|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96155_evm1 >transcript:BL96155_evm1-protein ID=transcript:BL96155_evm1-protein|Name=transcript:BL96155_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=221bp
MSRVAVVTGSNKGIGLEIVRGLCKQFDGIVYLTARNEKLGQEAVQKLKSE
GLNPSFHQLDITNEQSIQALKQHLQDKHGGLDVLVNNAGFAYSGADKTPF
GIQAVDSLGINFFGTMAISKALLPIIRPHGRVVNVSSRIGTMSLKKCSAK
LQARFRDRGIQEEELVTLMNKFIETAKNGKHVENGFSDSAYGMSKVGMTV
LTFIQAREMEKDPREDILVNC Run BLAST on NCBI mRNA from alignment at Sc0000986:65..2872- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96155_evm1 ID=transcript:BL96155_evm1|Name=transcript:BL96155_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2808bp|location=Sequence derived from alignment at Sc0000986:65..2872- (Branchiostoma lanceolatum)
ATGAGTCGTGTAGCTGTGGTGAGTGTGGTTTGTGTCGTAGTATATGTTGT
CACCAAAATGATTTTCCCAGTAGCCAAAATGCTAGCCTACGTTGCAGATC
TAACATAAGACCCCGCCGGGCGTGTTTTATTCAAAAACTACGGGTAATAT
GCTGATAGCTACCGGGTCCTGAAGTCTTGTCGAGGTATGATGGCTGCACG
AGTGGGCAGCGATCGGACCTTGGCGAACATTCAGAACTCGGCAACTATCG
CGACAGTGCGTGTAGTGCGTGCAGGTAACGAGTTGTGTGTCGGCACGTCA
ACGTAAAAACCTGACCCACGAACTGACAGTAATAGTCAGTAACTACTACA
ATAAGCCAATATACATTCATGCCATGGTTAATTGGAGGAATCACCCCCTT
TATGCCATGCAGAGGGACAAGTTTCAGAGTGGTTCTCTGTAGGTTGAATA
TGTGAAGATATACATACGCTGTATCATCTAACTGTGGGGCCTTTGAGCCT
TTCTTTGTGTGGCAGAAAAATTGTTGCAAAGCTACCGCTAACATGGCTAA
TGCAGTGATTATCACTTCCGCATTTCCAGGTGACCGGGTCCAACAAGGGG
ATCGGGCTGGAGATCGTGCGAGGACTGTGCAAACAATTCGACGGCATTGT
TTATCTTACAGGTAAATAAGCATCGCATTGGTCATATCATTAACTCCGAC
GTACCGTGCATTTCGTCTGTAATCAAAAGATAGAAGCTATTGTAACTTTG
TATCTGTGCAAGTGGGAAGTTCTTTTGCTTTTAAACATCCATTTAATATA
TATGTAGTTGGTTACTCTTGCTCATGAATGTCAATAAGCGATATTTTTGT
ACTGTCTTTTAGGATCTTCCTCAGGGTCAGGGTTATGTAATGGGTTAAGG
AGGTGTTATTCACAACTTTTCGAAGGCTGTAAGGTATGCTTTTGTTGGTT
CCTAACAAATCTATTGCTGTCAATATTGCAAGAAGAATTATAATTGACAG
GAATATTGCCAATAGCCTTCTTAAATTGCATCATCGCATCTTCACCTTTG
TTACTTTGCAATGCCAGCTTTTTTTCTTCAAAATCATTTGATCCAACACA
GCCAGAAATGAGAAACTCGGACAGGAGGCTGTCCAAAAGCTGAAGTCTGA
GGGCCTGAACCCCAGCTTCCACCAGCTGGACATCACAAATGAGCAGAGTA
TTCAGGCACTGAAGCAGCATCTACAGGACAAGCACGGGGGCCTGGATGTG
