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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96289_cuf1 >transcript:BL96289_cuf1-protein ID=transcript:BL96289_cuf1-protein|Name=transcript:BL96289_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=250bp
DGTTCQLKDVPTPMSDFLLVADSQLDAIFQVNITSGAKVSLPLGHLVYPV
ALDYDPATDYVYWADVLHRRISRAHRNGSSGVEDVATDDIISPWGLALDL
VGRNIYWTNDRTNSERDVISVAKLDGMYAKDLISERLDHPHGLVLDPQDG
YMYWTDWGSQPKIERAAMDGMDRTTLVNTPLQYPTGLAIDFTERRLYWCD
AGKFTIESSDLSGGDWSIFKQRTVHTSFSDIAVDGAYVYWSASNFPTIFR Run BLAST on NCBI mRNA from alignment at Sc0000036:900473..903755+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96289_cuf1 ID=transcript:BL96289_cuf1|Name=transcript:BL96289_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=3283bp|location=Sequence derived from alignment at Sc0000036:900473..903755+ (Branchiostoma lanceolatum)
GACGGGACCACCTGTCAGCTCAAAGGTACGCCCTTGTCCTTCACTTTTCA
AATGATAACGAAGAGTCCGAAGACCAAAAATCTACATGATTTTTTTTTTA
AATATGATGTGTTTTATTTGCCCTACTTATTTGTTGTTGCTGCTGGTTGT
TTTGTTTTATGTGCCAGGGGGTATCCACATAATAGAAATAAGTACACAGG
ATTGGTAGTGTACCCATTTGTTGTTTGCCCACCAGCTGTGGGAACCTGGG
GATACTTGACCTAGATAAGAGACCAACAGATGCGACTTCAAAGCACATAC
CTACAATGGAGGAGTAGATATCCCTCATTACTTATGCAAATTCAGTGCCA
ATTTGCATAATTAGCACCTCAGTTTGTACATCTCTGTCCAGCCCAACTTC
GTACCAAATAACATGAAAATCTGTCGTTCCTTTCTTCAGTTAATCTCCTC
GGAACATTTTTTACAAATACACCACTGAAGTTTCAGTGACACATACCAGG
GGGCCAAAAATAGACCTTGACCTTCCTCCTCCCAGCACCTACCCACATAC
CAAATCATTACAATCCATCCACACGTTCTTCAGTTATGCTGATTTTAAGC
GTCCGGTGACACAAACATACACACAGGATAACACACACGCCAACGCAGGC
AAAACAATATCCCCATGAAAAAAGTATTTTTTACGGTATTTTTTAAGGTT
TAAACAAACAAACTACTAGAATAATATCAAGCGTAAAAAAATCAAGGTAA
GTAATACAAACGATAGCGTTTTTTCCCTACATGTCTAGAAAATGAAAGAG
TATTATGGCAGGAGCTGCATACTTGCAATTCTATCTAGTATGAGAAATGT
AAAATGAGAGTCCTGCGCTCGAGGAGGTGCCTAGAGGTCCTACAGCAACA
GCCTCGTTACTCAGGTGGGTACCTACTGGCTGAAAAAATGTAACAATGTC
AATAATTGGCCACCAGTCAATGATGTTCCTTGTATTTGAATTTTTTTGCA
GATGTGCCCACACCAATGTCAGATTTCCTCTTGGTTGCCGACAGCCAGCT
AGACGCCATCTTTCAAGTCAACATCACTTCCGGAGCAAAGGTCAGCCTTC
CCCTGGGACACCTGGTATATCCGGTTGCCCTTGACTACGACCCTGCTACC
GATTACGTCTACTGGGCCGACGTTTTACACAGGAGGATATCGCGGGCACA
TCGGAACGGATCCAGCGGAGTAGAAGACGTTGCAACCGATGATATCATAT
