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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96467_cuf17 >transcript:BL96467_cuf17-protein ID=transcript:BL96467_cuf17-protein|Name=transcript:BL96467_cuf17|organism=Branchiostoma lanceolatum|type=polypeptide|length=368bp
VKDNIRNFGGDPERVTIFGESAGAVSVSYQLLSPLSKGLFQRAISQSGTW
TTMPVNPQPLPLTKMFAEEAGCETEDTATMTTCLNGKSPQDLLESFQALQ
LKMGPMYFSPVVDGTFLTSQPMDLMEKGEINTADYLLGVSNHEFGWLMLP
FAIQGDPLVGISQEDFVRLTKTAASMVYRDNPNIDKMVDAMVTEYSAKSD
DPIAIQYQFSHLYGDFLFVAPTIMVADKHAGAGARVLLYENQYRPSIYPN
RPDWVGCDHGDDIFMVMGIPFFDDQGATNITYSKTDEHVSLSLMAYWANF
ARTGDPSVSTGGPTDSPSLPTWPQYTPDNPVYMKLDVVPTTDVGLKSKKM
KLWNEVIPKLAAVKKDEL Run BLAST on NCBI mRNA from alignment at Sc0000045:1790299..1793449- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96467_cuf17 ID=transcript:BL96467_cuf17|Name=transcript:BL96467_cuf17|organism=Branchiostoma lanceolatum|type=mRNA|length=3151bp|location=Sequence derived from alignment at Sc0000045:1790299..1793449- (Branchiostoma lanceolatum)
GTGAAGGACAACATCCGAAACTTCGGTGGAGATCCAGAAAGAGTCACCAT
ATTTGGAGAGTCAGCAGGTGCCGTAAGCGTCTCCTATCAACTCCTGTCAC
CCCTAAGCAAAGGTCTGTTCCAGAGAGCCATCTCACAGAGTGGTACCTGG
ACAACCATGCCGGTCAACCCTCAGCCACTTCCGCTGACGAAAATGTTTGC
CGAAGAGGCCGGGTGCGAGACGGAAGACACGGCAACCATGACGACATGTC
TGAATGGGAAGTCCCCACAGGACCTTTTGGAAAGCTTCCAAGCTTTACAA
CTTAAGATGGGCCCCATGTATTTTTCACCTGTAGTTGATGGGACGTTTCT
GACGTCTCAGCCCATGGATCTGATGGAGAAAGGAGAAATCAACACAGCAG
ATTATCTTCTTGGAGTCAGCAACCACGAGTTCGGATGGTTGATGCTGCCG
TTTGCAATCCAAGGGGACCCTCTTGTAGGGATATCCCAGGAAGATTTTGT
CAGACTAACAAAGACCGCGGCGTCAATGGTTTACCGGGTGAGCACAGACC
ACTTTTGATTTATATTGCAAAATTGCAAACGTTTAAAAACACAAAAAAGG
CTCGAAGTATTGTTGCATAGCAGTTTTCAGTATTATTTCGGAGTAACAGC
CCAAGAAGATTTCCAATATTTTGGAAAACATTTGTTGAACTCATAAGGCG
CCTTTCCTTCTCTATTCTATCTGCTTAGTGAAATCTTTTCTCTGTATCCT
TGCTTCCCTTTCCACGCTTAGGACAATCCAAACATTGACAAAATGGTGGA
CGCCATGGTGACTGAGTACTCAGCCAAGTCTGACGACCCAATTGCGATCC
AGTACCAGTTCTCTCATCTGTATGGGGACTTCCTCTTCGTGGCCCCCACA
ATTATGGTGGCTGATAAACATGCCGGTGAGATTTGAACTGATACTTGATT
GTGCAAGTTATTGAAAGTATCTTGTGTATATGATGAGCACAAAATATGCC
ATTGCATTATATTAATTTGTTATAAACATGTTATCAGATTTTTTTTAGAT
GCTCCAATATAGGGAATGTATTTACTCTGCAGCAAAATATATTTAAGTAC
ACCTTAAATCATGCATAAAGGTTTGCTTCTTTATTTGACAGTGTTATTAA
TTCACGAACGGCAATACCTACCTTACATTACATTACAATGTGTATCTTAC
TGGAAGATTTTCCGTTTACTTTCTACTCGTACATAGACATTACAAATAGT
CCTATATGCGTACCTCATTATGTTGACTGTTGTTCTTAACCCTAATCAAT
