transcript:BL96116_evm0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96116_evm0
Unique Nametranscript:BL96116_evm0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96116_evm0

>transcript:BL96116_evm0-protein ID=transcript:BL96116_evm0-protein|Name=transcript:BL96116_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=258bp
MRRCFSDPLFTRASSGIGKGTAVEFAGLGAHLALTGRNQENLQTTAKACV
ESGTPQDKILLLTGDICDEEVRKNLVDQTVQKFGRIDVLVNNAGIALLAG
IETTDMVEYDKLMNVNVRSVVALTQLCVPHLTKTQGAIVNVSSIWGLRAN
PASLAYSMSKAAVDQFTRCVALELASKQIRVNSVNPGLVPTEVWRSAGVT
EEQIAQMMEYAKSPHALGREGKIAEVAKTIAFLASSDASFITGAQVPVDG
GRHAMCPR
Run BLAST on NCBI

mRNA from alignment at Sc0000539:99333..111306-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96116_evm0 ID=transcript:BL96116_evm0|Name=transcript:BL96116_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=11974bp|location=Sequence derived from alignment at Sc0000539:99333..111306- (Branchiostoma lanceolatum)
ATGAGGCGGTGCTTCAGTGATCCATTGTTCACACGTGAGTGATCGATGTT GGATTGTAACGTTACATTCATATCTACATTTACGCATGCTACCTTTTTTC CGTGAAAAAAACGCCATCAGGCTGTTTGGAAAATAATATTTTTTATAACA ACACTTATATGATCTTACATAACGTTAGGCAATGATAGCCTAGTCAACGT TTCAGTTGATCTTCTCCCTCAGGCCAGGGCCTGAATGGACGTCTTCTTGT TGCATGAGGCTATGTGGTCTTCATGTTTGCAAGTTGTTGCTCACCAGGTG CCAGTGGGGGCTTGCTACCCGATCCGTGAAGTCGGGTCGGGTAGCTATCT TGATATCCGATCCCCCACTTCGCGCTTGCAGTGGTGGTGGGGGTGTCGGA TAGGCAGGAGTCTGGCACCCAAGGCCTAGCAAGGAATTGATATCTGCATA CATGGCTTTGTGGTGCTTGTGTAACCCCACCAGGTGCCAGTTCTGGTATC GGGAAGGGGACAGCTGTGGAATTTGCTGGTCTGGGAGCGCACCTGGCTCT GACTGGGAGGAACCAGGAAAACCTGCAGACCACAGCAAAGGCCTGTGTGG AGTCAGGGACTCCGCAAGACAAGGTGATTGTTTATCAACCATCCTCTGAT GCCATACAGAAGGCTGTTTCCTTACTTCGATATGTAATTACTGCTGTACC ATCGCAGACCAACACAATGTGATACTCATTTAGAAGCTGTGTTTGTCTGC CATCACGACCACTTTCAGTATTCTTGATACTGTATCTTTTTTCCCCTCTC AGATTCTGCTTCTGACAGGGGACATCTGTGATGAAGAAGTGCGGAAAAAC CTCGTCGATCAAACAGTACAGAAGTTTGGCAGGATTGATGTGTTGGTAAT TATAATAACGTTACTACTAATGCTTTACTCATAGTCTTTGAACTAAAATA TACCGAGTTTGGTTCTAAATTTGTGTTCTATATCTGTCTTCCAAAAAACT TAACGTTAACTATTTAATAGTATACTTGCTACATTGTTGAAATGCCTGTC CATGCTATAGCCGTACAATTCAAGGCACAATGCGGTGCTTATAGGATGAA