GTAAGTTGGCGCAATTGTATAACGCACCAAAATGATTTATCGTTATACTT
AAAATAACAATAATGCTTGGTCATGACTTTTGTCCTACTCACTAAGACTT
TGGGACCTCAAATCAACTTTGTATCCAAACGTTTGGAAGTCTGGCAGAGA
ACACAACAGATTTTACCAGTATAATGGAAATGTGAATTTGATCATTTCTA
ATAAGATATCTATGGCGATATTGCCGCAACCAAGCGATTTGACAGAGCGC
TCAACGAATTTCATAGAGAAAAAAACACAAATATTTTAGTGCTTTGTGTG
TTTTCTTGTCTTTCAGTCAAACTAGTAAATTTTGCATGCTATTAAAGTCA
AGGGAGGCACAAGTAGGATTTATGAAGCAACAAAGTCCAATGAGATAACA
CACAATATCTGTGTAAATTCGTTTTTTTTTTTCTTTCAGCACCTTGGGGT
TTGGCTCTGGATTTGGTCGGAAGGAACATTTATTGGACCAATGATAGGAC
TAACTCAGAGCGTGACGTCATCTCAGTCGCAAAGCTTGATGGGATGTATG
CTAAAGATCTTATTTCAGAGCGGCTCGACCATCCACATGGCCTTGTGCTG
GACCCACAGGATGGGTAGGTACTCAGCGTTTCTGGATTAAGATTTAAAAC
AAAATGAAATAAAAAGACTTAATTTTCAGACGCACACTTTATTCATTGTG
AAGTACACTTTAGCGGTTATATCAAACTAAACTGCGAAACGCTGGCGGCC
TCGCTACGACCTAAATTGGATTTGTGTTTGCCTGGCACTGGACTACGCAC
GCTACCTCGGTTGCAGCGAGGTCCCCAATGTGCCTCGGATCCATTGAAAT
ACCCGCTCAACAAGTTGTCAAAACGATGGCAGAAGCAAACAGCAGATACA
AACAACATTATCATCATAGACATTGCCAATTCTAGTCCTAAAGCTTCCGT
TTTTATGTCTACCTGACTTGAACACTTGATTTCTATGAATAAAAGGAACA
CTTAGTAAATATGCTAAACTTTAAACTTTGATTATCTACTGTTACACGTG
TATACACTTAAATACAAAGCAAACAAGGATGGCTGTTGGCTAACTGTCGC
GTACTTGTTTTCACATTGACAGGTATATGTATTGGACTGACTGGGGCTCC
CAACCAAAGATTGAGCGGGCCGCTATGGACGGAATGGACAGGACAACGCT
GGTCAACACGCCACTTCAATATCCCACCGGACTGGCAATTGATTTCACTG
GTAAATACAACGCATTGTGTTTATACAATCATGCAGTAATCTACTCAACT
GCAAGTAAATTCTCTTCTGAAATAATCTGTGATAATTTATTAAGTATGAA
AGTATCAAAAACGCCGCAAGTTTCTATAAATTGGGCAGCTCCAAGCCGTC
GTTTAAAACACCTTTCCTATTAACACACATAAGAGGTGAAGTAACCCAAT
AGGCTTTTTTTTGGCCGTAGGCGCAATGGGTTGTCATCCACTGTGCACGT
GTCTAGAACAAAATATTGGAACGCGGAGCCCATCCCTCTCATTCCCCCTC
TCGCTGGACCGACGGAACGGCCGATCGAATTGACAAAGCACTCCACGAAT
TTCATCGACAAAAATGAATCTTACAAGCTTTGTATCTTTTGTTGTCAATT
TGGTCATTTATTTTTCATGATATTCCCATTATAAGGTCAAGGGTAACACA
AATCCAGTTTAGGACGCAGCGATGCCGCCAGCGTGCCGCGGGTCCAGTGA
CAGCGGGGCATTACTTCCTCAGCCGAAGTCAGGAACACATTCATTTTTAC
ACCTTGGCGGAGTGAAGAAAATCAAGCTATTTGTTGATAAACATTGTTCT
CCTTATCCAGAGCGACGTCTTTATTGGTGTGACGCGGGTAAATTTACGAT
CGAGAGCTCAGACCTATCTGGTGGAGACTGGAGCATCTTCAAACAACGCA
CTGTACACACATCTTTCTCCGACATCGCTGTGGACGGGGCTTACGTGTAC
