGGTACGTATGTGTAAAATCTCAAGATGATCAGATTTTGGGGCGAA
CTACTTTAAGTTTAAAAATCTGTTGTATTGCATCATCAGTCTCTGTAAAA
TCTGTTATAGTGAGGGAGATATTCCCATAGTGGTATGGCTCATACCCATG
GGGGCTTACTAGTCTGGTAGTGGTGAAAACACAGCTAAAACGTAACAGCT
CACATGGCTTGCTAGACTGCAGTAGTAACAAGAGTGGTTTAGAAAAAAAC
ACAGGCGACGTGAAGATTAGTAGGAAAGAGATGATTGAGCCTAATTATCA
CCTTCACAATACGATACTTATTAATATGCAAATCAGAATTTAATTGGCAT
GATTAATGAGGAAAGTTTGTACGTCCACTGTATTTCATCATACTCTCAAA
CATGTGACATGTGCCTGGGAAAGAGAAATATTGATAGATACTAATAATGC
AAATGTATACATCATTTGCATAATAAATGAGAAAAACTATAACTCAAGAA
GGGGCTGATGGCTCATGATGATTTTTTATGGAAATAATGAAAAACAGAAT
CTTGATTGCATAATTAATCAGGACTTTCGTAAACCTACTGCAGTCCATGA
TAGGACTATTCGACTATTCTACTTAACCTCGTAACGTTTGTAACTGGGGA
AGAGAGGAATGTTGAAACATAGGAAATATGCACATGAAGATCTTATTTGC
ATAATTAATGAGAAACTACTATAATTCTATACTGGTAAATTACAAATTCA
TAATTACCACTTGGTTATATTATGGGTATGAGCCATGACACTATGGGAAT
ATCTCCTTCACTATACCAGATTTTATAGATACTGATGATGCAATACAACA
GATTTTTAAAATTTCCTCGTTAATTATGCAAAGTAGTTCATCTTGAGGTT
TCCCACATATGATCAAAATGAATAAAGATTGAAAAACGCTGTATATTTCA
TGGAGGTATGAAATCTTCGATTCCTTGTTTAGAGATGGTATTGTAAAGAC
GTGCAGCACTGGTTGACGAGTTATTATTCCCCCCCCCCAGGTTGCCTGGG
AGGGTGTCCGTGAGCCGTCCGACTGCTCGGTGAGCTGGTCCGACAGCGCC
GCCGGTTCCTCCTCCTGTACCCTGCAGCAGGCCACGGACTTCAGCCGCGG
CTACAAGACTCGCTACGGCAGTTATGACCTCATCTTCAACAACTGTCACA
ACTTCGTCAACCGCATGATGAACTACCTCGACTCCGGGTGCACTCGCTAC
CCTTAGATCGTCTTCTGACTTTAGGTGGTTGGATAAAACCACCCTAAATT
CATTTTAAATCCGCCTAAGCCAGGCAAACATGTTTACAATCTAAG Coding sequence (CDS) from alignment at Sc0000096:38458..41002+ >transcript:BL96475_cuf0 ID=transcript:BL96475_cuf0|Name=transcript:BL96475_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1602bp|location=Sequence derived from alignment at Sc0000096:38458..41002+ (Branchiostoma lanceolatum)
ATGTACCTGTTGCTGACCCTCGCGCTCTTGGCGGCTGTCCAGGCGGTCCC
GGTGAAGGATGTCCCGCTGGACATGCAGCTCGCTGCGGCCCGCGCATCGG
GGTCCGACCCGACCGGCATCAACGAAGACACCACCTGCTACAACCATCCC
CAGTCCAGCCGAAACGCCATCAGCTCTCCCTTCTACCACGGCACCACCCC
GCTGAGTCTGCGGCGGTCCGTGGATGAGGTTGGCACCTTGTGGCCCGTTC
ACCGCGTCATTATCTTCCGCGAGACAGTCTTCGAGTGGGGCGTCGGCTCC
AGTAACTTCGCTGACAAGGTTGCCTGGGAGGGTGTCCGTGAGCCGTCCGA
CTGCTCGGTGAGCTGGTCCGACAGCGCCGCCGGTTCCTCCTCCTGTACCC
TGCAGCAGGCCACGGACTTCAGCCGCGGCTACAAGACTCGCTACGGCAGT
TATGACCTCATCTTCAACAACTGTCACAACTTCGTCAACCGCATGATGAA
CTACCTCGACTCCGGGTGCACTCGCTACCCTTAGATGTACCTGTTGCTGA
CCCTCGCGCTCTTGGCGGCTGTCCAGGCGGTCCCGGTGAAGGATGTCCCG
CTGGACATGCAGCTCGCTGCGGCCCGCGCATCGGGGTCCGACCCGACCGG
CATCAACGAAGACACCACCTGCTACAACCATCCCCAGTCCAGCCGAAACG
CCATCAGCTCTCCCTTCTACCACGGCACCACCCCGCTGAGTCTGCGGCGG
TCCGTGGATGAGGTTGGCACCTTGTGGCCCGTTCACCGCGTCATTATCTT
CCGCGAGACAGTCTTCGAGTGGGGCGTCGGCTCCAGTAACTTCGCTGACA
AGGTTGCCTGGGAGGGTGTCCGTGAGCCGTCCGACTGCTCGGTGAGCTGG
TCCGACAGCGCCGCCGGTTCCTCCTCCTGTACCCTGCAGCAGGCCACGGA
CTTCAGCCGCGGCTACAAGACTCGCTACGGCAGTTATGACCTCATCTTCA
ACAACTGTCACAACTTCGTCAACCGCATGATGAACTACCTCGACTCCGGG
TGCACTCGCTACCCTTAGATGTACCTGTTGCTGACCCTCGCGCTCTTGGC
GGCTGTCCAGGCGGTCCCGGTGAAGGATGTCCCGCTGGACATGCAGCTCG
CTGCGGCCCGCGCATCGGGGTCCGACCCGACCGGCATCAACGAAGACACC
ACCTGCTACAACCATCCCCAGTCCAGCCGAAACGCCATCAGCTCTCCCTT
CTACCACGGCACCACCCCGCTGAGTCTGCGGCGGTCCGTGGATGAGGTTG
GCACCTTGTGGCCCGTTCACCGCGTCATTATCTTCCGCGAGACAGTCTTC
GAGTGGGGCGTCGGCTCCAGTAACTTCGCTGACAAGGTTGCCTGGGAGGG
TGTCCGTGAGCCGTCCGACTGCTCGGTGAGCTGGTCCGACAGCGCCGCCG
GTTCCTCCTCCTGTACCCTGCAGCAGGCCACGGACTTCAGCCGCGGCTAC
AAGACTCGCTACGGCAGTTATGACCTCATCTTCAACAACTGTCACAACTT
CGTCAACCGCATGATGAACTACCTCGACTCCGGGTGCACTCGCTACCCTT
AG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000096 | genome | Sc0000096:38458..41002 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96475_cuf0 |
| Biotype | protein_coding |
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