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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96139_evm0 >transcript:BL96139_evm0-protein ID=transcript:BL96139_evm0-protein|Name=transcript:BL96139_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=230bp
MFISAMQLFAVLLWAVLGLCAGQKPCCTPDQWEGTTQELQGFLVDDKLGT
VYGTVEVSYDFTNQKLALAENLNETGSGNTKLKVIQDYKKGTQYAIQGNS
CMEFALKGSMRKQCIPDNATHIGTFSFGGMAPDGLECDAFMTTVAGMDNV
YAISDMTRDGCYPVTQVSVNLMRGHSTMTTQVFTDVTPGIKDPSIFTPPV
PPCDKVMFEDTTELGSDFLKRVRRSFEQFI Run BLAST on NCBI mRNA from alignment at Sc0000709:29535..31948+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96139_evm0 ID=transcript:BL96139_evm0|Name=transcript:BL96139_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2414bp|location=Sequence derived from alignment at Sc0000709:29535..31948+ (Branchiostoma lanceolatum)
ATGTTCATCAGCGCTATGCAGTTGTTCGCGGTCCTGTTGTGGGCCGTACT
GGGGCTGTGTGCCGGGCAGAAGCCTTGCTGCACCCCCGACCAATGGGAGG
GCACGACACAGGAGCTGCAGGGATTCCTGGTGGACGACAAGCTAGGGACC
GTGTACGGGACTGTCGAGGTAAAGATAGAAACTAAAAAGAAAGACATTTG
TAGGAAGAACACTGACGACAGGTATTTTTCATTGCACAAAGGCTAAGAAT
CCGCCAAGAACTAGGATCCATCTGAAACGTTTTAAATTTTGCTGTAATGA
CAATGTAACTTTATACAAGTGTCTCCATACTCTGAATCGATAGGTAATCC
AGTGCTGTACCTTGTCACGTTGTGGCACACCAAGGGTTCAACTTCACCAA
GACTAACCATTGCTTAACAACAGTGTACCCTTGTGTATAAGTTCATCAAA
TTAAACCATTACAGTGTCTAACCTTTAATATCACTATTGTTTCCGGGTTA
ACAGGTCTCCTACGACTTCACCAACCAGAAATTAGCACTGGCCGAGAATC
TGAACGAGACCGGGTCGGGAAATACCAAGCTCAAAGTTATACAGGATTAT
AAGAAGGTACAGAACTCCTCTTATTATTCCACCGAAAGTGTGTGCATGTC
TGTGCGATGTTTTCAAATACAGTTACCAACTTGAAGGCAGCTTTACCACT
CACCACGAGGGTTTCCTGATGTGGAATGTTCCCACAAACGTATGAAGGCT
TGGACGATTAGATTTTATGTTACGCACATATTTGGTTGTTTGGGCTATTG
GACATATACTGTATCCTCTCACAAGCTAACTACAGGTCATGGTGATAAAG
CAGAAGAACAATTGCAACGATAGATGAATACTGTATGTTATCTTTCTACA
TCTACAATTTATACATTATATGTGTAGGGTCAACTTCTTCTCTTCTTCAG
ACAGCTGTTTGATGATTGAATATGATATTTTGGCCGGGTAATTGAAGCTA
ACAGTGTTGTTATCATCCACAGGGTACACAGTACGCGATACAAGGCAACT
CTTGTATGGAGTTTGCCCTCAAAGGATCCATGAGAAAGCAATGCATCCCA
GGTGAGTTATGCTGGACAAAAATCATATGATAAATCTTCTTTGACCAGTT
