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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96361_cuf8 >transcript:BL96361_cuf8-protein ID=transcript:BL96361_cuf8-protein|Name=transcript:BL96361_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=151bp
MTMALEFLPIPLTWVLLALVAVLFYRYAVHPLWTFKRMGVPGPTPLPLIG
NLWTWLKDGIWNAEASIKRVQQYGKVYGFFFGRTPTLIISDREMLREVLV
KKFYALTNRQTESLSLDTKPSGRMLLNLRGEEWKDVRSTLSPAFSGGKLR
M Run BLAST on NCBI mRNA from alignment at Sc0000092:1007328..1011324- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96361_cuf8 ID=transcript:BL96361_cuf8|Name=transcript:BL96361_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=3997bp|location=Sequence derived from alignment at Sc0000092:1007328..1011324- (Branchiostoma lanceolatum)
CTCTTGGGAGTCCGTCAGCACAAAAAGTTAGACAACGACAAAACAACAAG
TTTCACTGCGATTGTATTGGAAGGGAAACTGACTGCCTAAAGTGACCACC
TGTTGATGACCATGGCTCTAGAGTTTCTCCCCATCCCCCTGACGTGGGTC
CTGCTGGCGCTGGTAGCAGTTCTCTTTTACAGGTAATGTATAATACATTT
CCAACAGGGATACGTCATAGTTACTGACGTCTCCAAACTCTAAAGTTTGC
ATTACAAACTATTTCATATAGCGACTCCAAAGAATGTAAATGTAGCTTCC
GAATAGGACAGTTGTCACCCCCACGAAAAATGGAGGTTGTTTCTGGTGTG
TCTGTGAGTGTGTTAAATGTGTTTGCTAATTTTCAAGCAAAAAAAAATAT
TTTAAAATTTGTGGTCAGCATAACGACTATATTGTGTAAGTACCTGTGGA
TGGATTGAAATGATAATGTTATACGGTATGTGGGTACATGTTAGGTTTTG
AGAAGATTAAGGTCAGTGCCGATTATAGGCCCCCTGGTGTGTGATCTTGG
TACTGCAACTTAGAATTTCCGTTCGTTTGTTTGTTTCCCGTGCTCTAGAC
ATGAGTTTGGGCCCCCTCTCAGCTTGTTTTGGAACTGCCGAACTTGTCTT
AGATATTCCAAAGAGGAACAACGGCTTTTCTAACTTTGGGCATGTGTGCT
AGTTTACTCTGGTAGCTTACATAAAGATGTTCACAGTAAAATGCGAATTA
ATAAAATTATAACTTAATTTGCATAATTCATAAGAAAATTCTATAATTCC
AGTGTTTTCCATTATTAGGATGTCACATCTGTAATCTATGGCAGGTGGAA
CATTAACAGATAACATTACCATTTATGCAAATACAATCTGCATGATAAGT
GTTAGTTAAAAAGTTAGTTACTAGTAAAATCCTCCCACACCATAAGGGGT
ATAGGGCGGTGTCCATCCCCGTTTCATATATAGCCCTGGGCCACACTGTG
GTGCAATCACTGCAGCAGGGGGCTAGTCCACTGGCAGTGGAGTGTGTTTA
ACTTCCATACTGTTTCTGAAGTATGTACCATTTTTATAAAGTCTTTGGTA
TGACTCAATGCTCCTCTTGTCCAGAGGTGTCCTACCCGGAAGTTGAACTC
