|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96466_cuf7 >transcript:BL96466_cuf7-protein ID=transcript:BL96466_cuf7-protein|Name=transcript:BL96466_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=205bp
MCTTATNMAAVRVLAVIATLFLCYFGATVGQGDGFVVSTATGQVRGTATH
TTDLPDKPIYTFLGIPYAAPPVGELRYRPPQPALPWEGVREAVEYGSYCR
QNLTAFKEMDHDLPILFGEDMTMSEDCLTVNVFTPTVAGDAALPVMMWIH
GGALTIGFGGPPGWEVLAAHQDVVVVSINYRLGVLGFLSTGDENMPGNYG
LLDQV Run BLAST on NCBI mRNA from alignment at Sc0000045:1801563..1806452- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96466_cuf7 ID=transcript:BL96466_cuf7|Name=transcript:BL96466_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=4890bp|location=Sequence derived from alignment at Sc0000045:1801563..1806452- (Branchiostoma lanceolatum)
GTAACCGGTCGCACTTGTGAGCTGACTTCATTGAGTCAATACTTTCTACG
ACCGACAGGACGTTGGTTGTCAAGGAAACAACCCCAAGGTCACGTCGATC
ACCGTGGGCTAGCCTCTGCTGAGTCACACCACCAGTCAGTACATGTGTAC
TACTGCTACGAACATGGCTGCTGTTCGGGTGCTCGCTGTGATCGCCACAC
TGTTTCTCTGCTATTTCGGTAAGTTTGTGGGCTGTATGCGGTAGTGGGGG
GATGCCGGCATCTATGAAATTCAGCACTGTGTAAAAATAGGCAAGCCAGA
CGCGGCAAATATTCATATATGATAACTGTGTNAAATATTCATGTATGATA
ACTGTGTTGTGGTATCAATGGTTGACTGGTTTTAGGCTAGAAATGACATA
CTTGTGGTGTTGTATTTTCTACACCTTTCTGCCATTATAGTTAAGATCGT
GTTATGACATGATCAAGTAATCTATATTCAAGTACTAAATTACTGGGAGG
CCGCCGCGATGCTACTTGTAATGCATGAAAACAGCCCCCTTTGCTGAAAA
CATGATTTTTCTCGCTACGGGTCATCACTGCGAGAATTAGCGTGAGTGTT
ACGTGCATATGTAGTATATTGATAGGCCGGTGCAATTCAGATACTTGCAA
TTCATGAAAAAAGCCCCCCCCCCCTTGCTAAAAACATGGTTATCTAACAT
GGTTATACGCTTAGTATATTTGGAGGCCGGCGCGTTGTAATTCATGAAAA
TAGTCGCCTCCTTCGCTGACAACATGATGATGATTGAAGTCATGATTATA
TTCTCGCTACGGGTCACCGTGGGGTCACTGCAAGAATTAGCAACTTAAGC
AAGATCATACGCCTGACTGTTACGTGAAGTATATTCTGGAGGAGTCGGTG
CGATGCTACTTGCAAATCACAAAAAATAAGCCCCCTTTGCTGAAAACATG
GTTTCCCTCGCTACGAGTCAGTGCAAGCAATTGGGTCAAGTAAGATCGAT
CATGTGTAAGGGTTATTTTGGACAGGGTTACCTCATGAATGGAAGCATTG
TTCGGTGACGTAATACGACCCTCGGCGGCACCCACTAAGATCTCGGCCAG
TCGTACGATAGGTCAACGATAACATGCTGAGAACGTTCTTGGAACAGTCG
TAGATTTTTCTTTACCTGAAACTTTAAGGTTTCTCGCTTAATTAAATCCT
CGTTGGCGGTCGNGGTTTCTTGGTTAATCAAATCCTCGTTTGCGGTCGGT