GCCTACGTCACTAGTCTGGAAAAGTAACGTGCTCTGAGGGAGGTCATTCA
ACCTGGTGAAGGTTGCAGTACGGAAATGCATATCATTCATGTTTGCACGT
ATAAACTTGGCAAAGCCACAGCAGGCTTAAGACTATCGTTCACACTGAAG
TTCAGCTGTATTGGTAAACGACGTTATTATGAGCAAAAGAATGAACGCAA
TACCAACACTGGAATGACGTGGAAATTCCGCCAAAATTTTCGGCTGAACT
CTGTTAACCTTGTTCACTTAATTCACTTCTCTTACAAAGAAATCTGGCTC
CGAATCTAGGATTTCGTCTCTGTAGTCAGACTGTCATGATCTAGTGAATA
ATTCCGTGACATTTTGTTGCTTAAGGATAAAACTGTGATATTTCTGTTAC
AAAGTACAATGAACTTTTTTCTACCCATTAGACAACGCTACCCACATCGG
TACGTTCAGTTTCGGTGGGATGGCGCCGGACGGGCTGGAGTGTGACGCGT
TCATGACGACAGTAGCGGGGATGGACAACGTCTACGCCATTTCCGACATG
ACGCGGGATGGCTGCTACCCTGTCACACAGGTCTCCGTCAATCTCATGAG
AGGGCGTGAGTACCTTTAAGTTTGTCCACAATTCTGAGTCTGAATTTTAT
ACATACCATTCACCTCATGGCACAGTGCTCATTTATTTGAAGTAATAAGA
GGAACTGTGTGAGGAATTTGTCGGTGTGTGCCGTTGCGCCAAGAACATAC
CCCCGTTCTTTACAGAAAAGTGTTGAGGGTTTTGCAATATGCGGCTCGGT
GTATAAGTCTGCTTAAAACGGGTCCAACAGCTTCGTGCTTCGTCCCTTCC
TAAACACTGCGACTCTAATGCTATATGTTCAGTATGGATAGTAAGCAATG
GATGATAGAATTGCCACATGATAGTCGTTTTTTACATTCCCCTTCAGATT
CCACCATGACTACTCAGGTTTTCACCGACGTGACGCCTGGTATAAAGGAC
CCGAGTATCTTCACCCCTCCCGTACCGCCCTGCGACAAGGTCATGTTCGA
GGTAAGCATGGTTGTTTTACATTTCAAAGTCAATTTTGAAATATTTTCAT
TTCTACGACTAGCATCTTGACTTCTTTAGGAACTGACACAATCCGATATC
GACCCAGTTTTCAATGCAGCTGACTGTTTCTCTTGTCCTCCTTTAAAGGA
TACCACAGAACTGGGGTCTGACTTCCTCAAGAGAGTTCGTCGATCTTTCG
AACAGTTCATCTAG Coding sequence (CDS) from alignment at Sc0000709:29535..31948+ >transcript:BL96139_evm0 ID=transcript:BL96139_evm0|Name=transcript:BL96139_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=4158bp|location=Sequence derived from alignment at Sc0000709:29535..31948+ (Branchiostoma lanceolatum)
ATGTTCATCAGCGCTATGCAGTTGTTCGCGGTCCTGTTGTGGGCCGTACT
GGGGCTGTGTGCCGGGCAGAAGCCTTGCTGCACCCCCGACCAATGGGAGG
GCACGACACAGGAGCTGCAGGGATTCCTGGTGGACGACAAGCTAGGGACC
GTGTACGGGACTGTCGAGGTCTCCTACGACTTCACCAACCAGAAATTAGC
ACTGGCCGAGAATCTGAACGAGACCGGGTCGGGAAATACCAAGCTCAAAG
TTATACAGGATTATAAGAAGGGTACACAGTACGCGATACAAGGCAACTCT
TGTATGGAGTTTGCCCTCAAAGGATCCATGAGAAAGCAATGCATCCCAGA
CAACGCTACCCACATCGGTACGTTCAGTTTCGGTGGGATGGCGCCGGACG
GGCTGGAGTGTGACGCGTTCATGACGACAGTAGCGGGGATGGACAACGTC
