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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96317_cuf7 >transcript:BL96317_cuf7-protein ID=transcript:BL96317_cuf7-protein|Name=transcript:BL96317_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=237bp
FNDNPYVWDRSAEDIHSSVVDVTLEDELGNEIPVKGLTEEITIVLQNNPD
MFQVGHLVNYKYYDNATMVLRDFKARENQTFGITLTVRTTTYISSANIYG
KMGGDPNDTHHDFSKLLTSDDFDLTGGVGDYTFTAFFLIFVEQVNNGSGQ
YTLGLQIEECLTHGCNYTTDMVSMGCRFWDVDDNAWKGEGCKVSPKTTRE
ETVCLCDHLTPFGVDIVRVPNYDPYHTRTVLLTDSSL Run BLAST on NCBI mRNA from alignment at Sc0000111:145790..152502+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96317_cuf7 ID=transcript:BL96317_cuf7|Name=transcript:BL96317_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=6713bp|location=Sequence derived from alignment at Sc0000111:145790..152502+ (Branchiostoma lanceolatum)
TTCAATGACAACCCGTACGTTTGGGACAGGTCGGCAGAGGACATCCACTC
GTCTGTCGTGGACGTCACGCTGGAAGACGAACTGGGGAACGAAATCCCTG
TTAAGGTGAGTGCAACAGCGACTTTCTTCTCTTATATTTATGTTATGTTT
ATGATGTTGTTAATGATAGACTTTATTGCACAACAAGTGTACAGGTATTA
CGATTGGCATCTTTTTCAATAAAACAAAACTTTCTACGAGACTAATGCAA
CGTTACCTTTAAAGTTACAAAAGACTATTATGCAGTATGGGATGAATACG
TAGTTATACAATTATTATTTTGGGATTTCTAACGTATATGAATATACATT
TAGAATACAACACGGAGTATTCCGTATCACCCGAGGTAACAGCCCGACCG
CGGGTCGGATCCGACCCGCGGGAGGGCTGGGACCGAGGGTGATGCGGAAT
ACAACGTGTTGTATTTTATTTTTGTCATGCCCACCCGAAAAAATTTCAAT
GCAGAAAGCGCCAAAGGTTGAGGGACTTTTGTGTCCTCGAATACAAAACT
GTAACAGCATTGATTCCAACCTCCAAATCCGGTATTCGAATTTTCGCTTC
GCTCACTCGGTGGTTTTATTCGGTGGTTATAGCACATGACCAGGCGTTAT
GACACCATATACACCTCGGGGCGGATCATTAACCCTTAATTATCACACGG
TCAGGAACACTCGTATCAGGCCCAGGTATGACAGACATCGTCCAATACTT
ACAATGCAAGGGTTGTCACGTGTGAAAATGTACAAACATCTAGATATAGT
AACAAGATATGGAGACTGAAACTTAACGATAGTAAATGTGTTTCTTAAAC
ATATCATTACAGGGCCTGACTGAAGAAATCACCATCGTCCTTCAAAACAA
CCCGGACATGTTCCAGGTCGGTCATCTCGTGAACTACAAGTACTACGACA
ACGCCACGATGGTCCTGCGAGACTTCAAAGCTCGCGAGAACCAGACGTTC
GGGATCACGCTAACTGTGCGGACCACCACTTACATCTCATCAGCTAACAT
ATACGGCAAGATGGGCGGAGATCCGAACGACACACATCACGATTTTAGGT
ACGTCAACATGTACATGACAATGGGCAACAAACATTCGTTGTACGTAACC
AAGTGTTTTTATCTTCTGTCACCTTCCTAAGGGCAATTTTGACCGGTTCA