AGGCGCCGGTGCTCGTGTCCTCCTCTATGAGAACCAGTACCGACCTTCCA
TCTACCCGAACCGACCCGACTGGGTGGGATGTGACCATGGAGACGACATT
TTCATGGTTATGGGAATACCGTTCTTTGACGACCAAGGGGCGACAAACAT
AACCTACTCTAAGACTGACGAGCATGTCAGCTTGAGCCTGATGGCGTACT
GGGCAAACTTCGCACGAACTGGGTAAGTATTGGCCACCTCATATAAAGAC
AAGCCCACAGCTTAACGTAAATGCTAGACAGCGGCATTTTAACCCGGACA
CAGTTACTTTTCATATCATGATTTTATTTACTTTCTTCACTACCAAATAT
GTTTTCTTGCTTTTCTAGTGTGTTTTTTTAAAACTCGTGAACAAATATTT
CTGAATAATTAAGAAAGAAAAAATAGTCTGATTCTTTCCATGGCAGTAAT
CACATGCACAACAAAGAATACTTACCTTATTCTCTAAAGTTAAACCATTT
CTCGAAAAGATTTTCACCCTCAAGAATTTTTGAAATTCGAGTCTATTTTT
TTTTTAATTTCATAGACTTCAAGGTTATTTTTACGATAATCTNTTAAAAT
TTCATAGACTTCAAGGTTATGTTTAAGGTAATATTAGAATTTTTCTATCC
CCTTTCTTGAAAAATCTTACTTTAAGAAAAATATTGTACGAAAAATAACT
TAAGAAAAAAAATTCTTAACTCGTGGACAAAATGTTTTTTCTTAAGCGTA
GTAAGTTTTCTTAGTAAGTTTTCTTCTGTATAAGAAGAAACAAGAAAAAT
GAGAAAAGCCATTTTCGGTAGCTGTTGGTACTTCAACTTTACACTAAATT
TGTTGCAGCGATCCATCCGTCTCCACTGGCGGACCCACTGACAGCCCCTC
CCTGCCGACCTGGCCTCAGTACACACCTGACAACCCGGTCTATATGAAGC
TGGACGTGGTGCCGACCACTGACGTTGGGCTGAAGTCTAAGAAAATGAAA
CTTTGGAACGAAGTCATCCCCAAACTGGCTGCTGTGAAGAAAGATGAACT
TTGAAAATCCCTCACAGAAAAAAATAATAATTTGTGCTGCTACTCTGTCT
CATCTCAAGTAAAACTCAATGTGTTTTGATTTATCAACGTTTATGTTTGT
TTCGATACATGCATCAAATATTTTCATTCGTATACTATAGATTTTATAGT
GGCAGAATAATATCATATTGATTGTATATGCGTATCGACATTAATTGCAG
TGCGTCTTCATACAAGTGCCAATTTTGAGAGTTTGAGACTTTTTTCATTT
GTGTTAGATTTATGTCTTGATGAAATTAACGTATGACCAATCCTGATACG
ACACTGAGACAATGAACGTGATTGTTTACTTTACACCGAAGTCATAACGC
TCAAGAGTACATTGTTTTCATGATTGACGTATGTCAAGAAAAAGACAACC
GTTACTTATTAATCAACATTCATGGAGTGCATTTGAACCTCAGTAATACT
AAAATGTGAACCTTGAAGATTGGAATGTTTTTTCTAGGATAAATTTGTTT
TAGTTTCTTTTAGTGCAGAATAGTACGAAGTCATTAAAACTTGTAGTTGC
TACTTTGGTCATGAGTGACCACCTTCAAAATGTGTTATTCTGTTCTGTGT
CAGTCATTGGATGCACCCTGATCACTGAGCTGAGACAGGCTCATCGCGTC
ATTCAATGAAACTTAATCCAAAAAGAAGTTGGCCATTCTAGTTTAAATGT
TAAAGTATCATTGTCTGTGTTTAGCAGATTTTGTGTGCAACGATCTTACA
TACTATAGATTTGTCATATTTTGGCTCATAATCAGTTGTGCTCTTTCAGC
C Coding sequence (CDS) from alignment at Sc0000045:1790299..1793449- >transcript:BL96467_cuf17 ID=transcript:BL96467_cuf17|Name=transcript:BL96467_cuf17|organism=Branchiostoma lanceolatum|type=CDS|length=4428bp|location=Sequence derived from alignment at Sc0000045:1790299..1793449- (Branchiostoma lanceolatum)
GTGAAGGACAACATCCGAAACTTCGGTGGAGATCCAGAAAGAGTCACCAT
ATTTGGAGAGTCAGCAGGTGCCGTAAGCGTCTCCTATCAACTCCTGTCAC
