|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96292_cuf10 >transcript:BL96292_cuf10-protein ID=transcript:BL96292_cuf10-protein|Name=transcript:BL96292_cuf10|organism=Branchiostoma lanceolatum|type=polypeptide|length=204bp
DGLSNPNDIYVSMATPTDVTNACSTSNGGCQHLCLAKSGGTTCACRSSWE
LQEDGTSCIPPRIVSPSYLWLDYDPVDTVTSVKMTAGNGSVIRESHGQSL
PFPVVTLFTSAAPSRIEAIDYDFQRNVIFWADTGLREIHTVELQDGRIQS
FSTLLEGISSGVEGMAVDWLNQNLYYTDSFFNWIALVNYKDKPPRHHVIV
HKGV Run BLAST on NCBI mRNA from alignment at Sc0000036:764240..770501+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96292_cuf10 ID=transcript:BL96292_cuf10|Name=transcript:BL96292_cuf10|organism=Branchiostoma lanceolatum|type=mRNA|length=6262bp|location=Sequence derived from alignment at Sc0000036:764240..770501+ (Branchiostoma lanceolatum)
GACGGCCTGTCAAATCCTAACGACATCTACGTATCAATGGCAACACCTAC
TGACGTCACCAATGGTAATGACATGCATGACGTGCCGTTTGAAATATTTC
CAATCTGTACACTAAGCAGCTAATTGTATCCAAAAAGGTTGTTTCCAGGA
TACAATTTTATGGAGTATGGGGATTGGGTGCCATGATTATACAATATGAT
GCATTGGGATCTTTAGAAGTATAAAACTTTTTTTTTTTTGTAGCGTGCTC
CACGTCCAATGGAGGTTGTCAACATCTGTGCCTCGCTAAATCAGGAGGAA
CGACGTGCGCCTGCCGGTCATCTTGGGAACTGCAGGAAGATGGAACATCC
TGCATTCCACCAAGTATGTCAGACTTTACACACAGAATGAATCTCCTATA
TAGTGATTATAGCTCACATAGTCTATGTCCTACTAAGCCAAGATAGCCTT
ATTTTGTGACATCTAGCAGCGTTGTGAATGAGTTTGTCTTGTGCTTTCGT
TTCACAAAACAAGTCTCATTTATGAATATCATTTAGCATGCTTAAACATC
TAATTTCTTACAGTGATCAAGCTCAACTTAGTCCATACTTGTCATGTGCG
TGCCAGTGATAATAAATACTGTAAATAACAGTGAGCAGATTATTATTGGA
ATCAGCAGAGCACTTTGGACTAGTGCTTCTGACCGTTTACAGCTTAAAGG
TATATATCCAATATTTTGATACACAACGGATACACAACGGATCATAATGA
CCCCCAGCGGGGGTCTTCCCGCTTCGTTGAAAATGAAAAAAAATCTCAAG
ATTTGGTCTGAAAGTCTGAAGATTTTGTGACGAATCTTGAGATATTATGA
GACAATCTTGAGATTTTATGAGACAATCTTGAGATTTTCTGAGACAATCT
TGAGATTTTATGATACAATCCTGAGATCTTTGAAAAGGTCTTAAGACTTC
TCCAGGATAGTTTCAAAGATCTCAAGATTGTCTCATAAAATCTCAAGATT
GTCTCATAAAATCTCAAGATTCATCACAAAATCTTGAGATTTTCATAATA
AATCCTGAGTTGTTTTTTTTCATTTTCGACGAAGCGTGAAGACCCCCGCT
GGGAGTCATTATGATCCGTTGTGTATCAGAGAAGTGTTTCACAAAATATT
GGATATGTACCTTTAAGCTATGAACAGTCAGAAGCATTAGTCTAAAGTGC