CTGGTTAACAATGCGGGATTCGCTTACTCGGTATAGATTCCAAACGAAAT
TTTTCCCTTTCAGTACTAGAACCTGGTAATGCTTCGGTCCCAATTAGAAA
AAGGGTAGTTCACGGACTGTTTTTTTAGCACTTTCGGGCAGTTGCAGGGC
TATTTTTGGGCCGGGCCGGGATCCCGAATCAATTTAACTCAGACTTAAAT
TGAACGTGGGACCCGGTAACAAATAGACGCGGAGAGCTAATCGTGCGAGC
ACCGGAAGTTACCCCCCGGTACACGGCATCCCACCGGGACAAAATGGTGG
CTTCGGGGCCCGGCCGGGACTACACCCCCGACGGGCACCGGCGCAATTGG
GACCGAAGCATAAATAGACAGCCTTTCTTACTGGTGCAATCCCGGCAGAT
TCCGCCTGATGACGCAATCCTAAATCAATGGTATCGTTTCGTTTCACGTG
TAGGGTGCAGATAAGACTCCATTTGGGATCCAAGCAGTAGACTCACTGGG
CATCAACTTCTTCGGAACCATGGCTATCAGCAAAGCTCTGCTGCCGATCA
TCCGGCCTCACGGAAGGTGTGTTATCAGCTATCATGACAGTTGCTATACA
AGATTCAGATGAACTGCACGGTTATGCAAATTCCACATTGAAGAGAAATG
CAAAAAGCGGTATTTCAACGTAGACAACTGGATTCGCTGGCACGAAAACA
ACACGTAATCTGAGGACCTTTAAATACATTGCATCAATACCCCGATTCAT
ATCATAACATATCACCATGTACTTACGAATTTTACTTCAAATCCTATCCT
CCAGGGTAGTGAATGTATCCAGCCGTATCGGTACCATGTCTCTAAAAAAA
TGCAGTGCCAAACTTCAGGCCCGCTTCAGGGACAGGGGCATCCAGGAGGA
AGAACTTGTGACGTTGATGAATAAGTTCATCGAGTAAGTATGGGTCAAAG
TGTGCATGACAGAATCACGAGAGTGGAACTATGATTCGCTCTACGATATG
TCCAAAACATTGAGAAAAAAAATGTATGTATTTATTCATATACCGCCCTT
CGGAAAGGGAAGCAAATTTTAGGTGTCACAGCGGAATCTTATGTCTACAT
GTAACATATGCTAACATAATTCCATCAGGGTACATAATTCCGCCAACCTG
AAAAGATACGTCGAAACAGATCTCCAACCCAAAGTAACGTCCCCCAGTGT
AATGCACTGCAAATTTAAACTGTGTATACCTGGGGTGTGGGGTTTGTGTG
CTGCACTAGAGATCAGAGATCTCTCAAACACACTGTTTTTCAAAGTGGCG
GATTTATGTAACCCGGCGAATTAATGTTAATGGCAACTAAAACTAGTACA
ACTAGTAAATCTTCTTAGCAACAAAATCACTCTTTATCCTTGTTAAATAC
TGCATTCTTGCGACAGGACGGCAAAGAATGGGAAGCACGTGGAGAATGGT
TTCTCCGACTCTGCGTACGGCATGTCTAAGGTTGGAATGACTGTGCTGAC
GTTTATCCAGGCTAGGGAGATGGAGAAGGATCCCAGAGAGGACATTCTGG
TCAACTGT Coding sequence (CDS) from alignment at Sc0000986:65..2872- >transcript:BL96155_evm1 ID=transcript:BL96155_evm1|Name=transcript:BL96155_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3978bp|location=Sequence derived from alignment at Sc0000986:65..2872- (Branchiostoma lanceolatum)
ATGAGTCGTGTAGCTGTGGTGACCGGGTCCAACAAGGGGATCGGGCTGGA
GATCGTGCGAGGACTGTGCAAACAATTCGACGGCATTGTTTATCTTACAG
CCAGAAATGAGAAACTCGGACAGGAGGCTGTCCAAAAGCTGAAGTCTGAG