CTTAGCTCTGCTCTTATAGGTGTGTCACTTCTTACACATGCGGTTCAAAC
GTAAAGTACAATGTATGTCTGGGACCGCATCTGTAAGCAGCGACACCTAT
AGCTGCAGTGCAAAGTAAACTAGTCAGAATTTTCCAGTCAGAACTGTCAT
GAGGAAGAAGAAAGACGGTCGCCGAAACATCGGTGTAAATAAAAAATGGA
GCAAGCTTGTGACAACATGAGTACTAGTCATATCTTAGGAAATTCCAACA
CTACAACCTTTTTCTGTCTTACCTAACTGTTGTATACGTTTGACGACTTT
ACTGCTAACAAGGTACCATAATACCCTTTCAGGACCAAGGAGAAACCCAC
TTCGTAGTACACATTACAGTTTGTGCTAGGTTCTTGTCTTCAGTTTTTTT
TTTCATTTCTTGCCACCTGTAGCAAACTGCTGACATCAGACGACTTTGAC
CTGACGGGCGGCGTGGGGGACTACACCTTCACCGCGTTCTTCTTAATCTT
CGTGGAGCAGGTCAACAACGGGAGTGGACAGTACACGCTGGGACTGCAGA
TTGAAGGTACGGTCAGCTGTGTCTCACTTCAGCTAAATATTATTCTCAGT
AACTGAGAAAAAGGTCAGAATTCCTTAACTTTTTTTTATTTGCAAATTCA
AGCCGTAGGCTCATTGCATGGGTATAAACAGCAGAAAGGGTAACAATGGT
AACAATATCATGGGAATCCGTCGTTCCTTGGTTCCGTTATTCTCCTTAGA
AGATTTTCACAATAATGCCCCTGCAGTTCCAGAGCAAGCTGCTAGGGGGC
TCAAACCTACGCCACTTCTTTATTACATCACGAGCTGTCTGCCACCCAAA
AATCAAGACCATAGCACGTCCAAGTCAAAAGATACAAAAACGGAAGTTCT
GCTGCTGTACCAAGGTCACATGCCAGGGGGCTCAACATCAATCTTGAACT
TTGGCTTTACAACACCTGCCCAAATAACAAATATCATTGTAATCCATCAC
GAAGTTTTGGAGTTATGCTGACTACAGTAGTGCGGAAGCACATACACACA
CACACACACACACACACACACACACACACACACACACACACACACACNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCACACACACACACACACGCACACGCACACAC
ACACACACGCGCGCGCGCACACGTACACGCACACGCACGCACGCACACAC
ACACACGCACAAGCACACACACACGCGCGCGCACACACGTACACGCACAC
GCACGCACACACACGCGCGCATCTAAAAACAGTACCTCCTTCGGAAGTGA
GCCTCCTACCCGGAGGCAGCATATCGCCAGCCCCCCGGGTGGAAGTAACT
ATCTGGGTAATAACGAGCCTATTGTAGCGGCACGGGTCTTCGCCACTCCG
GGTTTGACGCACACGCCGCTTGATTCAAACGCACGGCGTATCCGCCTCGG
GCTCTTAGCGCACCAGAACTTAATGCTTCTGGATTTGTTATTTTTTCTGG
GTTCAGAAATACAAGTATGAAATGTCAAATTCCATACACACCAATCGAGC
GTGCACCCGGCGCCGTTACCCACTTGATGATGCCCCCTTCTGGCGTGCAT
CATATCCAGTACAATCAAACTGCTGCATTTTATTTCATTTTTAACTTAGA
TTGATCGAAAGCGACTTGAAAATGAAGAGGCATGGAGAAGCTGACATTTA
AGCTTGAAAACACAGCCTCGGGTGTCCATAACGGTGGAAGTACTTAACTT
AACGGACGGAGGCTTGACGTACATCGTTCGTGTTTCCTGCTGTCATGAAT
TCAACTTTCAAAGCCTCCGGAATTGTTATCTGCGGTCCCGAAAGATCAAT
TTGTAATGTGTTATTCATTCTGGGCTCGGGCACCGGATCTCATTACGTCT
TAGGTGGTACCCCCCCTCTCGGTCGGGCCTGTATTAGTTCAAGTAGACTG