TGGCCTTCTGGTTCCAAGTAATACGAACTAGATGTGGTAGTGACAGAACT
GCAGACCACTACACCACAGGGACACCCAACAATAAGTGTTCAAGTGTAAT
ATAGTTCATCCAATTAGTAAATGTAATTTCATAGCAACTTTACATTAAAA
TTGTTTACCCTTTTTCTTAGGTATGCAGTGCATCCCTTGTGGACCTTTAA
GAGGATGGGTGTCCCTGGACCCACCCCTCTGCCCTTAATTGGGAACCTGT
GGACATGGTTGAAGGACGTAAGTAGGGATTCTTTTTCTTAAAACAGTTTC
TGCTTTCTATAGTCATTCAGTATGTTCAAAAATGAAACAAAACCAGAATT
TCACTAATTGGTGAAAGCACTAACTGGCTATTAGCTAGCAGGGCATAAGG
GCGTCTTCTGGATGCCCTACATAGAAAAGAAATGAAACGCCCTCCTTCTG
AAGGGGACACCCAGAAGACACCCTGTTTCCCTGGTAAGAATACATACAAG
GCTGTGTTCCCCATATGCACACTGCCACTGTTGTTTTTTTAATAATTGAT
TGACATGCTACCAGGTGATTGTTAATCTATAGAGCCCTTTTGGAAGTTTG
AAATGACGAAGACAGTACGTAACAAGCTGAGACCACAGATTAGTAGATAG
ATGCTGGGTTTCTGGAAAACCTGGGTTAGGCTAGTCAGGAAGGGCTACCT
CAGCAGGATACCCTTTCTGGGCCTTTCCCTAACTTGTATATCATTTAAAC
AGTTTTTGTCTAGTCCTGCGGTGCTAATGATTAACATGTCAAAACATGTT
TGTTTATGTCATAGGGGCCTTCAACTTTGACATATTACCCACAGTGCATC
ACACTGCACATGGGCAGTTCAAACTTTGAACTGGCTTATTGTCGTTTACA
GGGAATCTGGAATGCAGAAGCATCAATCAAGCGTGTGCAACAGTACGGTA
AAGTGTATGGGTAAGTCCAGAATACGTTTTCCGGGATTTTGGCTGTGGAT
TTGAGTGGACAGGATAACACGAGATTTTTAAAGGATTTTCATAAACAGCT
ATGAAAAACTAACATGGCAACATGTTTGTTACCTCTGGGAAGGAGGATCA
CCTCCTGAAGGGGTATTGTGTTTAGTTTTGTCCGTACGTTCGCAGCTATA
ACTTTGCTGCATTGGTATTTAATTTGTCATCTGCTAAATTGCTTGAGATG
ATGCACATTGTTTTTTACACCATAGCTGTTTTTATAGGTATTATGTATTA
TGTCAGAAAACTCCCCTATCTTCATGGAATTGTGGAACAGGCCATTAATG
TCATTGTCTTTTGTAGTCTGATAGATCTGTGTTAATTGGGTTTTATTCCA
AGCAGATGTTGGGTTATGTGTTGTTTTAACATCCTTATTTGTCAAGTTCT
TATTGTTTTTACTTCTATGGCTAGGTTTTTCTTTGGACGGACTCCGACGC
TCATCATATCCGACCGAGAGATGCTCAGAGAGGTCTTAGTGAAGAAGTTT
TACGCCCTCACCAACCGCCAGGTACGCGTTTTTTTCTGACTGGAAAGTTC
AAGTGCAACAATGGAAATGTTCATTTAATGAACTTTATTAGAAGCCTTGC
TGTTGTTACCTCCATGAAAAATGGAGGTATAGTTTTGGGGGGGACTGCAT
GTGTTTGTTTCCGAAATATATTTGAAAGTCAGCATAACTTAAGAACCTCT
GAATGGATTTTTATGATATTTGGTATGTTTGTAGGTCTTGGGAAAATGAA
AGCCAGGGTCAATTTTGGCCCTTCTGGGGTATGACCTTGGTGCTGCAGCA
GAAACAATTTTTATAATCTTTTGTTCTGGACGTGCTATGTGGTCATGATT