TTTGCATTGCTTGCAATCTTACGACAAAAGCTTGAAAGGTGACCACGCCT
CTGCCAAATTGTAAAGAGGTTACCCAGGCGACGTTTGCTGTTAATGTTTC
CGTGTCTAACGTTGATTGAGTGCTGCACTTAGACAATAGGTGTATATTTA
CAGAATGTCCCCATAGTATGATAGAAGCTATTAGAATGGAAATGGATGTT
ACCGAAGCAGACATATATAAGTCATACAAAACTACGTTACATTGCGTATC
ACCCCTTTATCACCACTGCTATGCACACGTACAATGTCGTGCGTAAGGTC
AAAGCATTTCAAAGGCCCGCCTACGGACACAACGTTGGATCCTTCAGTGC
TAAATCTCCAAGCAGATGTAAGGATCCAACTCAGCCCCAGTGTTTTAAAT
TATGTCCTATTTTTGGCAACGTTTGGCGGCACAGGTTGCACTAAGTTTTG
CACAGACACATATAAAAAGAACTGAGCTTGAGCCGGCTCTTTACATCTGC
TTGGAGATTGTATGTAGTAGGGCGTGCAAGGTTACCGTGAGCAAAGATCG
CGAGGCGTAATCTCTAAGTAGATGTAGGGTACGGGAGGGTCATAGGTCGA
GCCAATTTTTTCCCCTGCCAAATACGTGGAGGGTGTTTTCAGAAGGGAAA
ATTACGTCACACTCGTGGAGCGCGGTTATTTTCAAGCAGACGTCTGCGTG
CGGAGTTTTGGGGAGGGGTCGTGCCTGGAGGTTTTCCCAAACCTACAATC
CAACCCTAACCTTGACCCCAGCGGTAACCCGTATACCCAAACTCCACGCA
CGGGCACTATCGCACGGAACAAAAATCTGTCGGTGCCGAAATTTTGCGAG
ACGCTGGGTCAGTGTTTTAGAGACTTTTCACCAAGCAGAAGACTACACTG
AGCCTGACCTTATCCATCTGTTTAGTGAAACGGCCATCTACAATATTTGT
GTTTTAATAGCCGTTTCATGGCAGGTTTGTTTTCAAAATCGTACTATGGT
CGTGGCTGATTCTTCAAAAGCTGTAATTGATGGGACAGCTGACGGAGCTT
CCGAGACGTCCACGGCACAAAAACTGGGTTAGACAAACAGGCAAACATCC
TGGGTATACAGACATTTCCCGCGGACAAATTTGGGAAGACACACGAAGTT
GGGAGGCGATGGCATGTAAAAAACCGACAACATGAATAGTAAAAATATTG
AAAATTTAGACTGATGTTTAAACATTTGCCGATTGGGGGGAAAACATAGT
CGTCTGACCTTTCAACAAATTTTTGATCATAAGGGATTTTTCTACACGCA
TGTTCCTAATATATCACAAGATGGTCTTTTTTTTTGTTTGCTACGCATTG
TTTTATTAATGATCAGGACATTTTTGACACGTCACAGTATTTGAGAACAT
TGCATTTAGATTGCATCATACATAATGGAACGGCGCGGACATAATTTTGA
TAGCGTTGCATTCGTCATGAAAATTATACTCTCATATAAAATAAAATCAG
TAAAAAATGACACTATCAAACAATGAAGCGGAAATATATCTTGTGTGTAG
GGTGGCAACTTTGTAAGTAAGTACTACATGTATGTATGTAGAATGGAAGA
CAAAAATGTTTTGAAAATATTCCAGAAAAGTAACTCCTGTAATTATGCAG
CAAATGGCCACCGAATTTATAGAGAATGATGCACAAGAAACATTAAAAAC
TATGACAATCATATTGATATTACACAACGTAAAATGACGTCAGATAGGCC
ATTTTATGGGCTACTGAAACTGGTATGATCATTAAGGTAGTCCTTAAAGA
AACGTAGGGTTTACAATAGAAATCCAGATAAGAGCCTTTCTGATAAAATG
TTAATGTGTGCCAAGAGTTACCCTGTTGTCAAGGGCAACAGAAACGTCAA
ATGTCTTCTAATTCTGCATTGTAGTAGCCGCTGGGATCCGCCATCTTAAG
TCCGCCATCTTGAATTTGTAAAAAATCATTGATTTCAACACTTAGCCCGA