GGCCTGAACCCCAGCTTCCACCAGCTGGACATCACAAATGAGCAGAGTAT
TCAGGCACTGAAGCAGCATCTACAGGACAAGCACGGGGGCCTGGATGTGC
TGGTTAACAATGCGGGATTCGCTTACTCGGGTGCAGATAAGACTCCATTT
GGGATCCAAGCAGTAGACTCACTGGGCATCAACTTCTTCGGAACCATGGC
TATCAGCAAAGCTCTGCTGCCGATCATCCGGCCTCACGGAAGGGTAGTGA
ATGTATCCAGCCGTATCGGTACCATGTCTCTAAAAAAATGCAGTGCCAAA
CTTCAGGCCCGCTTCAGGGACAGGGGCATCCAGGAGGAAGAACTTGTGAC
GTTGATGAATAAGTTCATCGAGACGGCAAAGAATGGGAAGCACGTGGAGA
ATGGTTTCTCCGACTCTGCGTACGGCATGTCTAAGGTTGGAATGACTGTG
CTGACGTTTATCCAGGCTAGGGAGATGGAGAAGGATCCCAGAGAGGACAT
TCTGGTCAACTGTATGAGTCGTGTAGCTGTGGTGACCGGGTCCAACAAGG
GGATCGGGCTGGAGATCGTGCGAGGACTGTGCAAACAATTCGACGGCATT
GTTTATCTTACAGCCAGAAATGAGAAACTCGGACAGGAGGCTGTCCAAAA
GCTGAAGTCTGAGGGCCTGAACCCCAGCTTCCACCAGCTGGACATCACAA
ATGAGCAGAGTATTCAGGCACTGAAGCAGCATCTACAGGACAAGCACGGG
GGCCTGGATGTGCTGGTTAACAATGCGGGATTCGCTTACTCGGGTGCAGA
TAAGACTCCATTTGGGATCCAAGCAGTAGACTCACTGGGCATCAACTTCT
TCGGAACCATGGCTATCAGCAAAGCTCTGCTGCCGATCATCCGGCCTCAC
GGAAGGGTAGTGAATGTATCCAGCCGTATCGGTACCATGTCTCTAAAAAA
ATGCAGTGCCAAACTTCAGGCCCGCTTCAGGGACAGGGGCATCCAGGAGG
AAGAACTTGTGACGTTGATGAATAAGTTCATCGAGACGGCAAAGAATGGG
AAGCACGTGGAGAATGGTTTCTCCGACTCTGCGTACGGCATGTCTAAGGT
TGGAATGACTGTGCTGACGTTTATCCAGGCTAGGGAGATGGAGAAGGATC
CCAGAGAGGACATTCTGGTCAACTGTATGAGTCGTGTAGCTGTGGTGACC
GGGTCCAACAAGGGGATCGGGCTGGAGATCGTGCGAGGACTGTGCAAACA
ATTCGACGGCATTGTTTATCTTACAGCCAGAAATGAGAAACTCGGACAGG
AGGCTGTCCAAAAGCTGAAGTCTGAGGGCCTGAACCCCAGCTTCCACCAG
CTGGACATCACAAATGAGCAGAGTATTCAGGCACTGAAGCAGCATCTACA
GGACAAGCACGGGGGCCTGGATGTGCTGGTTAACAATGCGGGATTCGCTT
ACTCGGGTGCAGATAAGACTCCATTTGGGATCCAAGCAGTAGACTCACTG
GGCATCAACTTCTTCGGAACCATGGCTATCAGCAAAGCTCTGCTGCCGAT
CATCCGGCCTCACGGAAGGGTAGTGAATGTATCCAGCCGTATCGGTACCA
TGTCTCTAAAAAAATGCAGTGCCAAACTTCAGGCCCGCTTCAGGGACAGG
GGCATCCAGGAGGAAGAACTTGTGACGTTGATGAATAAGTTCATCGAGAC
GGCAAAGAATGGGAAGCACGTGGAGAATGGTTTCTCCGACTCTGCGTACG
GCATGTCTAAGGTTGGAATGACTGTGCTGACGTTTATCCAGGCTAGGGAG
ATGGAGAAGGATCCCAGAGAGGACATTCTGGTCAACTGTATGAGTCGTGT
AGCTGTGGTGACCGGGTCCAACAAGGGGATCGGGCTGGAGATCGTGCGAG
GACTGTGCAAACAATTCGACGGCATTGTTTATCTTACAGCCAGAAATGAG
AAACTCGGACAGGAGGCTGTCCAAAAGCTGAAGTCTGAGGGCCTGAACCC