CCCTAAGCAAAGGTCTGTTCCAGAGAGCCATCTCACAGAGTGGTACCTGG
ACAACCATGCCGGTCAACCCTCAGCCACTTCCGCTGACGAAAATGTTTGC
CGAAGAGGCCGGGTGCGAGACGGAAGACACGGCAACCATGACGACATGTC
TGAATGGGAAGTCCCCACAGGACCTTTTGGAAAGCTTCCAAGCTTTACAA
CTTAAGATGGGCCCCATGTATTTTTCACCTGTAGTTGATGGGACGTTTCT
GACGTCTCAGCCCATGGATCTGATGGAGAAAGGAGAAATCAACACAGCAG
ATTATCTTCTTGGAGTCAGCAACCACGAGTTCGGATGGTTGATGCTGCCG
TTTGCAATCCAAGGGGACCCTCTTGTAGGGATATCCCAGGAAGATTTTGT
CAGACTAACAAAGACCGCGGCGTCAATGGTTTACCGGGACAATCCAAACA
TTGACAAAATGGTGGACGCCATGGTGACTGAGTACTCAGCCAAGTCTGAC
GACCCAATTGCGATCCAGTACCAGTTCTCTCATCTGTATGGGGACTTCCT
CTTCGTGGCCCCCACAATTATGGTGGCTGATAAACATGCCGGCGCCGGTG
CTCGTGTCCTCCTCTATGAGAACCAGTACCGACCTTCCATCTACCCGAAC
CGACCCGACTGGGTGGGATGTGACCATGGAGACGACATTTTCATGGTTAT
GGGAATACCGTTCTTTGACGACCAAGGGGCGACAAACATAACCTACTCTA
AGACTGACGAGCATGTCAGCTTGAGCCTGATGGCGTACTGGGCAAACTTC
GCACGAACTGGCGATCCATCCGTCTCCACTGGCGGACCCACTGACAGCCC
CTCCCTGCCGACCTGGCCTCAGTACACACCTGACAACCCGGTCTATATGA
AGCTGGACGTGGTGCCGACCACTGACGTTGGGCTGAAGTCTAAGAAAATG
AAACTTTGGAACGAAGTCATCCCCAAACTGGCTGCTGTGAAGAAAGATGA
ACTTTGAGTGAAGGACAACATCCGAAACTTCGGTGGAGATCCAGAAAGAG
TCACCATATTTGGAGAGTCAGCAGGTGCCGTAAGCGTCTCCTATCAACTC
CTGTCACCCCTAAGCAAAGGTCTGTTCCAGAGAGCCATCTCACAGAGTGG
TACCTGGACAACCATGCCGGTCAACCCTCAGCCACTTCCGCTGACGAAAA
TGTTTGCCGAAGAGGCCGGGTGCGAGACGGAAGACACGGCAACCATGACG
ACATGTCTGAATGGGAAGTCCCCACAGGACCTTTTGGAAAGCTTCCAAGC
TTTACAACTTAAGATGGGCCCCATGTATTTTTCACCTGTAGTTGATGGGA
CGTTTCTGACGTCTCAGCCCATGGATCTGATGGAGAAAGGAGAAATCAAC
ACAGCAGATTATCTTCTTGGAGTCAGCAACCACGAGTTCGGATGGTTGAT
GCTGCCGTTTGCAATCCAAGGGGACCCTCTTGTAGGGATATCCCAGGAAG
ATTTTGTCAGACTAACAAAGACCGCGGCGTCAATGGTTTACCGGGACAAT
CCAAACATTGACAAAATGGTGGACGCCATGGTGACTGAGTACTCAGCCAA
GTCTGACGACCCAATTGCGATCCAGTACCAGTTCTCTCATCTGTATGGGG
ACTTCCTCTTCGTGGCCCCCACAATTATGGTGGCTGATAAACATGCCGGC
GCCGGTGCTCGTGTCCTCCTCTATGAGAACCAGTACCGACCTTCCATCTA
CCCGAACCGACCCGACTGGGTGGGATGTGACCATGGAGACGACATTTTCA
TGGTTATGGGAATACCGTTCTTTGACGACCAAGGGGCGACAAACATAACC
TACTCTAAGACTGACGAGCATGTCAGCTTGAGCCTGATGGCGTACTGGGC
AAACTTCGCACGAACTGGCGATCCATCCGTCTCCACTGGCGGACCCACTG
ACAGCCCCTCCCTGCCGACCTGGCCTCAGTACACACCTGACAACCCGGTC
TATATGAAGCTGGACGTGGTGCCGACCACTGACGTTGGGCTGAAGTCTAA
GAAAATGAAACTTTGGAACGAAGTCATCCCCAAACTGGCTGCTGTGAAGA
AAGATGAACTTTGAGTGAAGGACAACATCCGAAACTTCGGTGGAGATCCA
GAAAGAGTCACCATATTTGGAGAGTCAGCAGGTGCCGTAAGCGTCTCCTA
TCAACTCCTGTCACCCCTAAGCAAAGGTCTGTTCCAGAGAGCCATCTCAC
AGAGTGGTACCTGGACAACCATGCCGGTCAACCCTCAGCCACTTCCGCTG