AAACACTACAAAAATTGACTTAGAAATTGTATTTGTTGACAACTGTGTAT
TTTTGCATAAGAGACGCAATGATATTTGGTAAAATTGGTAAATGATAAAT
GATGAAATGGGTATATTACTCATACGTTATTGCCAGACATGTTTTAGGAA
AAAATCATTAAGATCGGCGGCAGTAGATTAAACCGTTGGTGCGGGACTTA
ACTGGTTAGCTGGCGACTGGGAAACCAATTGCAGTTGTTACCTCGGTGAA
AATGGAGGTATTGTTTCGGGACCGTGTTTGTTTGCCTGTCCGTTTGTGTT
TACGTTGGTCAACATATAACCCAAGAAAATATGGCTGGACTATAAGGATA
TTTGGATGACGAAATTTAAGTTGGATCTTGGGAATTCTGACGGCTTCCCT
TGGTACGGCAGCAGAACTTACGGTTTACCATTTTACGAAAGGATCGGGCC
CTCATATGTGTAATTTGCTGGGGAAGGCATTCTATGGGCATACATTTTGT
AACCCTTTTAAATCTTTCCCCACTAGGTGCTACAGTCGGTCAGGGTGACG
GTTTTGTTGTATCTACGGCGACTGGACAAGTCCGTGGAACAGCCACACAC
ACAACCGACCTTCCCGACAAACCGATCTACACTTTCCTGGGCATCCCGTA
CGCAGCGCCACCTGTTGGAGAACTCCGGTACCGCCCGCCCCAGCCTGCCC
TCCCGTGGGAGGGGGTCAGGGAGGCCGTGGAATATGGTTCCTACTGTCGA
CAAAATCTTACTGCCTTCAAAGAGATGGACCATGACCTTCCAATTCTATT
TGGGGAGGACATGACCATGAGCGAGGACTGTCTGACAGTCAACGTCTTCA
CTCCGACGGTAGCAGGGGATGCCGCTTTACCGGTAATTTTTGACATTATT
AATCATCTCGTTACCTCCTTGTCAAAATTCAGGTATATGTTTTACTCTGA
TATGGATTGCGATGGTACAAGTATTTGGTTGGGTGGTAGGTGGTGTGCAG
TTGTGAACTCGACTGTGAGGGTAGTTTCGGCCCTCCTGGTGATTGAACTT
GGAACTGTAGCAGCAAACGTTTAAAGATATTTAGCACTGGACATGCTGTG
GTCTTGACATAAGGCTTTAGTCACTTTTTAGTGGTGTAAACCTTTGGAGT
TATGATGTCTACGAACTCTGGTTTATAAAAGGAATAACATTTCAACTAAG
CTAACATAATGCTAAAGCTACTTCTAGTTGCCTTATTTAGCAGCTCATTT
GTTTAAAATAATGATTACACGGAATGATGTTAGAAAGTTTAAGACCCTTT
AATTATTACTACAGTAATTGCTGGAAAATTAGAAAATAGTAAATATTTAA
TTCTGTATCTCCAGAAAAAGTAAATTGAATTCCAGGAGGAATCTTATCAA
AGTTTGTTCCTAAAAAGTGGATCCTTCCGATTTTCATATGACGAATATTA
TTTCAGGTCATGATGTGGATCCACGGGGGAGCCCTAACGATTGGATTTGG
AGGTCCTCCTGGATGGGAGGTTCTCGCTGCTCACCAAGACGTCGTGGTGG
TCTCCATCAACTACCGTCTCGGTGTGCTGGGTTTCCTCAGCACGGGAGAC
GAGAACATGCCGGGAAACTACGGACTGCTCGACCAGGTCA Coding sequence (CDS) from alignment at Sc0000045:1801563..1806452- >transcript:BL96466_cuf7 ID=transcript:BL96466_cuf7|Name=transcript:BL96466_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=1845bp|location=Sequence derived from alignment at Sc0000045:1801563..1806452- (Branchiostoma lanceolatum)
ATGTGTACTACTGCTACGAACATGGCTGCTGTTCGGGTGCTCGCTGTGAT
