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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96171_evm0 >transcript:BL96171_evm0-protein ID=transcript:BL96171_evm0-protein|Name=transcript:BL96171_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=105bp
MKVSVDINDKKVEVVANLEKSLLQILADPTGDKGEQQGVPAMKRVWNPRD
RCVCHWEGTAPFCSEEVGCSVGDFEKKADRCGNGSCCWWGRKILCCPSYH
PTYCG Run BLAST on NCBI mRNA from alignment at xpSc0039683:112061..114537+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96171_evm0 ID=transcript:BL96171_evm0|Name=transcript:BL96171_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2477bp|location=Sequence derived from alignment at xpSc0039683:112061..114537+ (Branchiostoma lanceolatum)
ATGAAAGTTTGTTTGTAACTGAAGAAATGAGCAGGTAAAATTCGGCAGCC
GCCCGCGAGGTCGGACGTCCACAGCCCGGCATTGTCGGTGATCCGGTCGT
GCGCGTTCAGGGAGGTGTAGCTAGGTACATGTTGTAATTGCCATGAAAAG
GAATTGCATGCCAACTGGTTATTGGCAATTTGTTCACATGATCTAGGGTA
AATGTGCTCAATAGAAAATTAATGACTTGGTGCATTTCCTATAGCTTCAA
TACGAACGCGCGCTTGTAAAACACGTTTTATGACAGGCAAGCTATGTGGC
GGAAAAATCGTAACTCACGATGGGTGTTCCAATGCATTAAACTTGTCACA
CATTGTCTATATCCTGTTTTAGCTGTCGACATTAACGACAAGAAGGTAGA
AGTGGTGGCCAACCTGGAGAAGAGTCTTCTCCAGATACTGGCAGGTAAGT
AGCTTAGAACGTTCATGTGGCCTAGGGTTTTTGGCACCGTCTTGCGTGGA
TTGCGACTGTTACATGCAACCCATGCTGGATTTCAAGACAATGTTGTATC
AAAGTAACACCCGTTGCGTACGATATCGTAAAAGACTGGTCTGTTGGCAA
ACTCTTGCAAATGCTATTTACTCTTATGTATGTAAGTTCTGTCATTATCA
CCTAATTAACTTTTAAATGGCACACATTACTACCGATATCTAGTTAAATG
TATATAACTGCGTATTCTACGTGTTCTGGTAAGGTTCCGGTTCGGAATTG
TTTTGACGGAATGGCTAAAGAGTGCGTGAAGATAAGACGTAAATCCTAGG
TTTTCTTGTTAGTTTTGGCTTCAGATTTTTCGGCTATCGCTATAGCAGTA
TGTAATCTTTTATGTGTCCTGAAAGACCCAATCTTCTTAGCGTTTTGCGC
TTTCGGAGTTTTGGTCGTCCGCGAAGACTTCCTGGTATTAGTGCGCGATG
ACGGTAACGCGGCCTTGTCACCTGATTACCCGAATCGTACGTTCTATGTG
CGTTTTGCATGATTTCGCACCATCGGGGATTGCGGAAAACGTATCCTCAC
GATTTTTTTTTCATTATTCCTAATTGCACGGACAGAAAAATGACCTTTAT
TCCCATATTAGTCATTATCTTAGGAAAACCTTTATTTTCCTTTCAGCGGA
CTTAGAAGAATGCCCTAAAATAGCAGTTTTGGGGGATGAAGATTACTTTC
AATATGACGGTTTTCACAGAAAATGGCGTTTTCACAGAGATTATCAAATT
CGTCTGTCGTTCGAAGGAAAGGCACCCCCATCCATCGGAAACATTAAATT
GCCCGAAAAAGGATGTTTGGAAAAGCGCTCTTGCCTTCCTGGGAACAGGT
CACGCCCTGAATTGTAAAAAAAGCAACAACTCCGAACCGAGACACTAAGA
TGCAAATATATTCTGGTTCCTGCGTAATTTCTGTTGTTGTTTCCGCAAAT
ACATTATCTGTGATTTTTATTAACGTGCTCGCCACATGCATTTCCTTCGT
ATAGATCCAACTGGCGACAAGGGCGAACAGCAAGGTGTTCCTGCGATGAA
ACGTGTGTGGAACCCGCGTGACCGTTGTGGTAATATCATCTTTTTTATTA
TTATTATTTATTTGTTTTACTTGCTATTCGAAAAGAAGTAAAAGAAAACC
TTCTTAAGTTGCAAGTTGTTATTGAATCAACTAGACTGAGCTTTCATTGT
CTTTATCAATCGCAATGTCTGCTTGTTTCATTTCCTCTGGTCGTCTTTCA
TTTTATCCCTTCTTTATATAAACCTTTTTGGTGTTATAATGTGCGTGATG
CCTTTCCTTTATAGTTTGCCACTGGGAAGGCACAGCTCCGTTCTGCTCTG
AGGAAGTGGGCTGTTCCGTAGGTGATTTTGAGAAAAAGGCGGACAGGTGC
GGGAACGGATCATGCTGCTGGTGGGGAAGGAAAATATTGTGCTGTCCCAG