ACACCTTACAAATGTTCGGCCCTCTAAAATGTGATTAGATACTGCTCAAG ATTTGGACTCACACCATGAAAACGTGAAACAATGGGAGCTCAGCTACAAT ACAGCTACTGTTTTATGGGTATTATTTATGTACTCATAAGGTTAACTGTA ATACTAAGGATTTGTAAGTAATTTTACTTTAGTAACATTTCTAACAGTAC CAGGTATATGTGTGAAGTACAAGATACTGGCTGTTGCCATACAAATGATG TTTCCAGCTGTGAAATAAGCTTTAACTTTTCTTTCTGTTTTTTATCATAA GCATTGAGACATTTTACAGGGCTCGAAATAGTGGGTGCCTGTGCACCTGT GTGCACCCAAAATTTGTGCTGTGCACCTAATTTTTGACAGTGGGTGCACC AGTGCATCTAGATATTTTCGTACACTATAGGGTAAAGGTACTACATTTGT ATAATGTACACTAGTATACAGAATATTCTTAAAATATTAGTAAAGAAAGA GCAATATTACCTTTTGTTGTACTTTTTTGATGTATTATTTGTTTGAAATT TGAAGGTAGCTATAGAATTACAGATTAAAGTTCTTAGGAGTGTTAGACGT TGTAATTATGCTTTGCTGACATTCAAGTTTATTTTCTGTGGTGCACCCAA AGTTCTTTCTGTGCACCTAATTTTTTTGGTTGGGTTCACCAGTGCACCTA TACCCAAAAATGAATTTCGTGCCCTCGACAATATTAGATGTTATAGCACA GAATGAATTCATTGTAAAGAAAATGTGCTGTAAACTTGTAAGACAATGTG AAGATAAATTTTATCAGTAAAGCGAAGATTGTACTTCAGTTACTAAGGCA CAGGTTGTACATAAAACATGGCCACGCACATAGCGACAGCTTTTTATGTA CATGTGAGATAATGAATTGTGATACCGGCTAAGTATTATGTGTACATATT ATGCTTGTATACGCAAACTGATGTTGTAACCTAGTGTTTTGGGATTGTAA TTCGAGACGATTGATTGCATTTGAGACGATTGATTTAATAAAATTATGAA AAAATTATAAATCTAAAAATTAAAAAAAATTTAAAACTAAGAAAATCCGT TCTTCGTATCCAAACAGGTGAACAATGCTGGCATTGCCCTTCTCGCGGGC ATAGAGACAACAGATATGGTGGAATATGACAAACTCATGAACGTTAACGT CCGCAGTGTGGTGGCCTTGACTCAGTTGTGCGTGCCACATCTCACAAAAA CACAAGGTAAACCTGCCCCCGTCTTTTATGGGTAATTAACTTAAGACGCT TCATTTCGGAGCAAGAAATGTAGTGCATGTTTACACGTAGGCCATCATTG AGTGTGATGGCAGACTTATAAAGTCTCAGGTTCATGGCTCTAACTGCGCA TGTGCCAGCAAAAGTGTCAAAGGTGAAGGCCTCTGAGACATAAACGAAAC ACGCCTGGACATGCCAATTTATATACAACTCTATCATGCACTAAAATCGA GACATTGTTTTACATTCCTGACACAGAATACTATCATCGTCATCACTATA TTGTATGCTGTTTTAGCCATTAGAATGCACATTATTAGATCGATTGTTAT TCATGTTATATTAAGTTCTTTGAAATTGTTAAATATTAGAAATAGTTGAT TGTTATGTATCTACAAATTGCCATACATTGTACCCGTTACAATTGTCGCG CAATAAAGTTCTTCTTCTGTGTTAAACATTGGTAGACAATAGCTGGTTGT AGGTTAGTGACCTCCAACTAGAATAATGCTTCAATACATTGCTGGAAATC TATCACTTACTTGAGAGACAAATAACCAAATGAAAGCCATTTGGACGGTT TTTTTTTCGTTTTCCTTTTCTTCTAGGCGCCATTGTGAATGTATCCAGTA TTTGGGGGTTGCGTGCGGTAAGCTGGGTATTTCCTTTTATGTATATATAC CATATCATGTCGGATCACAGTGTTAGTGATCCTCCCCTTCCCCTCTTAAT TCGTGGTCATCATCTCTTGGCGGTTGGCCAAGATCTCTTGGCGGTTAGCC