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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96346_cuf8 >transcript:BL96346_cuf8-protein ID=transcript:BL96346_cuf8-protein|Name=transcript:BL96346_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=291bp
KSEVETTPKSEAETTAKSEAETTPKSELETTTKSEFKTTPMPEVETTPRS
EAETTPKSEAETTSKSEAETTSKSEVETTPKSEVETTPETIITKTTVVQT
VAVTTQEVPITVPEYTQEPYYTKKPTMATEQPEHPEPTETPKSTGKPEYT
EQPERTGHPETTEEPWSTGKPEYTEHPEPTEHPEPTDKPKSTGKPEYTEQ
PEPTEHPEPTEEPWSTGKPEYTEQPEPTEHLETTEKPSYTGKPEYTGKPE
PTEAVATTEGTKLVTVTTVTTTTETVEERTSKAPEVEPEAT Run BLAST on NCBI mRNA from alignment at Sc0000411:119751..121187+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96346_cuf8 ID=transcript:BL96346_cuf8|Name=transcript:BL96346_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=1437bp|location=Sequence derived from alignment at Sc0000411:119751..121187+ (Branchiostoma lanceolatum)
TAAAGTCGGAGGTTGAGACCACACCAAAGTCAGAGGCTGAGACCACAGCA
AAGTCTGAGGCTGAGACCACACCAAAGTCTGAGCTTGAGACCACAACTAA
GTCTGAGTTTAAGACCACACCAATGCCTGAGGTTGAGACAACACCAAGGT
CTGAGGCTGAGACCACACCAAAGTCTGAGGCTGAGACCACATCAAAGTCT
GAGGCTGAGACCACATCAAAGTCAGAGGTTGAGACCACACCCAAGTCTGA
GGTGGAGACCACACCAGAGACAATTATCACCAAGACTACTGTGGTGCAGA
CTGTTGCTGTAACAACACAGGAGGTTCCTATCACAGTGCCAGAATATACC
CAAGGTATGCATGCAGAAAGTATCATGACTATTGTGATTTTTCCTTATGA
ACCAATATAATCAATGTTTCCAGGAGTCTAACGTTTTGCTATTTTGTTTT
TATTGTCTCATATGTATGATATCTCTTTCCTCTTTGACCCTCATTTTACA
TTATTTATCATTTTACAAAATGTATAATTATTTACAGAGCCTTACTATAC
AAAGAAGCCAACAATGGCAACAGAACAACCAGAGCATCCAGAACCAACTG
AGACGCCAAAGTCGACAGGCAAACCAGAATACACAGAACAGCCAGAACGT
ACAGGACATCCAGAAACAACTGAGGAGCCATGGTCAACAGGCAAACCAGA
ATACACAGAACATCCAGAACCTACAGAACATCCAGAACCAACTGACAAGC
CAAAGTCAACAGGCAAACCAGAATACACTGAACAGCCAGAACCTACAGAA
CATCCAGAACCAACTGAGGAGCCATGGTCAACAGGCAAACCAGAATACAC
AGAACAGCCAGAACCTACAGAACATCTAGAAACAACTGAAAAGCCTTCAT
ACACAGGCAAACCAGAGTACACAGGGAAACCAGAACCCACAGAGGCTGTG
GCAACCACAGAGGGAACCAAACTGGTCACAGTCACCACTGTCACAACTAC
AACTGAAACTGTTGAGGAAAGAACAAGCAAGGCTCCAGAAGTTGGTACGT
AACATTTGCACTGAAAATGACCAAATACAAATCTAAATCATAAAGTTACA
TAAAAAGATATGTTAATTGTTAAGGAAGAGGAACACTGGTTAATTTGTAT
ATTGCATTCAAAACAGACGATCACATACAGCTATCAACAGTTACATGTAT
GCACTTAGAAATGTGTAAACCATGATCATCAACATGTACACTGTATAAAC
GCAAATATTACAGGCTGATAAGATGGTGCAGCCACAGTAGGCCTTTCACA
AGGATAGAATCAAATCTTCCAAAAGTAGATTACTTCTGTCAATCAATCAG
TGTTCTTTAATCATGAAGATGAAGATGAAACGTGAGATGAATCGAAATCT
TTCCTATACCATACCATGCAGAACCTGAAGCAACAAC Coding sequence (CDS) from alignment at Sc0000411:119751..121187+ >transcript:BL96346_cuf8 ID=transcript:BL96346_cuf8|Name=transcript:BL96346_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=2619bp|location=Sequence derived from alignment at Sc0000411:119751..121187+ (Branchiostoma lanceolatum)
AAGTCGGAGGTTGAGACCACACCAAAGTCAGAGGCTGAGACCACAGCAAA
GTCTGAGGCTGAGACCACACCAAAGTCTGAGCTTGAGACCACAACTAAGT
