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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96147_evm1 >transcript:BL96147_evm1-protein ID=transcript:BL96147_evm1-protein|Name=transcript:BL96147_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=233bp
MESWYFCMTIVTTIGYGHMGPLTDAGKIFCCAYAFIGIPICLILLALVGG
QLGDANRWLDKRVKEALSKKIKNPGFISIVGILVSLIVMLSVFFFIPALI
FTLVEEDWTYLEALYYCFITLSTVGFGDFVAGLPSSTQSYAINAIYKFVV
FLWIMVGLTFLAGALDLMVTKLKDLGSKMSDLDVPNIDGVNVDMADLKLP
KGFKSKMGKDIKPKEVSEWGKTGTYNGGFDTPL Run BLAST on NCBI mRNA from alignment at Sc0000778:13039..15620+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96147_evm1 ID=transcript:BL96147_evm1|Name=transcript:BL96147_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2582bp|location=Sequence derived from alignment at Sc0000778:13039..15620+ (Branchiostoma lanceolatum)
ATGGAGTCGTGGTACTTCTGCATGACGATTGTCACCACCATTGGCTATGG
ACATATGGGGCCTTTAACAGATGCTGGAAAGGTATGTCTTCCAATGGCTG
TTTCAAGTTTAGGCCATTTTACTGTCTGAAAATACTGTTTGTAAGGTAGC
ATCTGCATGTGATAGTGATGTCGAACCAGTTTAGCGCACGTAAGAGCTAT
TCTTCCACTGGTCTTGATAGAGAAGACTGGCCCTCTTTTTGACAAGCACA
ATGAACAGTGGACCACAGTTTAATGTCCCACCCTTAGGACTGCAATGCTT
TCCGATAGCGTGCATGTCTGGTGACCAACACAGCCAGGAAAAAATCATGG
CTTCTACCGGTTAAGTTCCAGAGCCTGGGCTGCTAATCACTAGACAACGA
ATGCTACCATTATGATATTGTGCTGCAAATTTTGCTACCATGAAAACTGA
TCAGAAGTGTCATCATCCCTACCGTTCTACAGATCTTCTGCTGTGCCTAT
GCCTTTATCGGCATTCCCATCTGTTTGATCCTACTGGCACTTGTTGGTGG
TCAACTGGGTGATGCAAACAGGTAGACTGGTTTGGTTCTACCATTTCATT
TTTTGGAGGAAAAAAACATTGAACACAGTTTTTTTTGTAACTGTCACTGA
CAGTAGTGCATGCAAAAGGATCCGATACTATTATTTTGATAGTCATATAA
TTGTCATATTGATGACCATCTTATTTTGTTTCATGGTTACATGACACATC
TTAAGAAAAATGATTTACACTGCTTAATAACATTTGAATAGTACAAAATC
TTAATTCCAAACAATATGAAATCATAACAATTCTGAGAAGTAACAACTGC
AGTTACTGTTTCAGTGCTGTAATAAGAACATGTACAACTGATTCAGAGGT
GAATTAAGGCTGATCATGATCTAACTTATAACTTTCCTTTACAGATGGCT
GGATAAACGTGTGAAGGAAGCACTCTCCAAGAAGATCAAGAACCCAGGGT
TCATCAGCATAGTGGGGATTCTCGTCTCCCTGATCGTCATGCTGAGTGTG
TTCTTCTTCATCCCTGCTCTCATCTTCACTTTAGGTGTGTCTCAACGTTG
GGTGTCAATTTTTTCAGTGTTGTTGTGTTATATTGTGTGTATAGATATGA
CGTGTAAGATCAACGTAATTCAGGAGCACATGAATTCATATTAATTGATA
TTATGTATTTCTGCCTTTGATAGTTGATTTAAACGAATTAAGATTTGAAA
GCTTTCTTCAATTTTCACTTTGAGTCTTCTCATATCTCAAGGTTCTGCGT
ATAATATCATGATCAGGTTTGTGGTAGTCTGTGAAACGCAAACTCCGCTA
TCTGAGGCTGTAATTAATTATAGCCCCTTCCTGCAGAGCGGTGTTGAGCG
GCTGCTATAAACGCGATTCAATAGGGCTTAGGTTTGTGGCAGTATTAGCA
TTAGCTACACACCACAAATGAGTGATATTCATAACAGATAAAATATTGCT
TAGAAGGTTGATCCATATTGTGACACAGAAATCCTGTAAAGTCACTTACA
GTATAGTCTATCATTTTGTGTTTTGCAAGCTTGAAATATTAACCTTTGAA
GGAAATCATGTAAAGAGCTTGATATTTGTACTAGCAAGAATTATTCCATC