AAGATCTCTTGGCGGTTGTATGGTATCGCGACTATCCTACTTTTGTGTGG TATTATCTGTGAGTAGACAAGAAATGGAGTTCTCTTAGGAACTTGTGGAG AAGAGAAATGAATATTCTTTGGATTGCCAAACTGATCTTGAAATGGACAG ACCTTTGTTGTAGCACTTCACTTTTCACTTGCTCGATGTGTAATCATATT AACTGGAATTATTTTGGTTGACTCATGCTTTATATCTACATGTGCTTTAA TTTACTTTACAGAACCCTGCTTCACTTGCGTACAGTATGAGCAAGGCAGC TGTGGACCAGTTCACAAGATGCGTGGCACTTGGTTAGTAAATGTACACTT TGCTTCCTTGATTTTACCTTTGATTGGTTATTTACCATGATTCAGATTGT TTCAAACCAGGAGCAGTCATACAGTAGGAATGGAATGGACCAAGCAATGA TATACAAAGACCGGCTGAAAAAAAGCAGGAACGCCCTGATATGACAATCT TGCACATTTGTATTACAAATATATTTATAAACATGTTATGTNACACATCA GGCCTACGGGAACAACCCGTGTGTTGAGTCGGTAGCTATAGAACGTCAAA GTCGACATCCACCGTCATGGCAACGTGTACATTATTCATGGAAAGTTAGC CGGATGCCGTAGCATTGATAATACTACTATGTCCATGTATTCCTTGTTGT GTTAGGAGCAAACTTTGAGGAAAATATCGTCCTCAGTCCACAATCACACG CAACATGTAGACAAAAAAGTGTTCCTCACAAACCTTTGTCGTCTGCTTGA CAACAGGATTCTGGGTAATGATATGGCGGCGGGAAAATACACGTGCCGTA GGTTGTAGCAACAAAGAGGGGTTTTGATGATTGATCACACTTAGAGTCCA ATTGCAGGTCAGCAATTTTAAGAAAATAAGTTGTCTTGTAAATGATTGTG TTTAGCAGGAAGCGGATGTGACATTTGTCTTATAAACCAGCCGACAACGA TGTAGTGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTAATGC ATGGTTATCGAAGCTTTTCAGACAGTGTTCTGAATACGTTAGTCTGTCAA GTTTGCATTTCTAGCGGTATTACTGATGTTGCATCTAGCACATATTCCTA AATACCCCGTTTTCGAAAAATCCCGAATTTAAGTACCCCACGAATTTATG TTACCCAACGTTACACCGTACGTGAAGACCCAAAATACTTTTCATCTTTC AGAGCTGGCTTCCAAGCAAATCAGGGTCAACTCCGTCAAGTAAGTTCATT ACCTTCGAAACTTCGCCAAGGTTATGTTTTCGCGTGCGCGTGTGTGTTTG TGTGTGTGTTTGTGTGTGAGTGTAAGTGTGTGTGTGTGTGTGTGTGTGTG TGTGTCTGTGTGTGTGTGTATGTGTGAGTGAGTGAGTGTTATAAGAAAGT CTTATTACATAACGACAGAACACAAGGCATTTGCTTCTTGTAAGGCCACA GCAAGTAAATTTTACGGATGACATCCTCTGCAGACTCCAAATTTAGTGCG CGCGGGCGAAAAAAAAACAAGGCGGGCAAAAAAAAACACATTTTCACACT TGAATACCATAAAGCATGTAAGAAGAATTGAAGCGGTAAAACACGTTATA ACAACAAGTATTTTTCTCTGTATTCAATAAAACATTAACTAACACTGATG TCAACATTAAAACCATTAAATCTAAATTTAGATCCACTGGTTTGTATGGC ACATCAAGACGGCAGAGACAAGGTGTCCCGTACACTGGGCACGGGAGTCT CCTGAGTCATGAGGCAGACTGACTGTTACTGCATAATGCTGGCTCTGCTC GCTTTATCTCAGCTGAAGTTCCCTCCGCTATTGCTGTCCTATCTGTCTGA CTGAATTGCCGTGCCTTAGAAATCACCCGTCTTGTCATTCTGTCTTCAAC TGACAGACACTTAGACAATGGTCTACTCAAACCGCATGAAATTAGTTACT