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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96366_cuf0 >transcript:BL96366_cuf0-protein ID=transcript:BL96366_cuf0-protein|Name=transcript:BL96366_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=131bp
VLVSTVNLGASAACTNGGTYTTSSSATITTDNYPSFYPKSSCTWSLEVPS
GSFILLKFSSFYIEEFGNCAFENVIIYDGNTNGTKLGQFCGTILPPALLS
TSNTMTVVLSTFGFSNTEYTGFSASFTEKGS Run BLAST on NCBI mRNA from alignment at Sc0000049:577488..578873+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96366_cuf0 ID=transcript:BL96366_cuf0|Name=transcript:BL96366_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1386bp|location=Sequence derived from alignment at Sc0000049:577488..578873+ (Branchiostoma lanceolatum)
AGTNTTGGTGAGCACTGTTAACCTCGGCGCATCGGCAGGTAAGTTTTAGA
CTTTATTCTGATCTTTATATTATTTACTTATGGATATTTTGGCTTGCGGT
AGCATCGCGTTATTAAATCTTTCGTAATCATGAAATTTAGAAACAAAACT
CCGTGAATCCAATAGCATGGAAGACATAAGATGTTTTGGACAGTAAAAAG
TACAAAGTTGTGCTTCAGATATTGTTAGGAGTAAAGTTTTCTGCCATGTC
GGCTTCAACAAAGAATCTTATACGTAAAGACATGTAAAGACAGCTTCAAC
AGATCTAGACCCACTGTGTCATAGCTTATAACAGTCTTTCCTGAAACTTC
ACGGTGTTTGTAGAAGTACATATTTGTCTTGATATGTTAATTTTTTTCAG
TGATTAATTGCGTATTTCATCCTGACGAATATTTTCTACATATTGAATAT
TGCATATTGTAACTTGAACGTCCCCTCGCCAATTCTCTCTGCCGTCGCCA
TTTGATCGATTTGGAACAGCCAAAATGACCACAACTTCTCATTCTATATC
ACTGCAGCATGCACTAACGGAGGGACCTATACCACATCGTCCAGTGCCAC
TATCACAACTGACAACTACCCGTCCTTCTACCCAAAAAGTAGCTGCACTT
GGAGTTTGGAGGTCCCCTCTGGCTCATTTATCCTGTTAAAATTCAGTTCA
TTTTATATTGAGGAATTCGGAAACTGTGCCTTTGAAAATGTAATCATATA
TGACGGCAACACTAACGGAACAAAACTCGGTAAGTTGATCTCATACATCA
AAGCTATCACTGAGCTACTGTATTTAACGTTACCCCAAGGTTTAACCCTA
AAACTTTGATACAAAAATTTGGATAATGGTTGCTGAAATCATAGTTAAAA
GCGTACGTATATCGGGTCTATTGTTTGTCATTTGAGTGAATTCGAAATAG
AATGTGTTCAAAACATTAACGTTACTGTACTTAGATGAATGATGTGCTCA
ATGGACCCAGGAGAAGATAGGATTTTCCTCTAAAAGTAAATACTTATTAT
TTTTAACTTACTGGTACCTTCGTTACTCGCTTTGCATATCTAGACAAATA
AATTTATAGCAAATATGCATGTAGCAACGTCGATCTGCCTCAATATCTTC
AATTTACAAAAGAAATTAAAGTAGAAATTTACTGCTCTTCTTAATTTAAG
TTTGCTTTCAAATATCGTCCCCAACCATTTCACCCCTTTATGTATGATCC
AGGACAGTTTTGTGGAACCATCTTACCGCCTGCCTTGCTGTCTACAAGTA
ACACCATGACAGTAGTTCTGTCGACGTTTGGATTCAGTAACACAGAGTAT
ACTGGCTTCTCAGCTTCATTCACAGAGAAGGGCTCA Coding sequence (CDS) from alignment at Sc0000049:577488..578873+ >transcript:BL96366_cuf0 ID=transcript:BL96366_cuf0|Name=transcript:BL96366_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1179bp|location=Sequence derived from alignment at Sc0000049:577488..578873+ (Branchiostoma lanceolatum)
GTNTTGGTGAGCACTGTTAACCTCGGCGCATCGGCAGCATGCACTAACGG
AGGGACCTATACCACATCGTCCAGTGCCACTATCACAACTGACAACTACC
CGTCCTTCTACCCAAAAAGTAGCTGCACTTGGAGTTTGGAGGTCCCCTCT
GGCTCATTTATCCTGTTAAAATTCAGTTCATTTTATATTGAGGAATTCGG
AAACTGTGCCTTTGAAAATGTAATCATATATGACGGCAACACTAACGGAA
CAAAACTCGGACAGTTTTGTGGAACCATCTTACCGCCTGCCTTGCTGTCT
ACAAGTAACACCATGACAGTAGTTCTGTCGACGTTTGGATTCAGTAACAC
AGAGTATACTGGCTTCTCAGCTTCATTCACAGAGAAGGGCTCAGTNTTGG
TGAGCACTGTTAACCTCGGCGCATCGGCAGCATGCACTAACGGAGGGACC
TATACCACATCGTCCAGTGCCACTATCACAACTGACAACTACCCGTCCTT
CTACCCAAAAAGTAGCTGCACTTGGAGTTTGGAGGTCCCCTCTGGCTCAT
TTATCCTGTTAAAATTCAGTTCATTTTATATTGAGGAATTCGGAAACTGT
GCCTTTGAAAATGTAATCATATATGACGGCAACACTAACGGAACAAAACT
CGGACAGTTTTGTGGAACCATCTTACCGCCTGCCTTGCTGTCTACAAGTA
ACACCATGACAGTAGTTCTGTCGACGTTTGGATTCAGTAACACAGAGTAT
ACTGGCTTCTCAGCTTCATTCACAGAGAAGGGCTCAGTNTTGGTGAGCAC
TGTTAACCTCGGCGCATCGGCAGCATGCACTAACGGAGGGACCTATACCA
CATCGTCCAGTGCCACTATCACAACTGACAACTACCCGTCCTTCTACCCA
AAAAGTAGCTGCACTTGGAGTTTGGAGGTCCCCTCTGGCTCATTTATCCT
GTTAAAATTCAGTTCATTTTATATTGAGGAATTCGGAAACTGTGCCTTTG
AAAATGTAATCATATATGACGGCAACACTAACGGAACAAAACTCGGACAG
TTTTGTGGAACCATCTTACCGCCTGCCTTGCTGTCTACAAGTAACACCAT
GACAGTAGTTCTGTCGACGTTTGGATTCAGTAACACAGAGTATACTGGCT
TCTCAGCTTCATTCACAGAGAAGGGCTCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:577488..578873 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96366_cuf0 |
| Biotype | protein_coding |
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