TGGTCGGCTTCGAACTTCCCAACCATCTTCAGG Coding sequence (CDS) from alignment at Sc0000036:900473..903755+ >transcript:BL96289_cuf1 ID=transcript:BL96289_cuf1|Name=transcript:BL96289_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=3750bp|location=Sequence derived from alignment at Sc0000036:900473..903755+ (Branchiostoma lanceolatum)
GACGGGACCACCTGTCAGCTCAAAGATGTGCCCACACCAATGTCAGATTT
CCTCTTGGTTGCCGACAGCCAGCTAGACGCCATCTTTCAAGTCAACATCA
CTTCCGGAGCAAAGGTCAGCCTTCCCCTGGGACACCTGGTATATCCGGTT
GCCCTTGACTACGACCCTGCTACCGATTACGTCTACTGGGCCGACGTTTT
ACACAGGAGGATATCGCGGGCACATCGGAACGGATCCAGCGGAGTAGAAG
ACGTTGCAACCGATGATATCATATCACCTTGGGGTTTGGCTCTGGATTTG
GTCGGAAGGAACATTTATTGGACCAATGATAGGACTAACTCAGAGCGTGA
CGTCATCTCAGTCGCAAAGCTTGATGGGATGTATGCTAAAGATCTTATTT
CAGAGCGGCTCGACCATCCACATGGCCTTGTGCTGGACCCACAGGATGGG
TATATGTATTGGACTGACTGGGGCTCCCAACCAAAGATTGAGCGGGCCGC
TATGGACGGAATGGACAGGACAACGCTGGTCAACACGCCACTTCAATATC
CCACCGGACTGGCAATTGATTTCACTGAGCGACGTCTTTATTGGTGTGAC
GCGGGTAAATTTACGATCGAGAGCTCAGACCTATCTGGTGGAGACTGGAG
CATCTTCAAACAACGCACTGTACACACATCTTTCTCCGACATCGCTGTGG
ACGGGGCTTACGTGTACTGGTCGGCTTCGAACTTCCCAACCATCTTCAGG
GACGGGACCACCTGTCAGCTCAAAGATGTGCCCACACCAATGTCAGATTT
CCTCTTGGTTGCCGACAGCCAGCTAGACGCCATCTTTCAAGTCAACATCA
CTTCCGGAGCAAAGGTCAGCCTTCCCCTGGGACACCTGGTATATCCGGTT
GCCCTTGACTACGACCCTGCTACCGATTACGTCTACTGGGCCGACGTTTT
ACACAGGAGGATATCGCGGGCACATCGGAACGGATCCAGCGGAGTAGAAG
ACGTTGCAACCGATGATATCATATCACCTTGGGGTTTGGCTCTGGATTTG
GTCGGAAGGAACATTTATTGGACCAATGATAGGACTAACTCAGAGCGTGA
CGTCATCTCAGTCGCAAAGCTTGATGGGATGTATGCTAAAGATCTTATTT
CAGAGCGGCTCGACCATCCACATGGCCTTGTGCTGGACCCACAGGATGGG
TATATGTATTGGACTGACTGGGGCTCCCAACCAAAGATTGAGCGGGCCGC
TATGGACGGAATGGACAGGACAACGCTGGTCAACACGCCACTTCAATATC
CCACCGGACTGGCAATTGATTTCACTGAGCGACGTCTTTATTGGTGTGAC
GCGGGTAAATTTACGATCGAGAGCTCAGACCTATCTGGTGGAGACTGGAG
CATCTTCAAACAACGCACTGTACACACATCTTTCTCCGACATCGCTGTGG
ACGGGGCTTACGTGTACTGGTCGGCTTCGAACTTCCCAACCATCTTCAGG
GACGGGACCACCTGTCAGCTCAAAGATGTGCCCACACCAATGTCAGATTT
CCTCTTGGTTGCCGACAGCCAGCTAGACGCCATCTTTCAAGTCAACATCA
CTTCCGGAGCAAAGGTCAGCCTTCCCCTGGGACACCTGGTATATCCGGTT
GCCCTTGACTACGACCCTGCTACCGATTACGTCTACTGGGCCGACGTTTT
ACACAGGAGGATATCGCGGGCACATCGGAACGGATCCAGCGGAGTAGAAG
ACGTTGCAACCGATGATATCATATCACCTTGGGGTTTGGCTCTGGATTTG
GTCGGAAGGAACATTTATTGGACCAATGATAGGACTAACTCAGAGCGTGA
CGTCATCTCAGTCGCAAAGCTTGATGGGATGTATGCTAAAGATCTTATTT