TCATTTGACCCTTATCGAATTTGATAATAATGCCACAGAAATTACAGACT ATATTCTTTCGACAAGTTTGACATGAGGGCTACACAGTGTCTTCCTGTAA GTTGGTGACGAGGAGCACTCTTATATAGCTTACATACACAATAATTGTAC AACGCATTTGTACAGATTTTTCACCATTCTTACATGTGCACGTGCCTTTT TGCTGCATCTAGAACGTTTTTGCGATAAAACTCACAGTAGTTTGCAACAT ATTGTACTATCTTCGGTATGTTTACCATTGCCGAAGGTTAAAAAAGAATC TTGCTTTCTATTTCAAAATCAGACGAAAATCAATGCGCGCGCTGATCCAT GAAATTTACTTGCTGTGGCCATATATTTTTTTTGATATTGACAGTTAAAT TGAGCGTCAGTCTAGACTCAAGGGAAAGACTCCACACACCATCTGAAGAA AACACACTTTATTTAAAAAGCAAACCATCTTGGGTTAGATACTGGCAATA TTTGTCGACATGAATGACAAATACGGTAATTCATCATCATATTTGTGAAT TATCAAATAACGTGTGATCCTGGTAAGCTTGCAGAGCTTTAATGGTTTGT CGGGAACATGCGGAAATTCTTTTGACTTAGTGCCAATTGAATTCAATTTT CTCAACTTTTAACTCAGTACACATTGAATTTGACTTTCTCAACTTTTAAC CCAGTACTCATTCAATTCAACTTTGTCAACTTTTAATTCTGTGCAAATTG AATTCAACTTTCTCAACTTTTTACTTCAGTAGACATTCAATTCAACATTG TCAGCTTTTAATCCAGTACACATCGAATTGAAATTTCTCAACTTTTAACT CAATACACATCGGATTTAAGATTTTCAATAGACAATATTATTCCTCTGAA CCGCCAGTGTCAGAGATACAGCAAAGCAGTCTGCAAACCCTTCTAAAACC GGTGAAAAACCGTCGAACCTTGCCTCTAGGTTTCAAGTTCGCTTTGCTCT TGGTTTGCTCATGCCCAGATTTGTCATTCTCTTGCGAAGTGAAACGATTG TGTGAGTCTGAATCTGTCGCTCTTTCGTCGTTGTAGGGTACCCTATCCGT GGTCAATCTAACATCTGAACTTTCCGACGATGTGCCCGCGAGCTTGCATG CCGGCGCCGATGGTCTGATGCCATTGCCATGTGCACGTTTGCCTTTCTTT TCTGGGTACTCGCTGTGCGCGTGTGATATATATTTGTGACCGTCGTCTAC GATAGAGAGCGTTGCGCTGATTAGAGAGTTCGACACGTTACCCATGCTCT CATGGACAGGTGATGCTGCTGCTTTGTTAACGATCTTCTTCTCAGCATTC GATACAACCTTGTTGTCGTCAGATTCAGTCATCGGTTCTTGCTTATCTCC GTCGAGCTGTGGAAGCCTGTCAAATAACTTCGCCTTGTCGTCTTGTTTCT TCACAAGTTCTTGTTTCTCTTCTAACAGTGCAGCGGACATCTTGTCGCTA TTCAGGGAATCCAGACTATATTTCCTCCACGTACGTTTCCGAATGCGACG CTCCTCTTCCATCATACGTTTCCTGCATCCGTCTCTCATCGCCTTGACGG TTTTCTTAGACTCCTCCGTTCTAAGACTGATCTTCTTCTCCTGTTTGTTT TTCAATGACAAGTGTCCGTCGTCAGTCTCCAGAGCCTCCAGGATGTCTTC GGTTAAGTACAGACGATCTGTGTCGTTAGGCGGCGCTCCTAACTTCTGGT CGACAGGTGCGTCTTTTGTCACCATTTCAAGGATGGAGATCGGTTCCACA CCTTTGCTGCCGGGAAACTTCGGTTGGTCTGTAACCTCACCATGACGTTC CCTTTCGAACTGACGCAATCCGTCTTCTATGTCGTCCAACGTGTACAATG TCTGGGTCTCACTCTCTTCGTTATCAGAATCTACGGCAAACACAAAGCAG AATGAAAGGAACACATTATACATTTGATTAATAGAAATAAATAAGATCCT