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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96312_cuf1 >transcript:BL96312_cuf1-protein ID=transcript:BL96312_cuf1-protein|Name=transcript:BL96312_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=127bp
GYELNGATSIMCRGDGTWSGVVPTCTLVHCPLLTAPSDGTVSGDNAYNDV
LQFTCNSGYELQGSATSRCQADGTWSDIAPTCAAVECPTLEAPEHGEMTG
NRFYYPYEVRVACNSGYVLVGSSSLTC Run BLAST on NCBI mRNA from alignment at Sc0000111:122138..124677+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96312_cuf1 ID=transcript:BL96312_cuf1|Name=transcript:BL96312_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2540bp|location=Sequence derived from alignment at Sc0000111:122138..124677+ (Branchiostoma lanceolatum)
GGGGTACGAACTCAACGGGGCGACCAGCATCATGTGCCGGGGCGACGGCA
CCTGGAGCGGCGTTGTCCCCACCTGCACACGTAAGGCCTCGTTTCTTTTT
GTATAATCATGTGTGATGCGAAAAAGCGGTCTGCATTTTTACCGGTATGC
CCCGGAATGCCCTTTTTACACCGGAATGCCCATCACTAATTGTTCAGTGA
TTCCTCGTTCCTTGGGCCTTAAATGTATCATTTCATGCCAAAAGACAGCA
ACCTGTTATGTTTACTCATCAAAGCATGGTGTATTCAGATAGAATTCACC
CTCCTTAATGAGCATTCCGGGGCATTACGGTAAAAAGGCAGACCCCGCAA
ACGTCTCTATGTCTATTCAGAGATTAACCATTATATCAACAAATATTTAC
ACACCATTTACATAAACAAAGTAAAGCAATTGCCAGCAAGGTTTCAACTA
GTGCCCTGGTCCTTGATTTGACCCGAAGCCTACGTCACTTGACCTGCGCG
GAAGTGTGGAGTCAGCAACGGGTCAAAGGTACCCGGCAGTCGGTATCAGC
CCCTGTCTCTGTTGAGGGATGGTCGATGGGCTCTAATGTAGATTGCCTCT
TTCACTCCTCTTAGGAAGAGGCAATGAAATGGAATCCAGCCTTGTTAGAT
TTAGTCTGCTTCCAATTATCGCTACTCCGACAACGCGACACTAACATACA
CACATTAACACACATAGATACACTAACACACACACACACACAATGACACA
CACACAAACACGCACTCACACAGTCAATAACACACACAATAATACCAATT
CACACGCACACACACACACACAAACTATCAGACATACACACACTAACCCT
ACAGGATGTAGACACACAGCCGAACATATGGTGGCCTCCAGGACTATGAT
ACTTAATTAAGAGCCTTCTCTGACCCTGTTTCAGTGGTGCATTGTCCGCT
GCTAACAGCACCCTCAGACGGTACCGTGTCGGGCGACAATGCTTACAACG
ACGTGCTCCAGTTCACCTGCAACTCAGGATATGAGCTTCAGGGTTCGGCA
ACCAGCAGATGCCAAGCAGACGGAACATGGAGTGACATCGCTCCAACCTG
TGCAGGTAAATTACAGTTTTGCGTAGCAAAACCTTTGTTGGATCCGTTGG
CATGTTTGTTGGCCGCCATATTGAATTGTGACGTCACATGGAGTGACATG
GAGTGACAGCACTCTAACCTGTGCAGGTAAATTACAGGATTGCGTAGCAA
AACCTTTGTTGGATCCGTTGGCATGTGTGTTGGCCGCCATCTTGAATTGT
GACGTCACAGGGTCGCCATACAATTTTATTGGGAGGTGTGTTTTGGGGGT
CGCTAGGGTTCTCTCTATTTTTAGCAAATCGACACGAAACTATCACACAT
TCAAAAGAAAAACAATACCAATTCATATTTATAAAAAGACTCCGTAATTG
CTAAACTAACATAGCAAACTTGAAGTATATGTAGCACAAATACCTACCTC
TAGTTCGATTTGATTGATTTATTTGGCTGTAAATAAAGTACAGCCAAATA
TTCAAAGTTTGTTTCTTTCCTGTATGGATTGTGTATCAAAATATTTCAAT
GCATCTCATCTCATCTATCCAGAAAGTCTGACCATTGGACCATTTGGGCA
CAGAAAAAGATCTGACGACCAGTTTTCTCCACCCTACTCGCTTTACCTTT
TCTTCGTGATGTTTCACTTAGTGCCAAACCTTTCCATTCTCTGTTGTAAA