TCTGCTCATTCCAATAATAATCTACTCACTGTTAAATGTGTTCAAGTTCG
CATGGTTTTAATTTCGCGGTATGGAGGAAACGGAGTGTTTGTAGTAGTTT
TAAGTTCGCATTTGAGAAAAATAGTAGACAGGGGATAGGAGGGCAAAGAA
TTTCGTGACGGTTTTAAGTTCGCGGCGAAGAACTTATCGCGAATACCGCA
TACATAAAACCACCGTGACAATTTCTGCATTTACTGTAATCAATCCCTTT
GTCGGAGATGACATATTCACAACCAACCAACCAGCTCAATTCTACTGGAA
TAATCACTTGTGCTCTTTAGATTTAGCTCCTGTGTACTGTTTTCGTTTAA
CATGCAACGTGCCTAGTCATATGATATACGTAATTCACTAGACTCCATGC
TATTGTCGCATTTACCAGGATTTATCTCAATGGACTAAAATATCAAATTT
AAGTACATAATGACATGTGACAACCCCTGCATAGTATACATTGAAAAATA
TATTAAAGAATGTCTAGACGTTACAGAAACTCCTCTATTGTAAAATCCCA
TTGTCATCCCATACTACTATACCATATTCTATTAGATAGATTGGTTAGCC
TGATAGAACTTTATCTATATACCAGTGGATGACATACTTTGTAAGGCTTG
TAGAATTGTCGTGCAATAAAGTTATTGTTATCATTATTATTATTAATATC
ATCATCATCAACGTCATCGTCATCATCATCATCATCATCATCATCATTAT
TATTATTATCATTATTATTTATCGTCTGTTTTCTAGGGATTGTATCTCCG
AGCTACCTGTGGTTGGATTACGATCCCGTTGACACTGTGACGTCAGTAAA
AATGACTGCCGGAAACGGAAGTGTCATCCGAGAGTCACACGGCCAAAGCC
TTCCTTTCCCCGTCGTGACGCTCTTCACATCTGCGGCACCCTCCCGAATA
GAGGCGATCGACTACGACTTCCAGCGTAATGTCATCTTCTGGGCAGACAC
AGGTCTGAGGGAAATACACACGGTACGGTATTTGCACGCGAGTTAGTCAG
ACCAAGTATATAATGCCTTTGGTCAGACAACGCATTAGATATACTGAACA
AAAAGACTCTTTTTTTTTACACAACTAAGAGATCTATTCGACCGACGTTT
CGGTGACCATCTGTCACCTTCTTCAAGGAAATTCTGACTTGTTCATATTG
CAATGCAGCACAGGTGTCGCTTCTTATAGATGCGTTCCCAAACGCAAAGT
ATTTACAGATATACGGTCACAGTGAATGACATCACAATGCGGTCCAAAAC
TTCATTCGCTGTGACTGTATATATGTTTATTCAAATTCACAGATTGCGTA
CAATCTGAGGGGCGCCGGCAACAGGAATCTAGTTCCTCTACGAGGCCGAC
TCCCCCAGAAAATTTACAAAGTTGAGATAAAAAACAATAAATGAAAGACA
TCAAATACTAAAAGAAATACATTAAAAAAAAATGAGAGTAATAAGGTCAA
ATGATAAGGAAAACAGGGTAAACGGTTAAGCTATGTCACTATGCAAGATG
AGCAACGACAAGTGGTCGTCCAAGTACATAAGTTATCAACAGAAAATGTG
TCACTTAATCGGGATCTATAATATGAAATCAAGAGTTTTTTAACGGACTG
TAGAGTGAGGTTTGAGTACATATGTTGGCGAATGTCTAGTGGTAAATTGT
TCCAGATGACGGCAATACGACTAAAGTAAGAGAATGAGAATGATTCAGTT
TTACATGGCCGTGGTACAAGTTGGAATTGGTCTGTAGAGCGAAGTGATCT
AGTAGGTCTGGATACATTGAGGACATGAGAAATGTTGGTACAGTACACGT
TGCGGAAACATTTGAAAAGAAATAAGATATCAAAAAGTTCTCGTCTGTAA
CACAATGGTAGAAGGTTGGTATGGGTTAATCTGTCCTTATAGTTAAGTTC
GTAATCATTACAGATGTACTTGGTAGCACGTCTTTGAACACCTTCTACTT