ATATATCCTATATGCTGGTGTATAAATGTGTTCTCTCTTTCAAATGCTGG TATCATTGATTTTCTATTGTTGTTTTGACAATGCGATGAGAACCTCACCC CTCCACAATCCTGGCTATGTGATCGACTAATCTTCTCTGAATTCTGCAGT CTTCATGTTTTCTCAAGTCCTCTGCCCTCACCAGGGGAAGGGTTTGAATT AACCGTGGTTAAATTTTTATGCCAACCCCGTCTTACATTTATGGCTTAAG GGGAGACTAAACAAATAAAAACAAGGCTCCAAAGCATTAAATATCATTTC TTGGTGAGATGTTTGTGAAATCTGGGCAGTTTAGGGTGGCTATGGTAGGA AACAACGTTGGGTAACGGAATCAAAAGAATCGTGACTAAATTGAAGTAAG AACATGTCACGTATGGCTGACGAAAGTGATTAATTTATGCTAGGGTCACA TTTTCAATCCGGGGCCCGGTCGGGCAGTCTTTAAGAACGAAAAGTATGAT ATAAAAGACAACAAAAACACAAAACGTACCCAAAATTATTCAAGAGCATA GCTTGTGCAAATTTATTGACATACACTTTGATTTTTCGTTTCCGCAAACA GCCCGGCCGGGCCCCGGTTAGGAAATGTGACCCTAGCATAATGAAAACCG TGCACTGCAGTGAAACAACAATACAAAGTAAGATATACAAAGTACAAATA GAAAATATACACGTTCTGTCAGCAAATTTACAAATAACAACATATCAAAT AGATACATTGAAATGATATGATACACGAACTAAATTCACCAGACAAAGGA AATCTCAGTCTGGCCACAAAGCAAGGTGAGAGGAACTGTCCAATGCATGC ATGGACTATCCCTTTAAACTGAAAACTTGACTACTTATCTTACCTTGTGC TTCTGCCTTTGGACTGTAGTCGTCATCTTCACTTATATAGAACAGAACTG TATTCCCAACGTCCGACATGACGATGCAAAGTTGTTGCAGATTGGGAGTC CAGCGTGTGGCTGAAAGTCAAGCTCTCCCAACACAAGATCACGCCTCTCC TTTTACTGACCGTCACAGTGACGGCGCAGATTGTTGTGTTGGCAACACTG CAACAGTCAGAATAGATGACGTGTTCTACAACACACTTCGTCTAAACAAT GGAAGTGTCGCCATGGAGACGGTTGTTCGATAAAACGACGTTACGGTATT CTGGAACACGCGCAATCCGCTGAAGTGTTCGATGGACCAAGGACATTATT TTAAATACTGATATAGTTATCTTCGCCGAGTACTTGTACTCGGGAAGATT ATGTTTTCGGTTGAAAAATCTGTTGGGTGGGTCTGTATGTATGTCAGGAG CATAACTCAAGAAAGCTTCAATGAATCTTTATGATTTTTGGTAGGTGCGT AGTGGTTGTGCAAAGGAAGGTCAAGTTCGAAAATGGTTTACCTTGCGTTA TCTAACAGTACTGCAGCGGACTTTTAACTTTTTTGTGTTTGTATGTAGGC CAAAAAAGGGACGGAAACGTTGATAGATCTTCATGATTTTTTGTAGGTGT GTAGATGTTGTGGAAACGGAGGTCAAGTTCAAAAATGGTTCCCCTGGCAT TTTCCGTTGGTTTTGCAGCAGGCTTTGTGTGGATGTGTATTTGTATGTCG CCAGCATAACTCGAGAAGCTGTTGATGGATCTGTATGATATTTAGTAGAT GGGTAGGGTTTACAGAAAGGAAGGTCAAGTTCGATAATGGGCCTTGTAGT GGGTACCTAAGGTACTGCAGCGAAGCTTCAAAATTTAGGGGCATATTTTC TGAGAGTGCTATGGTCATGATTTTTGTGTGGTAGATAGTTCATGACACAG GAAGTAAGTTCCGTAAATTTTGCCCCCCTAGCGACTTGTTATTGATAATA TTGGCACAGCAATTACAGACTATATCCTATTACATGTTTGATATGCTTTG TCTTCCTGTAAAGCTAGGGTCACATTAAACTCACGTCGTACCTGCGATGG GGTTTCTTCCGTCATGACAGCGCCGTACGTCGTACGTTTGGGGAAAAACG