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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96313_cuf3 >transcript:BL96313_cuf3-protein ID=transcript:BL96313_cuf3-protein|Name=transcript:BL96313_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=123bp
VHCRGDGTWSGSVPACRAIQCSSLTPIAHGYMVGSNSFRNVVTFHCFPGY
ELVGDGSLTCQADRTWSGPLPTCSIVKCPAQTSPTNGAKVGNNFYNDVVT
FMCVSGYQLDGESSVGCQADGSW Run BLAST on NCBI mRNA from alignment at Sc0000111:126305..127825+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96313_cuf3 ID=transcript:BL96313_cuf3|Name=transcript:BL96313_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=1521bp|location=Sequence derived from alignment at Sc0000111:126305..127825+ (Branchiostoma lanceolatum)
GTCCACTGCCGGGGTGACGGAACCTGGAGCGGAAGTGTCCCCGCTTGTCG
AGGTAAATTTAGAGCAGCGGTGCGTCGCGCAGGTAAAGTGGGTGTGTTGC
GCACGAAAGGTGGTCGTGTTGTGCAGGTAAGGTAGGGGTGTTGCGCAGGT
AAAGTAGGTGTGTTGCGCAGGTAAAGTGGGTGAGTTGCGCAGGTAAAGTG
GGTGTGTTGTGCAGGTAAAGTAGGAGTGTTGCACAGTACAGGCAAAGTAG
GGTGTGTTGCGAAAGTTAAGTGGGGGTGCTGTGCAGGTAAAGTGGGTATG
CTGCGCATGTAAAGTGGGTGTGTTGCGCATGTTAATTAGGGGTGTTGCGC
AGCAAATAGGAGTGTTGCTAATTGTACTTGTCGGCCACGGTATACTATGA
TTCAATGTGGAACTTTAAAGCCATCACAAATAAAACAACGTGGGATCGCG
TCGGGCAATTGGCATGGTGTTAGGCCAGGTTTGTGAGAAACTTCAGAGTT
TTGGTTTAAAACCTGGTTACTTCAGTTTTTTCCATATAGTCCCTAACGAA
AGACAGCGGATAATGTCTAACTGTTTCCAAATCGTACGTAGTTGCTTGAG
TAACTGGGCGAATAAAGGTATTTCATTCACTGCGTATCTCATACTGCAGC
CATACAGTGCTCCAGTCTAACTCCCATCGCGCACGGCTACATGGTCGGCT
CCAACTCCTTCCGGAATGTGGTGACGTTTCACTGTTTCCCCGGATACGAG
CTGGTGGGGGACGGAAGTCTGACGTGCCAAGCGGACCGGACCTGGAGCGG
CCCCCTACCGACTTGTTCTAGTAGTTCATTCACTTATCTACTGACCCAAA
TAAATTGGATATCATTAACAATGTTGGAAAATGTCATTTGAATCAAGCAC
AGCTTTTTCTCGTCTCTTTGTGTATATCTTAGAAATATATGTTCAGACTT
GATTAATATTGAATGGTCAAAACGCATGATAAAAATCAATTTCCCAATAT
TAGACATAAATTGAAAGTGTGGAAACGTTCCCATAATATAATTAAAAAAA
CAAACATTGTTGCTATATAAACTAGCTTTCATGAGCGTTGTACGCTCGTT
TTCATTTAATTGTACCTATTTTGGAACTTCCGTTACCGTTTGAAGTAAGA
CGTTTCTGACATTAAGATGTGCTACATATAAGGTGCCAAACTGTCGTTTT
TAAAAGCCATAAATGTTTTACGTCGTCATAAAAACGACAGTTTGGCACCT
TATATGTGGTAAATCTTATTGTCAGGAACGTCTTACTTCAAACGGAAACG
GAAGTTACAAAATGTGTACATTTAAATGAGAACGAGCGTGTAACGTTGTG
TACTTTATGTTGATTCGTACTTTAGTTGTGAAGTGTCCTGCCCAAACGTC
TCCCACCAACGGAGCCAAGGTTGGCAACAACTTCTACAATGACGTGGTGA
CGTTCATGTGCGTGTCGGGTTACCAGCTGGACGGGGAGTCTAGCGTCGGG
TGTCAGGCCGACGGTTCATGG Coding sequence (CDS) from alignment at Sc0000111:126305..127825+ >transcript:BL96313_cuf3 ID=transcript:BL96313_cuf3|Name=transcript:BL96313_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=1107bp|location=Sequence derived from alignment at Sc0000111:126305..127825+ (Branchiostoma lanceolatum)
GTCCACTGCCGGGGTGACGGAACCTGGAGCGGAAGTGTCCCCGCTTGTCG
AGCCATACAGTGCTCCAGTCTAACTCCCATCGCGCACGGCTACATGGTCG
GCTCCAACTCCTTCCGGAATGTGGTGACGTTTCACTGTTTCCCCGGATAC
GAGCTGGTGGGGGACGGAAGTCTGACGTGCCAAGCGGACCGGACCTGGAG
CGGCCCCCTACCGACTTGTTCTATTGTGAAGTGTCCTGCCCAAACGTCTC
CCACCAACGGAGCCAAGGTTGGCAACAACTTCTACAATGACGTGGTGACG
TTCATGTGCGTGTCGGGTTACCAGCTGGACGGGGAGTCTAGCGTCGGGTG
TCAGGCCGACGGTTCATGGGTCCACTGCCGGGGTGACGGAACCTGGAGCG
GAAGTGTCCCCGCTTGTCGAGCCATACAGTGCTCCAGTCTAACTCCCATC
GCGCACGGCTACATGGTCGGCTCCAACTCCTTCCGGAATGTGGTGACGTT
TCACTGTTTCCCCGGATACGAGCTGGTGGGGGACGGAAGTCTGACGTGCC
AAGCGGACCGGACCTGGAGCGGCCCCCTACCGACTTGTTCTATTGTGAAG
TGTCCTGCCCAAACGTCTCCCACCAACGGAGCCAAGGTTGGCAACAACTT
CTACAATGACGTGGTGACGTTCATGTGCGTGTCGGGTTACCAGCTGGACG
GGGAGTCTAGCGTCGGGTGTCAGGCCGACGGTTCATGGGTCCACTGCCGG
GGTGACGGAACCTGGAGCGGAAGTGTCCCCGCTTGTCGAGCCATACAGTG
CTCCAGTCTAACTCCCATCGCGCACGGCTACATGGTCGGCTCCAACTCCT
TCCGGAATGTGGTGACGTTTCACTGTTTCCCCGGATACGAGCTGGTGGGG
GACGGAAGTCTGACGTGCCAAGCGGACCGGACCTGGAGCGGCCCCCTACC
GACTTGTTCTATTGTGAAGTGTCCTGCCCAAACGTCTCCCACCAACGGAG
CCAAGGTTGGCAACAACTTCTACAATGACGTGGTGACGTTCATGTGCGTG
TCGGGTTACCAGCTGGACGGGGAGTCTAGCGTCGGGTGTCAGGCCGACGG
TTCATGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000111 | genome | Sc0000111:126305..127825 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96313_cuf3 |
| Biotype | protein_coding |
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