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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96464_cuf2 >transcript:BL96464_cuf2-protein ID=transcript:BL96464_cuf2-protein|Name=transcript:BL96464_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=164bp
DPPAHGAVQGGHLYGDAATFSCDAGFQLSGTSTLTCQAAQTWSDTSPACN
RKACPAASAPTNGQVSGGRLYGDTVTFSCDPGYELQGSATAVCQADQTWS
QAQPSCQLVTCPVLQPPTNGQMTGGNSYGDKVTFTCNSGYELSGSRERTC
QANEQWSGSPAVCG Run BLAST on NCBI mRNA from alignment at Sc0000876:11325..12284- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96464_cuf2 ID=transcript:BL96464_cuf2|Name=transcript:BL96464_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=960bp|location=Sequence derived from alignment at Sc0000876:11325..12284- (Branchiostoma lanceolatum)
TGGACCCTCCAGCTCACGGCGCGGTGCAGGGAGGTCACCTGTACGGTGAC
GCGGCCACGTTCAGCTGTGACGCCGGGTTCCAGCTGAGCGGGACGTCCAC
TCTGACGTGTCAGGCCGCCCAGACGTGGAGCGATACATCTCCGGCATGCA
ACAGTCAGTCTTCTGTTGCATTAGAGACATGCTAATTATTGATGAAGACT
AGATCTCATGTCACAACGTTAACATTGCATAATAGGAAGAAACACTGTGT
CACATGTAGTACCAAATATCTGTTGTCAGGTTCAAGAAGTCTCCTGTTGA
TCTATGGTATGATTCATATCACTCGTATTCCCATAGGAAAGGCCTGTCCG
GCTGCCTCCGCTCCGACCAACGGCCAAGTGTCCGGCGGGCGTCTCTACGG
CGACACGGTCACGTTCTCCTGCGACCCTGGGTACGAGCTGCAGGGTTCTG
CCACCGCTGTGTGTCAGGCTGACCAGACATGGAGTCAGGCTCAACCGTCA
TGCCAATGTGAGTGTAAAAACATGAGGATTCTGATATATCTTCTTCGTCG
ATCTATTGTACAGTATACTACAAGGGATGCTAAAAAAGACGATGTAGCAC
TCGTTTTTGCAACATCGGCTTTCTCCCGTCTTGGAAGACATTTATACCTA
TAAGTCAGCAAAATGGTTGTGTCCTTGTAGCTCGGAAGTTTATTCTAATC
GTATTGTTTTTTTATCACTATGTCTGATGATCTGATGAAATTGTTACAAA
TGTTAAATCATGATGAACTCCTTTTCCTCCAATGTTTAGTGGTGACGTGT
CCGGTCCTCCAGCCGCCGACAAACGGACAGATGACCGGAGGGAACTCGTA
CGGGGACAAGGTCACCTTCACCTGTAACTCTGGGTACGAGCTGAGCGGCA
GCCGTGAGCGGACGTGCCAGGCTAACGAACAGTGGAGCGGGTCTCCAGCA
GTCTGTGGAA Coding sequence (CDS) from alignment at Sc0000876:11325..12284- >transcript:BL96464_cuf2 ID=transcript:BL96464_cuf2|Name=transcript:BL96464_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1476bp|location=Sequence derived from alignment at Sc0000876:11325..12284- (Branchiostoma lanceolatum)
GACCCTCCAGCTCACGGCGCGGTGCAGGGAGGTCACCTGTACGGTGACGC
GGCCACGTTCAGCTGTGACGCCGGGTTCCAGCTGAGCGGGACGTCCACTC
TGACGTGTCAGGCCGCCCAGACGTGGAGCGATACATCTCCGGCATGCAAC
AGAAAGGCCTGTCCGGCTGCCTCCGCTCCGACCAACGGCCAAGTGTCCGG
CGGGCGTCTCTACGGCGACACGGTCACGTTCTCCTGCGACCCTGGGTACG
AGCTGCAGGGTTCTGCCACCGCTGTGTGTCAGGCTGACCAGACATGGAGT
CAGGCTCAACCGTCATGCCAATTGGTGACGTGTCCGGTCCTCCAGCCGCC
GACAAACGGACAGATGACCGGAGGGAACTCGTACGGGGACAAGGTCACCT
TCACCTGTAACTCTGGGTACGAGCTGAGCGGCAGCCGTGAGCGGACGTGC
CAGGCTAACGAACAGTGGAGCGGGTCTCCAGCAGTCTGTGGAGACCCTCC
AGCTCACGGCGCGGTGCAGGGAGGTCACCTGTACGGTGACGCGGCCACGT
TCAGCTGTGACGCCGGGTTCCAGCTGAGCGGGACGTCCACTCTGACGTGT
CAGGCCGCCCAGACGTGGAGCGATACATCTCCGGCATGCAACAGAAAGGC
CTGTCCGGCTGCCTCCGCTCCGACCAACGGCCAAGTGTCCGGCGGGCGTC
TCTACGGCGACACGGTCACGTTCTCCTGCGACCCTGGGTACGAGCTGCAG
GGTTCTGCCACCGCTGTGTGTCAGGCTGACCAGACATGGAGTCAGGCTCA
ACCGTCATGCCAATTGGTGACGTGTCCGGTCCTCCAGCCGCCGACAAACG
GACAGATGACCGGAGGGAACTCGTACGGGGACAAGGTCACCTTCACCTGT
AACTCTGGGTACGAGCTGAGCGGCAGCCGTGAGCGGACGTGCCAGGCTAA
CGAACAGTGGAGCGGGTCTCCAGCAGTCTGTGGAGACCCTCCAGCTCACG
GCGCGGTGCAGGGAGGTCACCTGTACGGTGACGCGGCCACGTTCAGCTGT
GACGCCGGGTTCCAGCTGAGCGGGACGTCCACTCTGACGTGTCAGGCCGC
CCAGACGTGGAGCGATACATCTCCGGCATGCAACAGAAAGGCCTGTCCGG
CTGCCTCCGCTCCGACCAACGGCCAAGTGTCCGGCGGGCGTCTCTACGGC
GACACGGTCACGTTCTCCTGCGACCCTGGGTACGAGCTGCAGGGTTCTGC
CACCGCTGTGTGTCAGGCTGACCAGACATGGAGTCAGGCTCAACCGTCAT
GCCAATTGGTGACGTGTCCGGTCCTCCAGCCGCCGACAAACGGACAGATG
ACCGGAGGGAACTCGTACGGGGACAAGGTCACCTTCACCTGTAACTCTGG
GTACGAGCTGAGCGGCAGCCGTGAGCGGACGTGCCAGGCTAACGAACAGT
GGAGCGGGTCTCCAGCAGTCTGTGGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000876 | genome | Sc0000876:11325..12284 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96464_cuf2 |
| Biotype | protein_coding |
|