GGTGCAAATAGTTAACACATACAACGTCGTGGTCACATGTAACGCAGGTA CATCGCACGATGTTTGTTTTTTTAGTGTACCTAGGTCAATCGCAGGTAAA TCGCACGTAAAATTAGCCATCGACGAGCTTCCTACGCCGAAAAATGTAAC TAAAGATGATTTTGAACATGTTCAAAATTTCATCCTTCGTCGCACGATTT TTTGCAGCCCACAATTCGTCTTTAGCCACGGGCCTTTTTTTTCTAATGAT GATTGAAAAATTCATAGATTTTAACCGCATTCTGATGGCTTAAGTTTTCA CTGATATTGCCAATGTTGATGCAAAGTGTAATCACCAGAACACGGTAGCA ACCTGAAAACAACGAACCCGTGGAAGAGCCTGCTTCCAAGGTTAGATATT CCACGTGTCGGATCTAGTACCACACACAGGTGATGCATACAATTGTTTGC TGTCTGTATACACGTGGGTTCATGATTAAATCAGACCTCAGTCCTATCCT GTCTCTATTTTTAGTTTGCCAAGAGAACAGTTTGCGGATGGCACAGAGAA AGAATATGGCAGGCCAGTTGTATTGTCCATCAAAAAAGAAAGCACATAAT AGGCAAAAAAAAGTCCAACAAAAACTGAAACTGAAAATAGAAACAGGATA GGACTGAGGTATGATCTAATCATAAACCCACGTGTATACAGACATCAAGC AATTATATACGCGTGGTTCTGGACCTGACACGTGGAAACTCTAAACTTGG AAGCAGGCTCTTCTACGGGCGCACTGTTTTCTGGTTGCTATTGTGTTCTG ATGGTTACAATATGCATCAACATCGGCAATATATCAGGGTAACTGAAACC ATCAGAACATGGTCGAAATTTATGAATTCGTCACCTCATCATTAGATAAA AAGGCCGCAGTAAAGCCTGAATATGGGGCTATAAAAATCGTCCGAAGATG GATGAAATTTTGAACATTGCCCGACGATCTGCGATAGCTGATTTTACCTA CGATTTACCTGCGATTTACCTGCGATCATCGTGCGTTGTACGGGAAATGC ATCGTAGGTGCATCGTAGGTACGACGTGAGTTTAATGTGACAGGGGCTTA AGTTGCAATTGGTGACGAGGAGCAATCTTATTACAGCTTGCATACACAAT AATTGCAAGTGCTTTTTTACGGCATCTAGAACGTTTTTGCGATAAAACTG GATCAGTATGCTGATAGATGACAGCACAGTACATGTAGCAGGGCACACTG TACAGGACATAAAAACAAAGGCTGTGGTGGATTTGGAATGTGTGGCTAAA TGGTCCAACAACAATATGCTTAAACTCAACAACGGCAAGACAGAGACCAT GCTGGTTGGGACATCCAGGAAGACAAACCTCGCACCTCCTCTACAGCTGG ACCTCTGGGGAAAGCGTTTGCAACAGGTACCCACTGTCAAGCTACTGGGA GTACACGTAGACCAGAATCTCACATTTGATGATCACGTAGACCATGTAGT TAAGAAGTGTAACAGGAGCATGGCGCAAGTGAGCAGGGTGAGGAAGTCAC TTCCGCGTAGAGTGAGAATAGCATTGATTCAAGCTCTCGTGCTTACAAAT CTAGACTGCTGCAGCTCGGTGTGGGCAAGTACATCTGTAAAGAACATAAA ACGACTACAAGTCATACAGAACAGAGCGGCCAGGATCGCCCTCGGAACTG ATAGGTTCACAAGCAGGGACGCTCTGCTGCAGACGCTAGGGTGGTTGTCC GTGAAAGACAGAATCCAACAGGAAAGCATGATTACTTTCCGTAAAATCAT GGACAACAAACAGCCAGTTTCTTTGTATAAACAGATCACAATGCAGTCAC ATGGTTATCAAAAACGGTCATCTAAATCACAAACCATCCTCTTGCCGAAG CCCAGAACAAATGCTCAGAAAAATCGCTTCTTGTATAGAATGTCCAGCAC CTGGAATGATTTGAAAGTGTAAATTAGTTTGATATATTGTCAACTTTGTA AAATTGTGTATACACAGCCTTATGCTTCTTTTATCATTTATGTACATATG