CGCCACACTGTTTCTCTGCTATTTCGGTGCTACAGTCGGTCAGGGTGACG
GTTTTGTTGTATCTACGGCGACTGGACAAGTCCGTGGAACAGCCACACAC
ACAACCGACCTTCCCGACAAACCGATCTACACTTTCCTGGGCATCCCGTA
CGCAGCGCCACCTGTTGGAGAACTCCGGTACCGCCCGCCCCAGCCTGCCC
TCCCGTGGGAGGGGGTCAGGGAGGCCGTGGAATATGGTTCCTACTGTCGA
CAAAATCTTACTGCCTTCAAAGAGATGGACCATGACCTTCCAATTCTATT
TGGGGAGGACATGACCATGAGCGAGGACTGTCTGACAGTCAACGTCTTCA
CTCCGACGGTAGCAGGGGATGCCGCTTTACCGGTCATGATGTGGATCCAC
GGGGGAGCCCTAACGATTGGATTTGGAGGTCCTCCTGGATGGGAGGTTCT
CGCTGCTCACCAAGACGTCGTGGTGGTCTCCATCAACTACCGTCTCGGTG
TGCTGGGTTTCCTCAGCACGGGAGACGAGAACATGCCGGGAAACTACGGA
CTGCTCGACCAGGTCATGTGTACTACTGCTACGAACATGGCTGCTGTTCG
GGTGCTCGCTGTGATCGCCACACTGTTTCTCTGCTATTTCGGTGCTACAG
TCGGTCAGGGTGACGGTTTTGTTGTATCTACGGCGACTGGACAAGTCCGT
GGAACAGCCACACACACAACCGACCTTCCCGACAAACCGATCTACACTTT
CCTGGGCATCCCGTACGCAGCGCCACCTGTTGGAGAACTCCGGTACCGCC
CGCCCCAGCCTGCCCTCCCGTGGGAGGGGGTCAGGGAGGCCGTGGAATAT
GGTTCCTACTGTCGACAAAATCTTACTGCCTTCAAAGAGATGGACCATGA
CCTTCCAATTCTATTTGGGGAGGACATGACCATGAGCGAGGACTGTCTGA
CAGTCAACGTCTTCACTCCGACGGTAGCAGGGGATGCCGCTTTACCGGTC
ATGATGTGGATCCACGGGGGAGCCCTAACGATTGGATTTGGAGGTCCTCC
TGGATGGGAGGTTCTCGCTGCTCACCAAGACGTCGTGGTGGTCTCCATCA
ACTACCGTCTCGGTGTGCTGGGTTTCCTCAGCACGGGAGACGAGAACATG
CCGGGAAACTACGGACTGCTCGACCAGGTCATGTGTACTACTGCTACGAA
CATGGCTGCTGTTCGGGTGCTCGCTGTGATCGCCACACTGTTTCTCTGCT
ATTTCGGTGCTACAGTCGGTCAGGGTGACGGTTTTGTTGTATCTACGGCG
ACTGGACAAGTCCGTGGAACAGCCACACACACAACCGACCTTCCCGACAA
ACCGATCTACACTTTCCTGGGCATCCCGTACGCAGCGCCACCTGTTGGAG
AACTCCGGTACCGCCCGCCCCAGCCTGCCCTCCCGTGGGAGGGGGTCAGG
GAGGCCGTGGAATATGGTTCCTACTGTCGACAAAATCTTACTGCCTTCAA
AGAGATGGACCATGACCTTCCAATTCTATTTGGGGAGGACATGACCATGA
GCGAGGACTGTCTGACAGTCAACGTCTTCACTCCGACGGTAGCAGGGGAT
GCCGCTTTACCGGTCATGATGTGGATCCACGGGGGAGCCCTAACGATTGG
ATTTGGAGGTCCTCCTGGATGGGAGGTTCTCGCTGCTCACCAAGACGTCG
TGGTGGTCTCCATCAACTACCGTCTCGGTGTGCTGGGTTTCCTCAGCACG
GGAGACGAGAACATGCCGGGAAACTACGGACTGCTCGACCAGGTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000045 | genome | Sc0000045:1801563..1806452 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96466_cuf7 |
| Biotype | protein_coding |
|