TACGCCATTTCCGACATGACGCGGGATGGCTGCTACCCTGTCACACAGGT
CTCCGTCAATCTCATGAGAGGGCATTCCACCATGACTACTCAGGTTTTCA
CCGACGTGACGCCTGGTATAAAGGACCCGAGTATCTTCACCCCTCCCGTA
CCGCCCTGCGACAAGGTCATGTTCGAGGATACCACAGAACTGGGGTCTGA
CTTCCTCAAGAGAGTTCGTCGATCTTTCGAACAGTTCATCTAGATGTTCA
TCAGCGCTATGCAGTTGTTCGCGGTCCTGTTGTGGGCCGTACTGGGGCTG
TGTGCCGGGCAGAAGCCTTGCTGCACCCCCGACCAATGGGAGGGCACGAC
ACAGGAGCTGCAGGGATTCCTGGTGGACGACAAGCTAGGGACCGTGTACG
GGACTGTCGAGGTCTCCTACGACTTCACCAACCAGAAATTAGCACTGGCC
GAGAATCTGAACGAGACCGGGTCGGGAAATACCAAGCTCAAAGTTATACA
GGATTATAAGAAGGGTACACAGTACGCGATACAAGGCAACTCTTGTATGG
AGTTTGCCCTCAAAGGATCCATGAGAAAGCAATGCATCCCAGACAACGCT
ACCCACATCGGTACGTTCAGTTTCGGTGGGATGGCGCCGGACGGGCTGGA
GTGTGACGCGTTCATGACGACAGTAGCGGGGATGGACAACGTCTACGCCA
TTTCCGACATGACGCGGGATGGCTGCTACCCTGTCACACAGGTCTCCGTC
AATCTCATGAGAGGGCATTCCACCATGACTACTCAGGTTTTCACCGACGT
GACGCCTGGTATAAAGGACCCGAGTATCTTCACCCCTCCCGTACCGCCCT
GCGACAAGGTCATGTTCGAGGATACCACAGAACTGGGGTCTGACTTCCTC
AAGAGAGTTCGTCGATCTTTCGAACAGTTCATCTAGATGTTCATCAGCGC
TATGCAGTTGTTCGCGGTCCTGTTGTGGGCCGTACTGGGGCTGTGTGCCG
GGCAGAAGCCTTGCTGCACCCCCGACCAATGGGAGGGCACGACACAGGAG
CTGCAGGGATTCCTGGTGGACGACAAGCTAGGGACCGTGTACGGGACTGT
CGAGGTCTCCTACGACTTCACCAACCAGAAATTAGCACTGGCCGAGAATC
TGAACGAGACCGGGTCGGGAAATACCAAGCTCAAAGTTATACAGGATTAT
AAGAAGGGTACACAGTACGCGATACAAGGCAACTCTTGTATGGAGTTTGC
CCTCAAAGGATCCATGAGAAAGCAATGCATCCCAGACAACGCTACCCACA
TCGGTACGTTCAGTTTCGGTGGGATGGCGCCGGACGGGCTGGAGTGTGAC
GCGTTCATGACGACAGTAGCGGGGATGGACAACGTCTACGCCATTTCCGA
CATGACGCGGGATGGCTGCTACCCTGTCACACAGGTCTCCGTCAATCTCA
TGAGAGGGCATTCCACCATGACTACTCAGGTTTTCACCGACGTGACGCCT
GGTATAAAGGACCCGAGTATCTTCACCCCTCCCGTACCGCCCTGCGACAA
GGTCATGTTCGAGGATACCACAGAACTGGGGTCTGACTTCCTCAAGAGAG
TTCGTCGATCTTTCGAACAGTTCATCTAGATGTTCATCAGCGCTATGCAG
TTGTTCGCGGTCCTGTTGTGGGCCGTACTGGGGCTGTGTGCCGGGCAGAA
GCCTTGCTGCACCCCCGACCAATGGGAGGGCACGACACAGGAGCTGCAGG
GATTCCTGGTGGACGACAAGCTAGGGACCGTGTACGGGACTGTCGAGGTC
TCCTACGACTTCACCAACCAGAAATTAGCACTGGCCGAGAATCTGAACGA
GACCGGGTCGGGAAATACCAAGCTCAAAGTTATACAGGATTATAAGAAGG
GTACACAGTACGCGATACAAGGCAACTCTTGTATGGAGTTTGCCCTCAAA