TGCGCTGATACAATCTTGTATGCGGTGCCCATACCTGAGAACAGTAGTCT
AAATGTGGTATCACCAGTGATCGATACAAATTGAGTTTAACAGTAAATGG
GGCATTAAAGCCTACTGATCTCTTGATCATTGCAAGTCTTGAGTTACATG
TTGATATCTTCTTAAGTACATGAGAATTCCAGGATAAGTTATGTTGTACA
TGAACTCCTAATTCATTATAACTATCTTGTCGACTGAGTACAGAATCTGA
CATGCTATAAGGGTATTCAACAGGTGAAGTTTTACGTGNATAAAAAACAA
TAAATGAAAGACATCAAATACTAAAAGAAATACATTAAAAAAAAATGAGA
GTAATAAGGTCAAATGATAAGGAAAACAGGGTAAACGGTTAAGCTATGTC
ACTATGCAAGATGAGCAACGACAAGTGGTCGTCCAAGTACATAAGTTATC
AACAGAAAATGTGTCACTTAATCGGGATCTATAATATGAAATCAAGAGTT
TTTTAACGGACTGTAGAGTGAGGTTTGAGTACATATGTTGGCGAATGTCT
AGTGGTAAATTGTTCCAGATGACGGCAATACGACTAAAGTAAGAGAATGA
GAATGATTCAGTTTTACATGGCCGTGGTACAAGTTGGAATTGGTCTGTAG
AGCGAAGTGATCTAGTAGGTCTGGATACATTGAGGACATGAGAAATGTTG
GTACAGTACACGTTGCGGAAACATTTGAAAAGAAATAAGATATCAAAAAG
TTCTCGTCTGTAACACAATGGTAGAAGGTTGGTATGGGTTAATCTGTCCT
TATAGTTAAGTTCGTAATCATTACAGATGTACTTGGTAGCACGTCTTTGA
ACACCTTCTACTTTGCGCTGATACAATCTTGTATGCGGTGCCCATACCTG
AGAACAGTAGTCTAAATGTGGTATCACCAGTGATCGATACAAATTGAGTT
TAACAGTAAATGGGGCATTAAAGCCTACTGATCTCTTGATCATTGCAAGT
CTTGAGTTACATGTTGATATCTTCTTAAGTACATGAGAATTCCAGGATAA
GTTATGTTGTACATGAACTCCTAAGTCATTATAACTATCTTGTCGACTGA
GTACAGAATCTGACATGCTATAAGGGTATTCAACAGGTGAAGTTTTACGT
GTCATACTAACAACTGAACACTTAGATGGATGAAATACCATCTCCCAGGT
TTTCCCCCAGGCCACAAGACGATCTAAGTCGGACTGAAATTTAAAACAAT
CAAAAATCGAAGTAATTCTTCTAAAACATTTAGCGTCATCTGCAAACATG
GCCATTTTACCAAATTCAACACAGTCAGGTAAATCATTAACGAATAATAA
AAACAAGAATGGCCCTAATATGGATCCCTGGGGGACACCTGACAACACAG
GTAAGTAATCAGACATTTCGCCTTCTATGACAGTTCTTTGAAAACGTTCT
GAAAGATAGTCGTTAAATAAAGCAAGTAGTTGTCTGGAGAACCCAAAAGA
TTTCAATTTGTGTACTAGGAGTTTATGAGAGACACTATCAAAAGCTTTGC
AAAAATCCAAGAATATTACGTCAACTTGCCCAGATTTATCCAGTACTTCA
CCTATTTCCTCGTAAACTTCTAAAAGTTGGGTGGTAGTGGATTTACCCTT
GACGAAACCATGTTGAAGGGGATAAAGAGTGTTTGACAATAATGGATAAA
GAGAGTTGAAAATACATCTTTCGAAAACTTTGCTTGTGATACATAATAAC
GACACAGGTCTGTAATTAGATACGGCACTCTTATCACCCTTCTTAAAAAC
AGGAGTAATATTAGCTTTTTTCCACATACTCGGAATTTTTGCATTGCTCA
CACATAATTGAAACAGTTTTTCCAAAGATGGTGCTAATTGAGCTGCACAC
TTATTTAATACCATCGCTGGGAGATCGTCCGGCCCTGTGGCCTTTGTAAC
TTCCAGGTTTTTGAGAATAGATTCAATGGTGCTGACAGAAAATGTAACTG