ACGAAAATGTTTGCCGAAGAGGCCGGGTGCGAGACGGAAGACACGGCAAC
CATGACGACATGTCTGAATGGGAAGTCCCCACAGGACCTTTTGGAAAGCT
TCCAAGCTTTACAACTTAAGATGGGCCCCATGTATTTTTCACCTGTAGTT
GATGGGACGTTTCTGACGTCTCAGCCCATGGATCTGATGGAGAAAGGAGA
AATCAACACAGCAGATTATCTTCTTGGAGTCAGCAACCACGAGTTCGGAT
GGTTGATGCTGCCGTTTGCAATCCAAGGGGACCCTCTTGTAGGGATATCC
CAGGAAGATTTTGTCAGACTAACAAAGACCGCGGCGTCAATGGTTTACCG
GGACAATCCAAACATTGACAAAATGGTGGACGCCATGGTGACTGAGTACT
CAGCCAAGTCTGACGACCCAATTGCGATCCAGTACCAGTTCTCTCATCTG
TATGGGGACTTCCTCTTCGTGGCCCCCACAATTATGGTGGCTGATAAACA
TGCCGGCGCCGGTGCTCGTGTCCTCCTCTATGAGAACCAGTACCGACCTT
CCATCTACCCGAACCGACCCGACTGGGTGGGATGTGACCATGGAGACGAC
ATTTTCATGGTTATGGGAATACCGTTCTTTGACGACCAAGGGGCGACAAA
CATAACCTACTCTAAGACTGACGAGCATGTCAGCTTGAGCCTGATGGCGT
ACTGGGCAAACTTCGCACGAACTGGCGATCCATCCGTCTCCACTGGCGGA
CCCACTGACAGCCCCTCCCTGCCGACCTGGCCTCAGTACACACCTGACAA
CCCGGTCTATATGAAGCTGGACGTGGTGCCGACCACTGACGTTGGGCTGA
AGTCTAAGAAAATGAAACTTTGGAACGAAGTCATCCCCAAACTGGCTGCT
GTGAAGAAAGATGAACTTTGAGTGAAGGACAACATCCGAAACTTCGGTGG
AGATCCAGAAAGAGTCACCATATTTGGAGAGTCAGCAGGTGCCGTAAGCG
TCTCCTATCAACTCCTGTCACCCCTAAGCAAAGGTCTGTTCCAGAGAGCC
ATCTCACAGAGTGGTACCTGGACAACCATGCCGGTCAACCCTCAGCCACT
TCCGCTGACGAAAATGTTTGCCGAAGAGGCCGGGTGCGAGACGGAAGACA
CGGCAACCATGACGACATGTCTGAATGGGAAGTCCCCACAGGACCTTTTG
GAAAGCTTCCAAGCTTTACAACTTAAGATGGGCCCCATGTATTTTTCACC
TGTAGTTGATGGGACGTTTCTGACGTCTCAGCCCATGGATCTGATGGAGA
AAGGAGAAATCAACACAGCAGATTATCTTCTTGGAGTCAGCAACCACGAG
TTCGGATGGTTGATGCTGCCGTTTGCAATCCAAGGGGACCCTCTTGTAGG
GATATCCCAGGAAGATTTTGTCAGACTAACAAAGACCGCGGCGTCAATGG
TTTACCGGGACAATCCAAACATTGACAAAATGGTGGACGCCATGGTGACT
GAGTACTCAGCCAAGTCTGACGACCCAATTGCGATCCAGTACCAGTTCTC
TCATCTGTATGGGGACTTCCTCTTCGTGGCCCCCACAATTATGGTGGCTG
ATAAACATGCCGGCGCCGGTGCTCGTGTCCTCCTCTATGAGAACCAGTAC
CGACCTTCCATCTACCCGAACCGACCCGACTGGGTGGGATGTGACCATGG
AGACGACATTTTCATGGTTATGGGAATACCGTTCTTTGACGACCAAGGGG
CGACAAACATAACCTACTCTAAGACTGACGAGCATGTCAGCTTGAGCCTG
ATGGCGTACTGGGCAAACTTCGCACGAACTGGCGATCCATCCGTCTCCAC
TGGCGGACCCACTGACAGCCCCTCCCTGCCGACCTGGCCTCAGTACACAC
CTGACAACCCGGTCTATATGAAGCTGGACGTGGTGCCGACCACTGACGTT
GGGCTGAAGTCTAAGAAAATGAAACTTTGGAACGAAGTCATCCCCAAACT
GGCTGCTGTGAAGAAAGATGAACTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000045 | genome | Sc0000045:1790299..1793449 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96467_cuf17 |
| Biotype | protein_coding |
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