CATTTTTCTCATCTCATTCCCAATATGATCGAAGTGTTGCATTTTCTTCA
CAGTTTTGCGACTGGATATGTATCAAAAGTGAAAAAAAGGCCGGTGAGAT
CTAGACTTGAAAATCAGCCAGTATATAACGATTGAAGTACTTAACGAATC
ATGGCGATTATATCGGTGCTTGTCACTACGGAATAGACGTTTGACGTCCA
TGACGATTGATTCGAACCTACAACGTTCAAGTTTCGTGCCCCGGCTCTCT
TGGTTTCAACTTCCACAGCCTCCGGGATTGCCTTATTCGGTAACTATGCA
CCAGACGCTATTGCGTCCTTGCCAGTACCCCCTTCGGGCGTATATTAGCT
CAAGTATACTATTTCAGATTCAGAATATATGAATATGAATTGTACATCAA
AATAGATCGGCGGGGTCTAGGCTTGAAAAACAGCCAGTTTATAACAATTG
AAGTACTTAACGAATCATGGCGATTATGACTGTGCGGGTCGTTGTGGAAT
AGACGTTTGACGTCCATGTCGATTGATTGAAACCTACAATGTTCAACTTT
CGTGCGCTGGCTCTCATGGATTTCACAGCCTCCGGCACACACACACACAC
ACACACGCACACACACACACACACACACACACACACACACACACACACAC
ACACAAACACACACAGACACACCCAAAACTGTATCTCCATTTTTCATAGA
GATAATAAGTGTCTATTCTATGTATCTACTAATATTTCTACATACAACAT
TACTGGGGGGTTTGACTTCTTCTTTGGAGGCAGTGGCTGATTATACATTA
TTTACTTACCTTACTTAGCAATGGATATCAAGATAAGGCTTTTAGTCAAC
GTCATTACAGTTAAGCTGTTTGTTTCATAAGTGTTGCTATCATCTACTCG
AACCCCTTGGCTATAATTATAAAATTACACTTGTCTTTTAAATCGCCTTT
GTAAGACTCCATCGGTCGCCCAAAAAATACTGCTAGTTGAAATAGGCCAA
ATAGACAAATAACTCCTTTAGTATGTTATCTGTTTATTCTGTCAATTTTT
CGTCTTTTTTTCCAGCGACCTATGGAGTATGGGTGAGGCTACCTAGATTT
CGCTTTATTCCAAACAGAACAGTTGTGTACCCTTTAACTCTACAACCTTC
TCTATTCCAGAGTGCCTGACGCATGGATGTAATTACACCACAGACATGGT
CAGCATGGGATGTCGCTTCTGGGATGTTGACGACAACGCCTGGAAGGGCG
AGGGTTGCAAGGTAGACTATTTTACCTTTGGATTGTGTGTGTGTTTGTGT
GTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTCTGTGT
GTGTGTGCCTGTGTCTGTCTGTGTCTGTGTGCCTGTGTGTGTGCCTGTGT
CTGTGTCTGTGTGTTTGTTTCAGTTGGTGTGTGTCCGTAGTTCTTTGATT
GCACTGTCAGTTGAGTGGCAGGGAGTAAAGTACGAAGATGACTGCAAATG
TCAGACTTGCTAGGAGACAAGAAGTATACGTCAGCAGTGGTAAAACTAGT
TGTTCATCAGATTTGACAGTCCTGGTCATGGGGTCAATGGAAGAGGCTAT
TCCTATACGGGGAAGTAACGTTATATTTTTGGGCCTGTCTGTTTGTCTCC
AGTGGGTTTTCGCTGTTATATATTTTTCAATAATATGTTAGTTAACGATA
GAATATTACAATCCACATTTTTACCATTCGCGCTATGATTCTAATCGTAC
TATCAACAAAACTGTAAACAATGTTGATCATTTGTTGGCGTGTTTTTAAC
ACATAAAGTGACTATTGTTCATCCCCAGGTCAGCCCGAAGACTACTCGGG
AGGAAACGGTGTGCCTGTGTGACCACCTGACTCCGTTCGGCGTGGACATC
GTCCGGGTCCCCAACTATGATCCGTACCACACCCGAACAGTCCTTCTGAC