AAGAGATTTTTGGCACACTAGAAGTATCAATCAAGTCGGGCAACGGGGTT
TCCCCATCGGTACAGTTAAAAACAGAGTAAAAGAAGTTATTGAACAATTC
TGCCTTCTCCTGAGCAGACTCAGCAGACTCATCCTGAAGTTTCATTCTGT
CTGGTAGATTTTTAGACTTTGTCTTAGAGTGGAAGAAGGACCAAAATCTT
TTAGGGTTACTCAGTACGATGTCTCCCAGATTAATCAAATGATTTGCATA
TTTAGCATTTAACATTTTCTTCAATTTGTTGTGTAAAGACTTTGCGTTTG
GGAACGCATCTACAAGCAGCGAGATATACTGTAGACCTCATACTATCTTG
ACACTAGAAATATTTTGTTCAGGAAGAAATATTTTCATGTTGTCTTCCAC
TACACTCCTGTTACCTCCGAATCTAGTTTTTAAAAGCAATGGCAATACCG
GTAGCATCTGAAAAAACGCTCCCACGTATTTTATTTGAAAGGAAAGTACC
GAGTTTAAAATCCCTCTCTTCTATACTCTCTCCAGATCTATTCCTAGAGA
AGAAAGATTCTTAATCTCCCTTGGTTGTCCATCTGCACTATAAATGTGTA
CACCCGATTAACTGGTCCCATATCCGTGTACGTATGCGCGGCGACAGGAT
TTGGGAGTAATAAATTAATGTAAAAGGTAAAGGTCTTGTAAACCGCCATT
GTCTGGATTTGCATAACAATTTCCAAACGTGTTTGATTTATGTCTCGAGG
ACCTTCACCTTTGACATATTACCCACAATTCCTGTCACCGCGCATGCGTA
CTCGGACGTGTGAACGAGCTAATTACTTGTTCACTGACCCGTTTTATAAT
TTTATGTTGGATTTGCAGGTAGAACTGCAAGATGGCAGGATACAGTCATT
CTCCACTCTTCTTGAGGGCATCTCGTCCGGAGTGGAAGGCATGGCGGTCG
ACTGGCTGAACCAGAACCTGTATTACACAGACAGCTTCTTCAACTGGATC
GCGCTTGTCAACTACAAAGACAAGCCGCCACGACATCACGTGATTGTTCA
CAAAGGAGTGGA Coding sequence (CDS) from alignment at Sc0000036:764240..770501+ >transcript:BL96292_cuf10 ID=transcript:BL96292_cuf10|Name=transcript:BL96292_cuf10|organism=Branchiostoma lanceolatum|type=CDS|length=2448bp|location=Sequence derived from alignment at Sc0000036:764240..770501+ (Branchiostoma lanceolatum)
GACGGCCTGTCAAATCCTAACGACATCTACGTATCAATGGCAACACCTAC
TGACGTCACCAATGCGTGCTCCACGTCCAATGGAGGTTGTCAACATCTGT
GCCTCGCTAAATCAGGAGGAACGACGTGCGCCTGCCGGTCATCTTGGGAA
CTGCAGGAAGATGGAACATCCTGCATTCCACCAAGGATTGTATCTCCGAG
CTACCTGTGGTTGGATTACGATCCCGTTGACACTGTGACGTCAGTAAAAA
TGACTGCCGGAAACGGAAGTGTCATCCGAGAGTCACACGGCCAAAGCCTT
CCTTTCCCCGTCGTGACGCTCTTCACATCTGCGGCACCCTCCCGAATAGA
GGCGATCGACTACGACTTCCAGCGTAATGTCATCTTCTGGGCAGACACAG
GTCTGAGGGAAATACACACGGTAGAACTGCAAGATGGCAGGATACAGTCA
TTCTCCACTCTTCTTGAGGGCATCTCGTCCGGAGTGGAAGGCATGGCGGT
CGACTGGCTGAACCAGAACCTGTATTACACAGACAGCTTCTTCAACTGGA
TCGCGCTTGTCAACTACAAAGACAAGCCGCCACGACATCACGTGATTGTT
CACAAAGGAGTGGACGGCCTGTCAAATCCTAACGACATCTACGTATCAAT