TTACGATGCTAACTATACTTTTTTTTGTCAAGGGAATAAAGATCAAAAGA
AACAGTCTCTCTCTGGAAAATGAGATACTTTATAATTTTCTTTTTTTTCC
CAGTTGAAGAAGACTGGACCTACTTAGAGGCCCTGTATTACTGCTTCATC
ACCCTGAGCACTGTGGGGTTCGGAGACTTTGTGGCCGGTCTACCTTCCAG
CACCCAGAGCTATGCTATCAACGCTATCTACAAGGTAATGTTACATTATG
TGTACACGTACAGCACACACACTGACACACACACACACATGCACGCACGC
ATGCACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACACAC
TCACTCACACACTCATACATTACTGCTTAACAAATAAAAATTACATAGTC
TTTAGGCAACTCAATAAAACTAATAAAATGTAGATTCTTAAGCCATTGAA
AAACATAAATCAAGTCAACACTTTTCACACTGTTTTCAGGATTTTTCATC
TTAGAAAACAATGTTTTGACACCTCAAGACCTTTGGTAGATATTCCTTTT
AAATGTAATCAGTGTCACCTGGCACAAGAAGTCAAGCTCCTTTTGTTAGT
TTGCTTCAACAATAATGTCAGACTGAGTGTCTTTCCATGAAGTAACTGTC
TAATTTTTTGACTCCCCATAGTTTGTTGTGTTCCTGTGGATCATGGTTGG
CTTGACCTTCCTCGCCGGCGCTCTGGATTTGATGGTGACAAAACTGAAAG
ACCTGGGATCGAAGATGTCCGACCTGGATGTGCCGAACATTGATGGGGTC
AACGTGGACATGGCAGACTTGAAGTTGCCGAAAGGCTTCAAGTCCAAGAT
GGGCAAAGACATCAAGCCCAAAGAGGTGTCAGAGTGGGGAAAGACTGGAA
CGTACAATGGAGGATTCGACACCCCGTTATGA Coding sequence (CDS) from alignment at Sc0000778:13039..15620+ >transcript:BL96147_evm1 ID=transcript:BL96147_evm1|Name=transcript:BL96147_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3510bp|location=Sequence derived from alignment at Sc0000778:13039..15620+ (Branchiostoma lanceolatum)
ATGGAGTCGTGGTACTTCTGCATGACGATTGTCACCACCATTGGCTATGG
ACATATGGGGCCTTTAACAGATGCTGGAAAGATCTTCTGCTGTGCCTATG
CCTTTATCGGCATTCCCATCTGTTTGATCCTACTGGCACTTGTTGGTGGT
CAACTGGGTGATGCAAACAGATGGCTGGATAAACGTGTGAAGGAAGCACT
CTCCAAGAAGATCAAGAACCCAGGGTTCATCAGCATAGTGGGGATTCTCG
TCTCCCTGATCGTCATGCTGAGTGTGTTCTTCTTCATCCCTGCTCTCATC
TTCACTTTAGTTGAAGAAGACTGGACCTACTTAGAGGCCCTGTATTACTG
CTTCATCACCCTGAGCACTGTGGGGTTCGGAGACTTTGTGGCCGGTCTAC
CTTCCAGCACCCAGAGCTATGCTATCAACGCTATCTACAAGTTTGTTGTG
TTCCTGTGGATCATGGTTGGCTTGACCTTCCTCGCCGGCGCTCTGGATTT
GATGGTGACAAAACTGAAAGACCTGGGATCGAAGATGTCCGACCTGGATG
TGCCGAACATTGATGGGGTCAACGTGGACATGGCAGACTTGAAGTTGCCG
AAAGGCTTCAAGTCCAAGATGGGCAAAGACATCAAGCCCAAAGAGGTGTC
AGAGTGGGGAAAGACTGGAACGTACAATGGAGGATTCGACACCCCGTTAT
GAATGGAGTCGTGGTACTTCTGCATGACGATTGTCACCACCATTGGCTAT
GGACATATGGGGCCTTTAACAGATGCTGGAAAGATCTTCTGCTGTGCCTA
TGCCTTTATCGGCATTCCCATCTGTTTGATCCTACTGGCACTTGTTGGTG
GTCAACTGGGTGATGCAAACAGATGGCTGGATAAACGTGTGAAGGAAGCA
CTCTCCAAGAAGATCAAGAACCCAGGGTTCATCAGCATAGTGGGGATTCT
CGTCTCCCTGATCGTCATGCTGAGTGTGTTCTTCTTCATCCCTGCTCTCA
TCTTCACTTTAGTTGAAGAAGACTGGACCTACTTAGAGGCCCTGTATTAC
TGCTTCATCACCCTGAGCACTGTGGGGTTCGGAGACTTTGTGGCCGGTCT
ACCTTCCAGCACCCAGAGCTATGCTATCAACGCTATCTACAAGTTTGTTG
TGTTCCTGTGGATCATGGTTGGCTTGACCTTCCTCGCCGGCGCTCTGGAT
TTGATGGTGACAAAACTGAAAGACCTGGGATCGAAGATGTCCGACCTGGA