GGATCCATGAGAAAGCAATGCATCCCAGACAACGCTACCCACATCGGTAC
GTTCAGTTTCGGTGGGATGGCGCCGGACGGGCTGGAGTGTGACGCGTTCA
TGACGACAGTAGCGGGGATGGACAACGTCTACGCCATTTCCGACATGACG
CGGGATGGCTGCTACCCTGTCACACAGGTCTCCGTCAATCTCATGAGAGG
GCATTCCACCATGACTACTCAGGTTTTCACCGACGTGACGCCTGGTATAA
AGGACCCGAGTATCTTCACCCCTCCCGTACCGCCCTGCGACAAGGTCATG
TTCGAGGATACCACAGAACTGGGGTCTGACTTCCTCAAGAGAGTTCGTCG
ATCTTTCGAACAGTTCATCTAGATGTTCATCAGCGCTATGCAGTTGTTCG
CGGTCCTGTTGTGGGCCGTACTGGGGCTGTGTGCCGGGCAGAAGCCTTGC
TGCACCCCCGACCAATGGGAGGGCACGACACAGGAGCTGCAGGGATTCCT
GGTGGACGACAAGCTAGGGACCGTGTACGGGACTGTCGAGGTCTCCTACG
ACTTCACCAACCAGAAATTAGCACTGGCCGAGAATCTGAACGAGACCGGG
TCGGGAAATACCAAGCTCAAAGTTATACAGGATTATAAGAAGGGTACACA
GTACGCGATACAAGGCAACTCTTGTATGGAGTTTGCCCTCAAAGGATCCA
TGAGAAAGCAATGCATCCCAGACAACGCTACCCACATCGGTACGTTCAGT
TTCGGTGGGATGGCGCCGGACGGGCTGGAGTGTGACGCGTTCATGACGAC
AGTAGCGGGGATGGACAACGTCTACGCCATTTCCGACATGACGCGGGATG
GCTGCTACCCTGTCACACAGGTCTCCGTCAATCTCATGAGAGGGCATTCC
ACCATGACTACTCAGGTTTTCACCGACGTGACGCCTGGTATAAAGGACCC
GAGTATCTTCACCCCTCCCGTACCGCCCTGCGACAAGGTCATGTTCGAGG
ATACCACAGAACTGGGGTCTGACTTCCTCAAGAGAGTTCGTCGATCTTTC
GAACAGTTCATCTAGATGTTCATCAGCGCTATGCAGTTGTTCGCGGTCCT
GTTGTGGGCCGTACTGGGGCTGTGTGCCGGGCAGAAGCCTTGCTGCACCC
CCGACCAATGGGAGGGCACGACACAGGAGCTGCAGGGATTCCTGGTGGAC
GACAAGCTAGGGACCGTGTACGGGACTGTCGAGGTCTCCTACGACTTCAC
CAACCAGAAATTAGCACTGGCCGAGAATCTGAACGAGACCGGGTCGGGAA
ATACCAAGCTCAAAGTTATACAGGATTATAAGAAGGGTACACAGTACGCG
ATACAAGGCAACTCTTGTATGGAGTTTGCCCTCAAAGGATCCATGAGAAA
GCAATGCATCCCAGACAACGCTACCCACATCGGTACGTTCAGTTTCGGTG
GGATGGCGCCGGACGGGCTGGAGTGTGACGCGTTCATGACGACAGTAGCG
GGGATGGACAACGTCTACGCCATTTCCGACATGACGCGGGATGGCTGCTA
CCCTGTCACACAGGTCTCCGTCAATCTCATGAGAGGGCATTCCACCATGA
CTACTCAGGTTTTCACCGACGTGACGCCTGGTATAAAGGACCCGAGTATC
TTCACCCCTCCCGTACCGCCCTGCGACAAGGTCATGTTCGAGGATACCAC
AGAACTGGGGTCTGACTTCCTCAAGAGAGTTCGTCGATCTTTCGAACAGT
TCATCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000709 | genome | Sc0000709:29535..31948 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96139_evm0 |
| Biotype | protein_coding |
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