AGACAGCTCTCTG Coding sequence (CDS) from alignment at Sc0000111:145790..152502+ >transcript:BL96317_cuf7 ID=transcript:BL96317_cuf7|Name=transcript:BL96317_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=3555bp|location=Sequence derived from alignment at Sc0000111:145790..152502+ (Branchiostoma lanceolatum)
TTCAATGACAACCCGTACGTTTGGGACAGGTCGGCAGAGGACATCCACTC
GTCTGTCGTGGACGTCACGCTGGAAGACGAACTGGGGAACGAAATCCCTG
TTAAGGGCCTGACTGAAGAAATCACCATCGTCCTTCAAAACAACCCGGAC
ATGTTCCAGGTCGGTCATCTCGTGAACTACAAGTACTACGACAACGCCAC
GATGGTCCTGCGAGACTTCAAAGCTCGCGAGAACCAGACGTTCGGGATCA
CGCTAACTGTGCGGACCACCACTTACATCTCATCAGCTAACATATACGGC
AAGATGGGCGGAGATCCGAACGACACACATCACGATTTTAGCAAACTGCT
GACATCAGACGACTTTGACCTGACGGGCGGCGTGGGGGACTACACCTTCA
CCGCGTTCTTCTTAATCTTCGTGGAGCAGGTCAACAACGGGAGTGGACAG
TACACGCTGGGACTGCAGATTGAAGAGTGCCTGACGCATGGATGTAATTA
CACCACAGACATGGTCAGCATGGGATGTCGCTTCTGGGATGTTGACGACA
ACGCCTGGAAGGGCGAGGGTTGCAAGGTCAGCCCGAAGACTACTCGGGAG
GAAACGGTGTGCCTGTGTGACCACCTGACTCCGTTCGGCGTGGACATCGT
CCGGGTCCCCAACTATGATCCGTACCACACCCGAACAGTCCTTCTGACAG
ACAGCTCTCTGTTCAATGACAACCCGTACGTTTGGGACAGGTCGGCAGAG
GACATCCACTCGTCTGTCGTGGACGTCACGCTGGAAGACGAACTGGGGAA
CGAAATCCCTGTTAAGGGCCTGACTGAAGAAATCACCATCGTCCTTCAAA
ACAACCCGGACATGTTCCAGGTCGGTCATCTCGTGAACTACAAGTACTAC
GACAACGCCACGATGGTCCTGCGAGACTTCAAAGCTCGCGAGAACCAGAC
GTTCGGGATCACGCTAACTGTGCGGACCACCACTTACATCTCATCAGCTA
ACATATACGGCAAGATGGGCGGAGATCCGAACGACACACATCACGATTTT
AGCAAACTGCTGACATCAGACGACTTTGACCTGACGGGCGGCGTGGGGGA
CTACACCTTCACCGCGTTCTTCTTAATCTTCGTGGAGCAGGTCAACAACG
GGAGTGGACAGTACACGCTGGGACTGCAGATTGAAGAGTGCCTGACGCAT
GGATGTAATTACACCACAGACATGGTCAGCATGGGATGTCGCTTCTGGGA
TGTTGACGACAACGCCTGGAAGGGCGAGGGTTGCAAGGTCAGCCCGAAGA
CTACTCGGGAGGAAACGGTGTGCCTGTGTGACCACCTGACTCCGTTCGGC
GTGGACATCGTCCGGGTCCCCAACTATGATCCGTACCACACCCGAACAGT
CCTTCTGACAGACAGCTCTCTGTTCAATGACAACCCGTACGTTTGGGACA
GGTCGGCAGAGGACATCCACTCGTCTGTCGTGGACGTCACGCTGGAAGAC
GAACTGGGGAACGAAATCCCTGTTAAGGGCCTGACTGAAGAAATCACCAT
CGTCCTTCAAAACAACCCGGACATGTTCCAGGTCGGTCATCTCGTGAACT
ACAAGTACTACGACAACGCCACGATGGTCCTGCGAGACTTCAAAGCTCGC
GAGAACCAGACGTTCGGGATCACGCTAACTGTGCGGACCACCACTTACAT
CTCATCAGCTAACATATACGGCAAGATGGGCGGAGATCCGAACGACACAC
ATCACGATTTTAGCAAACTGCTGACATCAGACGACTTTGACCTGACGGGC