GGCAACACCTACTGACGTCACCAATGCGTGCTCCACGTCCAATGGAGGTT
GTCAACATCTGTGCCTCGCTAAATCAGGAGGAACGACGTGCGCCTGCCGG
TCATCTTGGGAACTGCAGGAAGATGGAACATCCTGCATTCCACCAAGGAT
TGTATCTCCGAGCTACCTGTGGTTGGATTACGATCCCGTTGACACTGTGA
CGTCAGTAAAAATGACTGCCGGAAACGGAAGTGTCATCCGAGAGTCACAC
GGCCAAAGCCTTCCTTTCCCCGTCGTGACGCTCTTCACATCTGCGGCACC
CTCCCGAATAGAGGCGATCGACTACGACTTCCAGCGTAATGTCATCTTCT
GGGCAGACACAGGTCTGAGGGAAATACACACGGTAGAACTGCAAGATGGC
AGGATACAGTCATTCTCCACTCTTCTTGAGGGCATCTCGTCCGGAGTGGA
AGGCATGGCGGTCGACTGGCTGAACCAGAACCTGTATTACACAGACAGCT
TCTTCAACTGGATCGCGCTTGTCAACTACAAAGACAAGCCGCCACGACAT
CACGTGATTGTTCACAAAGGAGTGGACGGCCTGTCAAATCCTAACGACAT
CTACGTATCAATGGCAACACCTACTGACGTCACCAATGCGTGCTCCACGT
CCAATGGAGGTTGTCAACATCTGTGCCTCGCTAAATCAGGAGGAACGACG
TGCGCCTGCCGGTCATCTTGGGAACTGCAGGAAGATGGAACATCCTGCAT
TCCACCAAGGATTGTATCTCCGAGCTACCTGTGGTTGGATTACGATCCCG
TTGACACTGTGACGTCAGTAAAAATGACTGCCGGAAACGGAAGTGTCATC
CGAGAGTCACACGGCCAAAGCCTTCCTTTCCCCGTCGTGACGCTCTTCAC
ATCTGCGGCACCCTCCCGAATAGAGGCGATCGACTACGACTTCCAGCGTA
ATGTCATCTTCTGGGCAGACACAGGTCTGAGGGAAATACACACGGTAGAA
CTGCAAGATGGCAGGATACAGTCATTCTCCACTCTTCTTGAGGGCATCTC
GTCCGGAGTGGAAGGCATGGCGGTCGACTGGCTGAACCAGAACCTGTATT
ACACAGACAGCTTCTTCAACTGGATCGCGCTTGTCAACTACAAAGACAAG
CCGCCACGACATCACGTGATTGTTCACAAAGGAGTGGACGGCCTGTCAAA
TCCTAACGACATCTACGTATCAATGGCAACACCTACTGACGTCACCAATG
CGTGCTCCACGTCCAATGGAGGTTGTCAACATCTGTGCCTCGCTAAATCA
GGAGGAACGACGTGCGCCTGCCGGTCATCTTGGGAACTGCAGGAAGATGG
AACATCCTGCATTCCACCAAGGATTGTATCTCCGAGCTACCTGTGGTTGG
ATTACGATCCCGTTGACACTGTGACGTCAGTAAAAATGACTGCCGGAAAC
GGAAGTGTCATCCGAGAGTCACACGGCCAAAGCCTTCCTTTCCCCGTCGT
GACGCTCTTCACATCTGCGGCACCCTCCCGAATAGAGGCGATCGACTACG
ACTTCCAGCGTAATGTCATCTTCTGGGCAGACACAGGTCTGAGGGAAATA
CACACGGTAGAACTGCAAGATGGCAGGATACAGTCATTCTCCACTCTTCT
TGAGGGCATCTCGTCCGGAGTGGAAGGCATGGCGGTCGACTGGCTGAACC
AGAACCTGTATTACACAGACAGCTTCTTCAACTGGATCGCGCTTGTCAAC
TACAAAGACAAGCCGCCACGACATCACGTGATTGTTCACAAAGGAGTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000036 | genome | Sc0000036:764240..770501 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96292_cuf10 |
| Biotype | protein_coding |
|
