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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96160_evm0 >transcript:BL96160_evm0-protein ID=transcript:BL96160_evm0-protein|Name=transcript:BL96160_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=317bp
MVKRLSRGQLHASSGSVTNLDIGLGENGSACYYRLLQQPGEEVQEIPELS
TSPTLASVCMDRYIVCLVDAVSSPLDLFRSELDMFSFSLLSLLDAWMSQL
EELRVQLAGWFDEVTGYTTRCPARFQLDVSILLHVGLTGCQLTYQGPNQD
DQLKEDTEKFITACSLKSLLSTTPDNKPAPPSDQPLIEVDNSVVHSSSQE
QNAVVLSLEGEEYKFNCETVSKFCKNWGEKVLSAGSVSAFQVRQMLDNFK
LQVIQDMNSFKRLILQAETDHYALYRCLVFTQNCGHNLLESPAVLNDPGL
ASLDSQDVLKVLQDYLK Run BLAST on NCBI mRNA from alignment at xfSc0000374:4..1948+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96160_evm0 ID=transcript:BL96160_evm0|Name=transcript:BL96160_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=1945bp|location=Sequence derived from alignment at xfSc0000374:4..1948+ (Branchiostoma lanceolatum)
ATGGTGAAGCGACTCAGCCGGGGTCAGCTGCACGCCAGCAGCGGGAGTGT
CACAAACCTGGACATCGGGCTGGGGGAAAATGGGTCAGCCTGTTACTACA
GACTGCTGCAGCAGCCAGGGGAGGAGGTACAGGTGAGAGAGTATCTCAGA
GATCAGAGTTTAAAGATTAAAAACAGGGGTAACGTTATTGATGGGTAAGA
GGCAGGGAGCAGTAAAGCATTGTTATTGTCCCCCTGCAACAGCCAGGGAA
GACGAGAAAATTTTGTATAGAGTTCATTCGGTCAAAGATCAGGGGCAGAG
GTCACTTGTGTATGAGTAGGGGTTAGTGAAGGGTCAGAGGTTATAATCAG
GGGTTACCAATTGTCTCCTAAAGAAGCCAATTTCATTGGGTAGAGGCCAG
TTTGATGTTAGTGATGCATATAAAGAGCCTACTAGTATATGATATATTAC
ATCTCTTCACCTTTCTGTATTTCTTGATCGTTTATGCACTGGTTTATCAT
GTGCATTGTGTTATTAACATTATGCTGCAGGAGATACCAGAGCTGAGTAC
ATCCCCCACCCTGGCCAGTGTGTGCATGGACCGGTACATCGTGTGTCTAG
TGGACGCCGTCTCATCACCCCTTGACCTCTTCAGATCAGAACTGGACATG
TTCAGCTTCAGGTGCTACGATTCTTATATTAATTTCTGAAATGAAAAATA
ATTTTGTCTCACATCTTCTCACATCTGCAAAGACGTTGTCTAGCTTTTTG
GGTCCAGAAGGTTATCTACTTTGCATAACAATGGAAAGTAGATTCCTACC
AGTACAGTAGCTGGCTTCATTGGTCCGTCAAAAGGTTTCCCCTTCATGAC
AGAACTTGTCCATGGTTTGTCTTACTTTGCTGCAGTCTCCTGAGCCTGCT
GGATGCCTGGATGTCGCAGCTGGAGGAGCTGCGTGTGCAGCTGGCCGGGT
GGTTTGACGAGGTGACCGGCTACACCACCAGGTGCCCCGCCAGGTTCCAG
CTGGACGTGTCCATCCTGCTGCATGTCGGGCTGACAGGTGGGTGTGGGGA
GGATTAACTTGTTTCATAATCTTTCATTGAGTGGTAAGTGAAGGCCTCTA
CCAGGCTAAATGTATAACTGTTGTGGTGTACCCACGATGAAGGTCTTCAC
TAGTGGTTGCATCAATGTATATGAGCAAGGGGATGGGATGAAAAAGCCTA
TTCAAGACACAGATTGGAGAGTGACTTGTCATTATTTTGGGAAAATATCG
CTATGATGTGTATATTTGTATGTACATAGGTGTATTTCATTGATACGTAT
AAAGGGGCAATTCTTTGCAAGGCTTGTTGTATAAATTTCCATGTCGTGTA
TCTACCTTTCTGTTTCTTTCAGCTTCACTCTCTTAATTACTTATTCTATC
TTCCAGGCTGCCAGCTTACCTACCAAGGACCAAATCAAGATGACCAGCTG
AAAGAAGACACTGAGAAGTTTATCACTGCGTGCAGTCTTAAAAGTCTCCT