GGCGTGGGGGACTACACCTTCACCGCGTTCTTCTTAATCTTCGTGGAGCA
GGTCAACAACGGGAGTGGACAGTACACGCTGGGACTGCAGATTGAAGAGT
GCCTGACGCATGGATGTAATTACACCACAGACATGGTCAGCATGGGATGT
CGCTTCTGGGATGTTGACGACAACGCCTGGAAGGGCGAGGGTTGCAAGGT
CAGCCCGAAGACTACTCGGGAGGAAACGGTGTGCCTGTGTGACCACCTGA
CTCCGTTCGGCGTGGACATCGTCCGGGTCCCCAACTATGATCCGTACCAC
ACCCGAACAGTCCTTCTGACAGACAGCTCTCTGTTCAATGACAACCCGTA
CGTTTGGGACAGGTCGGCAGAGGACATCCACTCGTCTGTCGTGGACGTCA
CGCTGGAAGACGAACTGGGGAACGAAATCCCTGTTAAGGGCCTGACTGAA
GAAATCACCATCGTCCTTCAAAACAACCCGGACATGTTCCAGGTCGGTCA
TCTCGTGAACTACAAGTACTACGACAACGCCACGATGGTCCTGCGAGACT
TCAAAGCTCGCGAGAACCAGACGTTCGGGATCACGCTAACTGTGCGGACC
ACCACTTACATCTCATCAGCTAACATATACGGCAAGATGGGCGGAGATCC
GAACGACACACATCACGATTTTAGCAAACTGCTGACATCAGACGACTTTG
ACCTGACGGGCGGCGTGGGGGACTACACCTTCACCGCGTTCTTCTTAATC
TTCGTGGAGCAGGTCAACAACGGGAGTGGACAGTACACGCTGGGACTGCA
GATTGAAGAGTGCCTGACGCATGGATGTAATTACACCACAGACATGGTCA
GCATGGGATGTCGCTTCTGGGATGTTGACGACAACGCCTGGAAGGGCGAG
GGTTGCAAGGTCAGCCCGAAGACTACTCGGGAGGAAACGGTGTGCCTGTG
TGACCACCTGACTCCGTTCGGCGTGGACATCGTCCGGGTCCCCAACTATG
ATCCGTACCACACCCGAACAGTCCTTCTGACAGACAGCTCTCTGTTCAAT
GACAACCCGTACGTTTGGGACAGGTCGGCAGAGGACATCCACTCGTCTGT
CGTGGACGTCACGCTGGAAGACGAACTGGGGAACGAAATCCCTGTTAAGG
GCCTGACTGAAGAAATCACCATCGTCCTTCAAAACAACCCGGACATGTTC
CAGGTCGGTCATCTCGTGAACTACAAGTACTACGACAACGCCACGATGGT
CCTGCGAGACTTCAAAGCTCGCGAGAACCAGACGTTCGGGATCACGCTAA
CTGTGCGGACCACCACTTACATCTCATCAGCTAACATATACGGCAAGATG
GGCGGAGATCCGAACGACACACATCACGATTTTAGCAAACTGCTGACATC
AGACGACTTTGACCTGACGGGCGGCGTGGGGGACTACACCTTCACCGCGT
TCTTCTTAATCTTCGTGGAGCAGGTCAACAACGGGAGTGGACAGTACACG
CTGGGACTGCAGATTGAAGAGTGCCTGACGCATGGATGTAATTACACCAC
AGACATGGTCAGCATGGGATGTCGCTTCTGGGATGTTGACGACAACGCCT
GGAAGGGCGAGGGTTGCAAGGTCAGCCCGAAGACTACTCGGGAGGAAACG
GTGTGCCTGTGTGACCACCTGACTCCGTTCGGCGTGGACATCGTCCGGGT
CCCCAACTATGATCCGTACCACACCCGAACAGTCCTTCTGACAGACAGCT
CTCTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000111 | genome | Sc0000111:145790..152502 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96317_cuf7 |
| Biotype | protein_coding |
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