TGTTATCCTCCCCTTTTTTCCGTTGCCTACCCCTCGTTCTTATACCCTGG
ACGGTATGATTGTTTTAGCCTGGACTCCAGCCTTTTTAGCTTTGGTTCGC
TTGCAACGTCGCTAGAGTAGTGACGTTGAAAGCAAACCAAAGCTAACAAG
GTTGGACTCCTGGCTATGATAGTTCTGGATAGGCCGAAGAACGTGAGTCG
TATAACCGTACCACTGCATACGAACATCACATTTCTGCTCAATATAATAT
TCCATCATCATCTTGTCGTGAGAGTGTCACGGATGAACGTCACCCTCCTC
CTCCAGTCCTCCCTGTCGTCCATTGCCCTCGGTAGTTCTTCTAAATTGCA
GCCTGCATCCTCACACAGCTGCTGTATGTAAGTTGTGCGTGGTCTGCCTA
CACTTGCATGTCCATGTTTTGGTGCCCACAAAATAACGTCGCTGATGATC
TCTTCCTTACTCCTCCAGGAATGACCAGCGAAACGTAATCTCCTCTTACG
GATATGGAGGGTAAATCCCCATATAGTAGGTTCTTTGTGGGGTGTTTCTT
CCAGGTGATGGAACGTAGCAGCTTTGTGTAGATGCCATCTAGTTTTCTCT
CAAGACGTCTTGTTAATAATATATTTTCTTTTGAAATATTTTTTCATCAT
TGTTCAGCTGTGGAGTGTCCGACACTGGAAGCTCCTGAACACGGTGAAAT
GACAGGCAACAGGTTTTACTACCCGTATGAAGTTAGAGTCGCCTGTAACT
CCGGATACGTACTTGTCGGAAGCTCCTCCTTGACATGCCA Coding sequence (CDS) from alignment at Sc0000111:122138..124677+ >transcript:BL96312_cuf1 ID=transcript:BL96312_cuf1|Name=transcript:BL96312_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1143bp|location=Sequence derived from alignment at Sc0000111:122138..124677+ (Branchiostoma lanceolatum)
GGGTACGAACTCAACGGGGCGACCAGCATCATGTGCCGGGGCGACGGCAC
CTGGAGCGGCGTTGTCCCCACCTGCACACTGGTGCATTGTCCGCTGCTAA
CAGCACCCTCAGACGGTACCGTGTCGGGCGACAATGCTTACAACGACGTG
CTCCAGTTCACCTGCAACTCAGGATATGAGCTTCAGGGTTCGGCAACCAG
CAGATGCCAAGCAGACGGAACATGGAGTGACATCGCTCCAACCTGTGCAG
CTGTGGAGTGTCCGACACTGGAAGCTCCTGAACACGGTGAAATGACAGGC
AACAGGTTTTACTACCCGTATGAAGTTAGAGTCGCCTGTAACTCCGGATA
CGTACTTGTCGGAAGCTCCTCCTTGACATGCGGGTACGAACTCAACGGGG
CGACCAGCATCATGTGCCGGGGCGACGGCACCTGGAGCGGCGTTGTCCCC
ACCTGCACACTGGTGCATTGTCCGCTGCTAACAGCACCCTCAGACGGTAC
CGTGTCGGGCGACAATGCTTACAACGACGTGCTCCAGTTCACCTGCAACT
CAGGATATGAGCTTCAGGGTTCGGCAACCAGCAGATGCCAAGCAGACGGA
ACATGGAGTGACATCGCTCCAACCTGTGCAGCTGTGGAGTGTCCGACACT
GGAAGCTCCTGAACACGGTGAAATGACAGGCAACAGGTTTTACTACCCGT
ATGAAGTTAGAGTCGCCTGTAACTCCGGATACGTACTTGTCGGAAGCTCC
TCCTTGACATGCGGGTACGAACTCAACGGGGCGACCAGCATCATGTGCCG
GGGCGACGGCACCTGGAGCGGCGTTGTCCCCACCTGCACACTGGTGCATT
GTCCGCTGCTAACAGCACCCTCAGACGGTACCGTGTCGGGCGACAATGCT
TACAACGACGTGCTCCAGTTCACCTGCAACTCAGGATATGAGCTTCAGGG
TTCGGCAACCAGCAGATGCCAAGCAGACGGAACATGGAGTGACATCGCTC
CAACCTGTGCAGCTGTGGAGTGTCCGACACTGGAAGCTCCTGAACACGGT
GAAATGACAGGCAACAGGTTTTACTACCCGTATGAAGTTAGAGTCGCCTG
TAACTCCGGATACGTACTTGTCGGAAGCTCCTCCTTGACATGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000111 | genome | Sc0000111:122138..124677 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96312_cuf1 |
| Biotype | protein_coding |
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