TTTTTGGGGGCAGATATTTTTTGATGTCAGGAAGAAGTGGTGTTAGTTTG
GGTCCCCTAGCAGCTTGCTCTGGAACTGCAGGGGCAGTTTTTTAAAAATA
TTTCATGGAGGATAACTGAGCAAACAATGGCGGATTTCTATGTATATGTA
TAGCTCAGACTTAATCCCTTTGATCACAGAGTCAGCCTTAGCTCAGACAT
GTAAGGGATTGCATTCGTCATTATCTCCATGAAAAATGGAGATATACCGT
ATTTTTGGGTGTGTCTGTCTGTCTGTGTGTGTGTCTGATTGTGTTTCACT
ACTGTAGTCAGCATATTACTAACCTCTTGATGGATTACAATGATATTTGG
TATGTGGGCGGGTGTTGTGAAGCCGAAATTCAAGATCGATTTTGGGCCCC
CTGGTATGTGACCTTGGTACTGCAGCAGAACTTCCGTTTTTGTATCTTTT
GACTTGGATGTGCTATGGTCTTGATTTTTGAGTGGCAGATAGCTTGTAAT
GTATTAAAGAAGTGGTGTAGGCTTGGGCTTCCTAGCAGCTTGCACTGGAA
CTGCAGGGGCGTTATTGTGAACATCTTCTAAAGAGAATAACTGAACAAAG
GAACAATGGATGTCCATGATATTTAGTATGCAGGTACAGTAGCATATTTT
GGACAGTGATGTAATGCTGTTGGCCCTGTTTATGAGGCATAAGCCTCAAA
AGAACCCAGCACACTTATCGAGAAGAGTAGGGGTGGCCCGGTGTGCTTCA
GGCTAAACAACACAAGCTGTAGCGACTGGACAACTACTACTAGTAGCTAC
TTGAAAAAAAATCACATATCACCTCAATTCAGGATGACTGCTTTACCTTA
AATTTGCCTTTCTCCAAACCAGACAGAATCACTGAGTTTGGATACAAAAC
CCAGTGGCCGCATGCTGCTCAATCTAAGGGGCGAGGAGTGGAAGGACGTA
CGTAGCACCTTAAGTCCAGCCTTCAGTGGGGGCAAACTGAGGATGGT Coding sequence (CDS) from alignment at Sc0000092:1007328..1011324- >transcript:BL96361_cuf8 ID=transcript:BL96361_cuf8|Name=transcript:BL96361_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=2265bp|location=Sequence derived from alignment at Sc0000092:1007328..1011324- (Branchiostoma lanceolatum)
ATGACCATGGCTCTAGAGTTTCTCCCCATCCCCCTGACGTGGGTCCTGCT
GGCGCTGGTAGCAGTTCTCTTTTACAGGTATGCAGTGCATCCCTTGTGGA
CCTTTAAGAGGATGGGTGTCCCTGGACCCACCCCTCTGCCCTTAATTGGG
AACCTGTGGACATGGTTGAAGGACGGAATCTGGAATGCAGAAGCATCAAT
CAAGCGTGTGCAACAGTACGGTAAAGTGTATGGGTTTTTCTTTGGACGGA
CTCCGACGCTCATCATATCCGACCGAGAGATGCTCAGAGAGGTCTTAGTG
AAGAAGTTTTACGCCCTCACCAACCGCCAGACAGAATCACTGAGTTTGGA
TACAAAACCCAGTGGCCGCATGCTGCTCAATCTAAGGGGCGAGGAGTGGA
AGGACGTACGTAGCACCTTAAGTCCAGCCTTCAGTGGGGGCAAACTGAGG
ATGATGACCATGGCTCTAGAGTTTCTCCCCATCCCCCTGACGTGGGTCCT
GCTGGCGCTGGTAGCAGTTCTCTTTTACAGGTATGCAGTGCATCCCTTGT
GGACCTTTAAGAGGATGGGTGTCCCTGGACCCACCCCTCTGCCCTTAATT