TTACCATCCCAGTGAGTAAGCACTTCGATACGGTGTTATTAACAGCAGCG
CATAAGGATAATTTCTTGTCTAATTCAACTGCACTACCTTTGTCTTGTCG
GCAGGACACGCCCTTTGAAAGGACCTTAGGTTAGTTATGCACTTCTGGCT
GTGCGTCATGAACAGCCAGACAAATAAATGAACTAAAAAAACATCATCTG
TAAGCAAATACATCATATTTCACTCCATATCTATGCTGTTATAGTCTGTT
TCAACATCTAATTATGAAAATAGCCAACCCCGTGCAAACATAGAATCTTC
CCGTGACACTTAAATCAGCCATTTGGAAAGAAATGGCTGTATTTGTAAAA
TAGGCGAAGCATTAGAAAGCAACAGAATGATAAATAGCATAATTTCTAAA
CAGTGTGTTAATCATGTGATCGCATATCTATGTTCAGGTTAACATAAAGC
GTAATTGTGAGATGACTCACTGTGTATGTTGGAACCTGACGACTGTTTCT
TTTCTGTTTACAGCCTATTGCGGATAA Coding sequence (CDS) from alignment at xpSc0039683:112061..114537+ >transcript:BL96171_evm0 ID=transcript:BL96171_evm0|Name=transcript:BL96171_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1590bp|location=Sequence derived from alignment at xpSc0039683:112061..114537+ (Branchiostoma lanceolatum)
ATGAAAGTTTCTGTCGACATTAACGACAAGAAGGTAGAAGTGGTGGCCAA
CCTGGAGAAGAGTCTTCTCCAGATACTGGCAGATCCAACTGGCGACAAGG
GCGAACAGCAAGGTGTTCCTGCGATGAAACGTGTGTGGAACCCGCGTGAC
CGTTGTGTTTGCCACTGGGAAGGCACAGCTCCGTTCTGCTCTGAGGAAGT
GGGCTGTTCCGTAGGTGATTTTGAGAAAAAGGCGGACAGGTGCGGGAACG
GATCATGCTGCTGGTGGGGAAGGAAAATATTGTGCTGTCCCAGTTACCAT
CCCACCTATTGCGGATAAATGAAAGTTTCTGTCGACATTAACGACAAGAA
GGTAGAAGTGGTGGCCAACCTGGAGAAGAGTCTTCTCCAGATACTGGCAG
ATCCAACTGGCGACAAGGGCGAACAGCAAGGTGTTCCTGCGATGAAACGT
GTGTGGAACCCGCGTGACCGTTGTGTTTGCCACTGGGAAGGCACAGCTCC
GTTCTGCTCTGAGGAAGTGGGCTGTTCCGTAGGTGATTTTGAGAAAAAGG
CGGACAGGTGCGGGAACGGATCATGCTGCTGGTGGGGAAGGAAAATATTG
TGCTGTCCCAGTTACCATCCCACCTATTGCGGATAAATGAAAGTTTCTGT
CGACATTAACGACAAGAAGGTAGAAGTGGTGGCCAACCTGGAGAAGAGTC
TTCTCCAGATACTGGCAGATCCAACTGGCGACAAGGGCGAACAGCAAGGT
GTTCCTGCGATGAAACGTGTGTGGAACCCGCGTGACCGTTGTGTTTGCCA
CTGGGAAGGCACAGCTCCGTTCTGCTCTGAGGAAGTGGGCTGTTCCGTAG
GTGATTTTGAGAAAAAGGCGGACAGGTGCGGGAACGGATCATGCTGCTGG
TGGGGAAGGAAAATATTGTGCTGTCCCAGTTACCATCCCACCTATTGCGG
ATAAATGAAAGTTTCTGTCGACATTAACGACAAGAAGGTAGAAGTGGTGG
CCAACCTGGAGAAGAGTCTTCTCCAGATACTGGCAGATCCAACTGGCGAC
AAGGGCGAACAGCAAGGTGTTCCTGCGATGAAACGTGTGTGGAACCCGCG
TGACCGTTGTGTTTGCCACTGGGAAGGCACAGCTCCGTTCTGCTCTGAGG
AAGTGGGCTGTTCCGTAGGTGATTTTGAGAAAAAGGCGGACAGGTGCGGG
AACGGATCATGCTGCTGGTGGGGAAGGAAAATATTGTGCTGTCCCAGTTA
CCATCCCACCTATTGCGGATAAATGAAAGTTTCTGTCGACATTAACGACA
AGAAGGTAGAAGTGGTGGCCAACCTGGAGAAGAGTCTTCTCCAGATACTG
GCAGATCCAACTGGCGACAAGGGCGAACAGCAAGGTGTTCCTGCGATGAA
ACGTGTGTGGAACCCGCGTGACCGTTGTGTTTGCCACTGGGAAGGCACAG
CTCCGTTCTGCTCTGAGGAAGTGGGCTGTTCCGTAGGTGATTTTGAGAAA
AAGGCGGACAGGTGCGGGAACGGATCATGCTGCTGGTGGGGAAGGAAAAT
ATTGTGCTGTCCCAGTTACCATCCCACCTATTGCGGATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039683 | genome | xpSc0039683:112061..114537 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96171_evm0 |
| Biotype | protein_coding |
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