TGTGCCGAACATTGATGGGGTCAACGTGGACATGGCAGACTTGAAGTTGC
CGAAAGGCTTCAAGTCCAAGATGGGCAAAGACATCAAGCCCAAAGAGGTG
TCAGAGTGGGGAAAGACTGGAACGTACAATGGAGGATTCGACACCCCGTT
ATGAATGGAGTCGTGGTACTTCTGCATGACGATTGTCACCACCATTGGCT
ATGGACATATGGGGCCTTTAACAGATGCTGGAAAGATCTTCTGCTGTGCC
TATGCCTTTATCGGCATTCCCATCTGTTTGATCCTACTGGCACTTGTTGG
TGGTCAACTGGGTGATGCAAACAGATGGCTGGATAAACGTGTGAAGGAAG
CACTCTCCAAGAAGATCAAGAACCCAGGGTTCATCAGCATAGTGGGGATT
CTCGTCTCCCTGATCGTCATGCTGAGTGTGTTCTTCTTCATCCCTGCTCT
CATCTTCACTTTAGTTGAAGAAGACTGGACCTACTTAGAGGCCCTGTATT
ACTGCTTCATCACCCTGAGCACTGTGGGGTTCGGAGACTTTGTGGCCGGT
CTACCTTCCAGCACCCAGAGCTATGCTATCAACGCTATCTACAAGTTTGT
TGTGTTCCTGTGGATCATGGTTGGCTTGACCTTCCTCGCCGGCGCTCTGG
ATTTGATGGTGACAAAACTGAAAGACCTGGGATCGAAGATGTCCGACCTG
GATGTGCCGAACATTGATGGGGTCAACGTGGACATGGCAGACTTGAAGTT
GCCGAAAGGCTTCAAGTCCAAGATGGGCAAAGACATCAAGCCCAAAGAGG
TGTCAGAGTGGGGAAAGACTGGAACGTACAATGGAGGATTCGACACCCCG
TTATGAATGGAGTCGTGGTACTTCTGCATGACGATTGTCACCACCATTGG
CTATGGACATATGGGGCCTTTAACAGATGCTGGAAAGATCTTCTGCTGTG
CCTATGCCTTTATCGGCATTCCCATCTGTTTGATCCTACTGGCACTTGTT
GGTGGTCAACTGGGTGATGCAAACAGATGGCTGGATAAACGTGTGAAGGA
AGCACTCTCCAAGAAGATCAAGAACCCAGGGTTCATCAGCATAGTGGGGA
TTCTCGTCTCCCTGATCGTCATGCTGAGTGTGTTCTTCTTCATCCCTGCT
CTCATCTTCACTTTAGTTGAAGAAGACTGGACCTACTTAGAGGCCCTGTA
TTACTGCTTCATCACCCTGAGCACTGTGGGGTTCGGAGACTTTGTGGCCG
GTCTACCTTCCAGCACCCAGAGCTATGCTATCAACGCTATCTACAAGTTT
GTTGTGTTCCTGTGGATCATGGTTGGCTTGACCTTCCTCGCCGGCGCTCT
GGATTTGATGGTGACAAAACTGAAAGACCTGGGATCGAAGATGTCCGACC
TGGATGTGCCGAACATTGATGGGGTCAACGTGGACATGGCAGACTTGAAG
TTGCCGAAAGGCTTCAAGTCCAAGATGGGCAAAGACATCAAGCCCAAAGA
GGTGTCAGAGTGGGGAAAGACTGGAACGTACAATGGAGGATTCGACACCC
CGTTATGAATGGAGTCGTGGTACTTCTGCATGACGATTGTCACCACCATT
GGCTATGGACATATGGGGCCTTTAACAGATGCTGGAAAGATCTTCTGCTG
TGCCTATGCCTTTATCGGCATTCCCATCTGTTTGATCCTACTGGCACTTG
TTGGTGGTCAACTGGGTGATGCAAACAGATGGCTGGATAAACGTGTGAAG
GAAGCACTCTCCAAGAAGATCAAGAACCCAGGGTTCATCAGCATAGTGGG
GATTCTCGTCTCCCTGATCGTCATGCTGAGTGTGTTCTTCTTCATCCCTG
CTCTCATCTTCACTTTAGTTGAAGAAGACTGGACCTACTTAGAGGCCCTG
TATTACTGCTTCATCACCCTGAGCACTGTGGGGTTCGGAGACTTTGTGGC
CGGTCTACCTTCCAGCACCCAGAGCTATGCTATCAACGCTATCTACAAGT
TTGTTGTGTTCCTGTGGATCATGGTTGGCTTGACCTTCCTCGCCGGCGCT
CTGGATTTGATGGTGACAAAACTGAAAGACCTGGGATCGAAGATGTCCGA
CCTGGATGTGCCGAACATTGATGGGGTCAACGTGGACATGGCAGACTTGA
AGTTGCCGAAAGGCTTCAAGTCCAAGATGGGCAAAGACATCAAGCCCAAA
GAGGTGTCAGAGTGGGGAAAGACTGGAACGTACAATGGAGGATTCGACAC
CCCGTTATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000778 | genome | Sc0000778:13039..15620 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96147_evm1 |
| Biotype | protein_coding |
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