TAGCACCACGCCCGACAACAAACCTGCCCCACCTAGCGACCAACCCCTGA
TTGAGGTTGACAACAGCGTTGTCCATTCCAGTAGCCAGGAGCAAAATGCT
GTTGTGTTGTCTTTAGAAGGAGAGGAATACAAGTTTAACTGTGAGACTGT
CAGCAAGTTTTGTAAGAACTGGGGAGAGAAGGTTCTGAGTGCCGGCAGTG
TGAGCGCATTCCAGGTCAGACAGATGTTGGACAACTTCAAACTGCAGGTG
ATTCAGGACATGAACTCCTTCAAGCGCCTGATTCTTCAGGCAGAGACGGA
CCACTACGCACTCTACCGTTGCCTTGTCTTTACCCAGAACTGCGGACACA
ACTTGTTAGAATCACCAGCGGTCTTGAATGATCCTGGTCTTGCCAGTCTT
GACTCTCAAGATGTGCTCAAAGTGTTACAAGATTACCTGAAGTAA Coding sequence (CDS) from alignment at xfSc0000374:4..1948+ >transcript:BL96160_evm0 ID=transcript:BL96160_evm0|Name=transcript:BL96160_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=3816bp|location=Sequence derived from alignment at xfSc0000374:4..1948+ (Branchiostoma lanceolatum)
ATGGTGAAGCGACTCAGCCGGGGTCAGCTGCACGCCAGCAGCGGGAGTGT
CACAAACCTGGACATCGGGCTGGGGGAAAATGGGTCAGCCTGTTACTACA
GACTGCTGCAGCAGCCAGGGGAGGAGGTACAGGAGATACCAGAGCTGAGT
ACATCCCCCACCCTGGCCAGTGTGTGCATGGACCGGTACATCGTGTGTCT
AGTGGACGCCGTCTCATCACCCCTTGACCTCTTCAGATCAGAACTGGACA
TGTTCAGCTTCAGTCTCCTGAGCCTGCTGGATGCCTGGATGTCGCAGCTG
GAGGAGCTGCGTGTGCAGCTGGCCGGGTGGTTTGACGAGGTGACCGGCTA
CACCACCAGGTGCCCCGCCAGGTTCCAGCTGGACGTGTCCATCCTGCTGC
ATGTCGGGCTGACAGGCTGCCAGCTTACCTACCAAGGACCAAATCAAGAT
GACCAGCTGAAAGAAGACACTGAGAAGTTTATCACTGCGTGCAGTCTTAA
AAGTCTCCTTAGCACCACGCCCGACAACAAACCTGCCCCACCTAGCGACC
AACCCCTGATTGAGGTTGACAACAGCGTTGTCCATTCCAGTAGCCAGGAG
CAAAATGCTGTTGTGTTGTCTTTAGAAGGAGAGGAATACAAGTTTAACTG
TGAGACTGTCAGCAAGTTTTGTAAGAACTGGGGAGAGAAGGTTCTGAGTG
CCGGCAGTGTGAGCGCATTCCAGGTCAGACAGATGTTGGACAACTTCAAA
CTGCAGGTGATTCAGGACATGAACTCCTTCAAGCGCCTGATTCTTCAGGC
AGAGACGGACCACTACGCACTCTACCGTTGCCTTGTCTTTACCCAGAACT
GCGGACACAACTTGTTAGAATCACCAGCGGTCTTGAATGATCCTGGTCTT
GCCAGTCTTGACTCTCAAGATGTGCTCAAAGTGTTACAAGATTACCTGAA
GTAAATGGTGAAGCGACTCAGCCGGGGTCAGCTGCACGCCAGCAGCGGGA
GTGTCACAAACCTGGACATCGGGCTGGGGGAAAATGGGTCAGCCTGTTAC
TACAGACTGCTGCAGCAGCCAGGGGAGGAGGTACAGGAGATACCAGAGCT
GAGTACATCCCCCACCCTGGCCAGTGTGTGCATGGACCGGTACATCGTGT
GTCTAGTGGACGCCGTCTCATCACCCCTTGACCTCTTCAGATCAGAACTG
GACATGTTCAGCTTCAGTCTCCTGAGCCTGCTGGATGCCTGGATGTCGCA
GCTGGAGGAGCTGCGTGTGCAGCTGGCCGGGTGGTTTGACGAGGTGACCG
GCTACACCACCAGGTGCCCCGCCAGGTTCCAGCTGGACGTGTCCATCCTG
CTGCATGTCGGGCTGACAGGCTGCCAGCTTACCTACCAAGGACCAAATCA
AGATGACCAGCTGAAAGAAGACACTGAGAAGTTTATCACTGCGTGCAGTC
TTAAAAGTCTCCTTAGCACCACGCCCGACAACAAACCTGCCCCACCTAGC
GACCAACCCCTGATTGAGGTTGACAACAGCGTTGTCCATTCCAGTAGCCA
GGAGCAAAATGCTGTTGTGTTGTCTTTAGAAGGAGAGGAATACAAGTTTA
ACTGTGAGACTGTCAGCAAGTTTTGTAAGAACTGGGGAGAGAAGGTTCTG