CAGAGCGGCTCGACCATCCACATGGCCTTGTGCTGGACCCACAGGATGGG
TATATGTATTGGACTGACTGGGGCTCCCAACCAAAGATTGAGCGGGCCGC
TATGGACGGAATGGACAGGACAACGCTGGTCAACACGCCACTTCAATATC
CCACCGGACTGGCAATTGATTTCACTGAGCGACGTCTTTATTGGTGTGAC
GCGGGTAAATTTACGATCGAGAGCTCAGACCTATCTGGTGGAGACTGGAG
CATCTTCAAACAACGCACTGTACACACATCTTTCTCCGACATCGCTGTGG
ACGGGGCTTACGTGTACTGGTCGGCTTCGAACTTCCCAACCATCTTCAGG
GACGGGACCACCTGTCAGCTCAAAGATGTGCCCACACCAATGTCAGATTT
CCTCTTGGTTGCCGACAGCCAGCTAGACGCCATCTTTCAAGTCAACATCA
CTTCCGGAGCAAAGGTCAGCCTTCCCCTGGGACACCTGGTATATCCGGTT
GCCCTTGACTACGACCCTGCTACCGATTACGTCTACTGGGCCGACGTTTT
ACACAGGAGGATATCGCGGGCACATCGGAACGGATCCAGCGGAGTAGAAG
ACGTTGCAACCGATGATATCATATCACCTTGGGGTTTGGCTCTGGATTTG
GTCGGAAGGAACATTTATTGGACCAATGATAGGACTAACTCAGAGCGTGA
CGTCATCTCAGTCGCAAAGCTTGATGGGATGTATGCTAAAGATCTTATTT
CAGAGCGGCTCGACCATCCACATGGCCTTGTGCTGGACCCACAGGATGGG
TATATGTATTGGACTGACTGGGGCTCCCAACCAAAGATTGAGCGGGCCGC
TATGGACGGAATGGACAGGACAACGCTGGTCAACACGCCACTTCAATATC
CCACCGGACTGGCAATTGATTTCACTGAGCGACGTCTTTATTGGTGTGAC
GCGGGTAAATTTACGATCGAGAGCTCAGACCTATCTGGTGGAGACTGGAG
CATCTTCAAACAACGCACTGTACACACATCTTTCTCCGACATCGCTGTGG
ACGGGGCTTACGTGTACTGGTCGGCTTCGAACTTCCCAACCATCTTCAGG
GACGGGACCACCTGTCAGCTCAAAGATGTGCCCACACCAATGTCAGATTT
CCTCTTGGTTGCCGACAGCCAGCTAGACGCCATCTTTCAAGTCAACATCA
CTTCCGGAGCAAAGGTCAGCCTTCCCCTGGGACACCTGGTATATCCGGTT
GCCCTTGACTACGACCCTGCTACCGATTACGTCTACTGGGCCGACGTTTT
ACACAGGAGGATATCGCGGGCACATCGGAACGGATCCAGCGGAGTAGAAG
ACGTTGCAACCGATGATATCATATCACCTTGGGGTTTGGCTCTGGATTTG
GTCGGAAGGAACATTTATTGGACCAATGATAGGACTAACTCAGAGCGTGA
CGTCATCTCAGTCGCAAAGCTTGATGGGATGTATGCTAAAGATCTTATTT
CAGAGCGGCTCGACCATCCACATGGCCTTGTGCTGGACCCACAGGATGGG
TATATGTATTGGACTGACTGGGGCTCCCAACCAAAGATTGAGCGGGCCGC
TATGGACGGAATGGACAGGACAACGCTGGTCAACACGCCACTTCAATATC
CCACCGGACTGGCAATTGATTTCACTGAGCGACGTCTTTATTGGTGTGAC
GCGGGTAAATTTACGATCGAGAGCTCAGACCTATCTGGTGGAGACTGGAG
CATCTTCAAACAACGCACTGTACACACATCTTTCTCCGACATCGCTGTGG
ACGGGGCTTACGTGTACTGGTCGGCTTCGAACTTCCCAACCATCTTCAGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000036 | genome | Sc0000036:900473..903755 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96289_cuf1 |
| Biotype | protein_coding |
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