CTGAGTTTAAGACCACACCAATGCCTGAGGTTGAGACAACACCAAGGTCT
GAGGCTGAGACCACACCAAAGTCTGAGGCTGAGACCACATCAAAGTCTGA
GGCTGAGACCACATCAAAGTCAGAGGTTGAGACCACACCCAAGTCTGAGG
TGGAGACCACACCAGAGACAATTATCACCAAGACTACTGTGGTGCAGACT
GTTGCTGTAACAACACAGGAGGTTCCTATCACAGTGCCAGAATATACCCA
AGAGCCTTACTATACAAAGAAGCCAACAATGGCAACAGAACAACCAGAGC
ATCCAGAACCAACTGAGACGCCAAAGTCGACAGGCAAACCAGAATACACA
GAACAGCCAGAACGTACAGGACATCCAGAAACAACTGAGGAGCCATGGTC
AACAGGCAAACCAGAATACACAGAACATCCAGAACCTACAGAACATCCAG
AACCAACTGACAAGCCAAAGTCAACAGGCAAACCAGAATACACTGAACAG
CCAGAACCTACAGAACATCCAGAACCAACTGAGGAGCCATGGTCAACAGG
CAAACCAGAATACACAGAACAGCCAGAACCTACAGAACATCTAGAAACAA
CTGAAAAGCCTTCATACACAGGCAAACCAGAGTACACAGGGAAACCAGAA
CCCACAGAGGCTGTGGCAACCACAGAGGGAACCAAACTGGTCACAGTCAC
CACTGTCACAACTACAACTGAAACTGTTGAGGAAAGAACAAGCAAGGCTC
CAGAAGTTGAACCTGAAGCAACAAAGTCGGAGGTTGAGACCACACCAAAG
TCAGAGGCTGAGACCACAGCAAAGTCTGAGGCTGAGACCACACCAAAGTC
TGAGCTTGAGACCACAACTAAGTCTGAGTTTAAGACCACACCAATGCCTG
AGGTTGAGACAACACCAAGGTCTGAGGCTGAGACCACACCAAAGTCTGAG
GCTGAGACCACATCAAAGTCTGAGGCTGAGACCACATCAAAGTCAGAGGT
TGAGACCACACCCAAGTCTGAGGTGGAGACCACACCAGAGACAATTATCA
CCAAGACTACTGTGGTGCAGACTGTTGCTGTAACAACACAGGAGGTTCCT
ATCACAGTGCCAGAATATACCCAAGAGCCTTACTATACAAAGAAGCCAAC
AATGGCAACAGAACAACCAGAGCATCCAGAACCAACTGAGACGCCAAAGT
CGACAGGCAAACCAGAATACACAGAACAGCCAGAACGTACAGGACATCCA
GAAACAACTGAGGAGCCATGGTCAACAGGCAAACCAGAATACACAGAACA
TCCAGAACCTACAGAACATCCAGAACCAACTGACAAGCCAAAGTCAACAG
GCAAACCAGAATACACTGAACAGCCAGAACCTACAGAACATCCAGAACCA
ACTGAGGAGCCATGGTCAACAGGCAAACCAGAATACACAGAACAGCCAGA
ACCTACAGAACATCTAGAAACAACTGAAAAGCCTTCATACACAGGCAAAC
CAGAGTACACAGGGAAACCAGAACCCACAGAGGCTGTGGCAACCACAGAG
GGAACCAAACTGGTCACAGTCACCACTGTCACAACTACAACTGAAACTGT
TGAGGAAAGAACAAGCAAGGCTCCAGAAGTTGAACCTGAAGCAACAAAGT
CGGAGGTTGAGACCACACCAAAGTCAGAGGCTGAGACCACAGCAAAGTCT
GAGGCTGAGACCACACCAAAGTCTGAGCTTGAGACCACAACTAAGTCTGA
GTTTAAGACCACACCAATGCCTGAGGTTGAGACAACACCAAGGTCTGAGG
CTGAGACCACACCAAAGTCTGAGGCTGAGACCACATCAAAGTCTGAGGCT
GAGACCACATCAAAGTCAGAGGTTGAGACCACACCCAAGTCTGAGGTGGA
GACCACACCAGAGACAATTATCACCAAGACTACTGTGGTGCAGACTGTTG
CTGTAACAACACAGGAGGTTCCTATCACAGTGCCAGAATATACCCAAGAG
CCTTACTATACAAAGAAGCCAACAATGGCAACAGAACAACCAGAGCATCC
AGAACCAACTGAGACGCCAAAGTCGACAGGCAAACCAGAATACACAGAAC
AGCCAGAACGTACAGGACATCCAGAAACAACTGAGGAGCCATGGTCAACA
GGCAAACCAGAATACACAGAACATCCAGAACCTACAGAACATCCAGAACC
AACTGACAAGCCAAAGTCAACAGGCAAACCAGAATACACTGAACAGCCAG
AACCTACAGAACATCCAGAACCAACTGAGGAGCCATGGTCAACAGGCAAA
CCAGAATACACAGAACAGCCAGAACCTACAGAACATCTAGAAACAACTGA
AAAGCCTTCATACACAGGCAAACCAGAGTACACAGGGAAACCAGAACCCA
CAGAGGCTGTGGCAACCACAGAGGGAACCAAACTGGTCACAGTCACCACT
GTCACAACTACAACTGAAACTGTTGAGGAAAGAACAAGCAAGGCTCCAGA
AGTTGAACCTGAAGCAACA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000411 | genome | Sc0000411:119751..121187 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96346_cuf8 |
| Biotype | protein_coding |
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