CAGCTTCCACCAGCTGGACATCACAAATGAGCAGAGTATTCAGGCACTGA
AGCAGCATCTACAGGACAAGCACGGGGGCCTGGATGTGCTGGTTAACAAT
GCGGGATTCGCTTACTCGGGTGCAGATAAGACTCCATTTGGGATCCAAGC
AGTAGACTCACTGGGCATCAACTTCTTCGGAACCATGGCTATCAGCAAAG
CTCTGCTGCCGATCATCCGGCCTCACGGAAGGGTAGTGAATGTATCCAGC
CGTATCGGTACCATGTCTCTAAAAAAATGCAGTGCCAAACTTCAGGCCCG
CTTCAGGGACAGGGGCATCCAGGAGGAAGAACTTGTGACGTTGATGAATA
AGTTCATCGAGACGGCAAAGAATGGGAAGCACGTGGAGAATGGTTTCTCC
GACTCTGCGTACGGCATGTCTAAGGTTGGAATGACTGTGCTGACGTTTAT
CCAGGCTAGGGAGATGGAGAAGGATCCCAGAGAGGACATTCTGGTCAACT
GTATGAGTCGTGTAGCTGTGGTGACCGGGTCCAACAAGGGGATCGGGCTG
GAGATCGTGCGAGGACTGTGCAAACAATTCGACGGCATTGTTTATCTTAC
AGCCAGAAATGAGAAACTCGGACAGGAGGCTGTCCAAAAGCTGAAGTCTG
AGGGCCTGAACCCCAGCTTCCACCAGCTGGACATCACAAATGAGCAGAGT
ATTCAGGCACTGAAGCAGCATCTACAGGACAAGCACGGGGGCCTGGATGT
GCTGGTTAACAATGCGGGATTCGCTTACTCGGGTGCAGATAAGACTCCAT
TTGGGATCCAAGCAGTAGACTCACTGGGCATCAACTTCTTCGGAACCATG
GCTATCAGCAAAGCTCTGCTGCCGATCATCCGGCCTCACGGAAGGGTAGT
GAATGTATCCAGCCGTATCGGTACCATGTCTCTAAAAAAATGCAGTGCCA
AACTTCAGGCCCGCTTCAGGGACAGGGGCATCCAGGAGGAAGAACTTGTG
ACGTTGATGAATAAGTTCATCGAGACGGCAAAGAATGGGAAGCACGTGGA
GAATGGTTTCTCCGACTCTGCGTACGGCATGTCTAAGGTTGGAATGACTG
TGCTGACGTTTATCCAGGCTAGGGAGATGGAGAAGGATCCCAGAGAGGAC
ATTCTGGTCAACTGTATGAGTCGTGTAGCTGTGGTGACCGGGTCCAACAA
GGGGATCGGGCTGGAGATCGTGCGAGGACTGTGCAAACAATTCGACGGCA
TTGTTTATCTTACAGCCAGAAATGAGAAACTCGGACAGGAGGCTGTCCAA
AAGCTGAAGTCTGAGGGCCTGAACCCCAGCTTCCACCAGCTGGACATCAC
AAATGAGCAGAGTATTCAGGCACTGAAGCAGCATCTACAGGACAAGCACG
GGGGCCTGGATGTGCTGGTTAACAATGCGGGATTCGCTTACTCGGGTGCA
GATAAGACTCCATTTGGGATCCAAGCAGTAGACTCACTGGGCATCAACTT
CTTCGGAACCATGGCTATCAGCAAAGCTCTGCTGCCGATCATCCGGCCTC
ACGGAAGGGTAGTGAATGTATCCAGCCGTATCGGTACCATGTCTCTAAAA
AAATGCAGTGCCAAACTTCAGGCCCGCTTCAGGGACAGGGGCATCCAGGA
GGAAGAACTTGTGACGTTGATGAATAAGTTCATCGAGACGGCAAAGAATG
GGAAGCACGTGGAGAATGGTTTCTCCGACTCTGCGTACGGCATGTCTAAG
GTTGGAATGACTGTGCTGACGTTTATCCAGGCTAGGGAGATGGAGAAGGA
TCCCAGAGAGGACATTCTGGTCAACTGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000986 | genome | Sc0000986:65..2872 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96155_evm1 |
| Biotype | protein_coding |
|