GGGAACCTGTGGACATGGTTGAAGGACGGAATCTGGAATGCAGAAGCATC
AATCAAGCGTGTGCAACAGTACGGTAAAGTGTATGGGTTTTTCTTTGGAC
GGACTCCGACGCTCATCATATCCGACCGAGAGATGCTCAGAGAGGTCTTA
GTGAAGAAGTTTTACGCCCTCACCAACCGCCAGACAGAATCACTGAGTTT
GGATACAAAACCCAGTGGCCGCATGCTGCTCAATCTAAGGGGCGAGGAGT
GGAAGGACGTACGTAGCACCTTAAGTCCAGCCTTCAGTGGGGGCAAACTG
AGGATGATGACCATGGCTCTAGAGTTTCTCCCCATCCCCCTGACGTGGGT
CCTGCTGGCGCTGGTAGCAGTTCTCTTTTACAGGTATGCAGTGCATCCCT
TGTGGACCTTTAAGAGGATGGGTGTCCCTGGACCCACCCCTCTGCCCTTA
ATTGGGAACCTGTGGACATGGTTGAAGGACGGAATCTGGAATGCAGAAGC
ATCAATCAAGCGTGTGCAACAGTACGGTAAAGTGTATGGGTTTTTCTTTG
GACGGACTCCGACGCTCATCATATCCGACCGAGAGATGCTCAGAGAGGTC
TTAGTGAAGAAGTTTTACGCCCTCACCAACCGCCAGACAGAATCACTGAG
TTTGGATACAAAACCCAGTGGCCGCATGCTGCTCAATCTAAGGGGCGAGG
AGTGGAAGGACGTACGTAGCACCTTAAGTCCAGCCTTCAGTGGGGGCAAA
CTGAGGATGATGACCATGGCTCTAGAGTTTCTCCCCATCCCCCTGACGTG
GGTCCTGCTGGCGCTGGTAGCAGTTCTCTTTTACAGGTATGCAGTGCATC
CCTTGTGGACCTTTAAGAGGATGGGTGTCCCTGGACCCACCCCTCTGCCC
TTAATTGGGAACCTGTGGACATGGTTGAAGGACGGAATCTGGAATGCAGA
AGCATCAATCAAGCGTGTGCAACAGTACGGTAAAGTGTATGGGTTTTTCT
TTGGACGGACTCCGACGCTCATCATATCCGACCGAGAGATGCTCAGAGAG
GTCTTAGTGAAGAAGTTTTACGCCCTCACCAACCGCCAGACAGAATCACT
GAGTTTGGATACAAAACCCAGTGGCCGCATGCTGCTCAATCTAAGGGGCG
AGGAGTGGAAGGACGTACGTAGCACCTTAAGTCCAGCCTTCAGTGGGGGC
AAACTGAGGATGATGACCATGGCTCTAGAGTTTCTCCCCATCCCCCTGAC
GTGGGTCCTGCTGGCGCTGGTAGCAGTTCTCTTTTACAGGTATGCAGTGC
ATCCCTTGTGGACCTTTAAGAGGATGGGTGTCCCTGGACCCACCCCTCTG
CCCTTAATTGGGAACCTGTGGACATGGTTGAAGGACGGAATCTGGAATGC
AGAAGCATCAATCAAGCGTGTGCAACAGTACGGTAAAGTGTATGGGTTTT
TCTTTGGACGGACTCCGACGCTCATCATATCCGACCGAGAGATGCTCAGA
GAGGTCTTAGTGAAGAAGTTTTACGCCCTCACCAACCGCCAGACAGAATC
ACTGAGTTTGGATACAAAACCCAGTGGCCGCATGCTGCTCAATCTAAGGG
GCGAGGAGTGGAAGGACGTACGTAGCACCTTAAGTCCAGCCTTCAGTGGG
GGCAAACTGAGGATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000092 | genome | Sc0000092:1007328..1011324 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96361_cuf8 |
| Biotype | protein_coding |
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