AGTGCCGGCAGTGTGAGCGCATTCCAGGTCAGACAGATGTTGGACAACTT
CAAACTGCAGGTGATTCAGGACATGAACTCCTTCAAGCGCCTGATTCTTC
AGGCAGAGACGGACCACTACGCACTCTACCGTTGCCTTGTCTTTACCCAG
AACTGCGGACACAACTTGTTAGAATCACCAGCGGTCTTGAATGATCCTGG
TCTTGCCAGTCTTGACTCTCAAGATGTGCTCAAAGTGTTACAAGATTACC
TGAAGTAAATGGTGAAGCGACTCAGCCGGGGTCAGCTGCACGCCAGCAGC
GGGAGTGTCACAAACCTGGACATCGGGCTGGGGGAAAATGGGTCAGCCTG
TTACTACAGACTGCTGCAGCAGCCAGGGGAGGAGGTACAGGAGATACCAG
AGCTGAGTACATCCCCCACCCTGGCCAGTGTGTGCATGGACCGGTACATC
GTGTGTCTAGTGGACGCCGTCTCATCACCCCTTGACCTCTTCAGATCAGA
ACTGGACATGTTCAGCTTCAGTCTCCTGAGCCTGCTGGATGCCTGGATGT
CGCAGCTGGAGGAGCTGCGTGTGCAGCTGGCCGGGTGGTTTGACGAGGTG
ACCGGCTACACCACCAGGTGCCCCGCCAGGTTCCAGCTGGACGTGTCCAT
CCTGCTGCATGTCGGGCTGACAGGCTGCCAGCTTACCTACCAAGGACCAA
ATCAAGATGACCAGCTGAAAGAAGACACTGAGAAGTTTATCACTGCGTGC
AGTCTTAAAAGTCTCCTTAGCACCACGCCCGACAACAAACCTGCCCCACC
TAGCGACCAACCCCTGATTGAGGTTGACAACAGCGTTGTCCATTCCAGTA
GCCAGGAGCAAAATGCTGTTGTGTTGTCTTTAGAAGGAGAGGAATACAAG
TTTAACTGTGAGACTGTCAGCAAGTTTTGTAAGAACTGGGGAGAGAAGGT
TCTGAGTGCCGGCAGTGTGAGCGCATTCCAGGTCAGACAGATGTTGGACA
ACTTCAAACTGCAGGTGATTCAGGACATGAACTCCTTCAAGCGCCTGATT
CTTCAGGCAGAGACGGACCACTACGCACTCTACCGTTGCCTTGTCTTTAC
CCAGAACTGCGGACACAACTTGTTAGAATCACCAGCGGTCTTGAATGATC
CTGGTCTTGCCAGTCTTGACTCTCAAGATGTGCTCAAAGTGTTACAAGAT
TACCTGAAGTAAATGGTGAAGCGACTCAGCCGGGGTCAGCTGCACGCCAG
CAGCGGGAGTGTCACAAACCTGGACATCGGGCTGGGGGAAAATGGGTCAG
CCTGTTACTACAGACTGCTGCAGCAGCCAGGGGAGGAGGTACAGGAGATA
CCAGAGCTGAGTACATCCCCCACCCTGGCCAGTGTGTGCATGGACCGGTA
CATCGTGTGTCTAGTGGACGCCGTCTCATCACCCCTTGACCTCTTCAGAT
CAGAACTGGACATGTTCAGCTTCAGTCTCCTGAGCCTGCTGGATGCCTGG
ATGTCGCAGCTGGAGGAGCTGCGTGTGCAGCTGGCCGGGTGGTTTGACGA
GGTGACCGGCTACACCACCAGGTGCCCCGCCAGGTTCCAGCTGGACGTGT
CCATCCTGCTGCATGTCGGGCTGACAGGCTGCCAGCTTACCTACCAAGGA
CCAAATCAAGATGACCAGCTGAAAGAAGACACTGAGAAGTTTATCACTGC
GTGCAGTCTTAAAAGTCTCCTTAGCACCACGCCCGACAACAAACCTGCCC
CACCTAGCGACCAACCCCTGATTGAGGTTGACAACAGCGTTGTCCATTCC
AGTAGCCAGGAGCAAAATGCTGTTGTGTTGTCTTTAGAAGGAGAGGAATA
CAAGTTTAACTGTGAGACTGTCAGCAAGTTTTGTAAGAACTGGGGAGAGA
AGGTTCTGAGTGCCGGCAGTGTGAGCGCATTCCAGGTCAGACAGATGTTG
GACAACTTCAAACTGCAGGTGATTCAGGACATGAACTCCTTCAAGCGCCT
GATTCTTCAGGCAGAGACGGACCACTACGCACTCTACCGTTGCCTTGTCT
TTACCCAGAACTGCGGACACAACTTGTTAGAATCACCAGCGGTCTTGAAT
GATCCTGGTCTTGCCAGTCTTGACTCTCAAGATGTGCTCAAAGTGTTACA
AGATTACCTGAAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000374 | genome | xfSc0000374:4..1948 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96160_evm0 |
| Biotype | protein_coding |
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