TAAATTCTGTGGTGTTTATATGTGTCATGTAGTTTTGTCCAGTCAGTTTG GACCACAGGAAGAGTAGCTGTTAAGCTAATTGTGGATCCTAATAAACTCA ACTCAACTCAACTAACAGTTGTTTGCAACATATTGTACTATCTTTGGTAT ATTGACCATTGCCGAAGGGTACAAAAAATCTTGTTTTTATTTCAAAATCA GCCGAAAATCAATGCGCGCGCTGATGTCATCCATAAAACTTACTTGCTGT GGCCTAAAATAAAATAAAAAAATACTCCCTTTCCACAGCCCCGGTTTGGT TCCGACAGAGGTGTGGAGGAGTGCAGGAGTAACTGAGGAGCAAATCGCCC AAGTAAGAGAAGTTATTTTTTTTTTGGCTTAAACATTCGGTTTACTAACT TCTTTCAAAAAACACTTAAGTTTGTTCCAACATGTACAAAGACATTCTCT TCTTGTCTTTATTAGATGATGGAATATGCCAAATCGCCGCATGCCCTGGG CAGGGAAGGGAAGATTGCAGAAGTCGCCAAGACGATCGCGTTCCTCGCCT CGTCGGACGCGTCGTTCATTACCGGCGCCCAGGTCCCCGTGGACGGCGGA CGGCACGCGATGTGCCCGCGCTAA

Coding sequence (CDS) from alignment at Sc0000539:99333..111306-

>transcript:BL96116_evm0 ID=transcript:BL96116_evm0|Name=transcript:BL96116_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=6993bp|location=Sequence derived from alignment at Sc0000539:99333..111306- (Branchiostoma lanceolatum)
ATGAGGCGGTGCTTCAGTGATCCATTGTTCACACGTGCCAGTTCTGGTAT
CGGGAAGGGGACAGCTGTGGAATTTGCTGGTCTGGGAGCGCACCTGGCTC
TGACTGGGAGGAACCAGGAAAACCTGCAGACCACAGCAAAGGCCTGTGTG
GAGTCAGGGACTCCGCAAGACAAGATTCTGCTTCTGACAGGGGACATCTG
TGATGAAGAAGTGCGGAAAAACCTCGTCGATCAAACAGTACAGAAGTTTG
GCAGGATTGATGTGTTGGTGAACAATGCTGGCATTGCCCTTCTCGCGGGC
ATAGAGACAACAGATATGGTGGAATATGACAAACTCATGAACGTTAACGT
CCGCAGTGTGGTGGCCTTGACTCAGTTGTGCGTGCCACATCTCACAAAAA
CACAAGGCGCCATTGTGAATGTATCCAGTATTTGGGGGTTGCGTGCGAAC
CCTGCTTCACTTGCGTACAGTATGAGCAAGGCAGCTGTGGACCAGTTCAC
AAGATGCGTGGCACTTGAGCTGGCTTCCAAGCAAATCAGGGTCAACTCCG
TCAACCCCGGTTTGGTTCCGACAGAGGTGTGGAGGAGTGCAGGAGTAACT
GAGGAGCAAATCGCCCAAATGATGGAATATGCCAAATCGCCGCATGCCCT
GGGCAGGGAAGGGAAGATTGCAGAAGTCGCCAAGACGATCGCGTTCCTCG
CCTCGTCGGACGCGTCGTTCATTACCGGCGCCCAGGTCCCCGTGGACGGC
GGACGGCACGCGATGTGCCCGCGCTAAATGAGGCGGTGCTTCAGTGATCC
ATTGTTCACACGTGCCAGTTCTGGTATCGGGAAGGGGACAGCTGTGGAAT
TTGCTGGTCTGGGAGCGCACCTGGCTCTGACTGGGAGGAACCAGGAAAAC
CTGCAGACCACAGCAAAGGCCTGTGTGGAGTCAGGGACTCCGCAAGACAA
GATTCTGCTTCTGACAGGGGACATCTGTGATGAAGAAGTGCGGAAAAACC
TCGTCGATCAAACAGTACAGAAGTTTGGCAGGATTGATGTGTTGGTGAAC
AATGCTGGCATTGCCCTTCTCGCGGGCATAGAGACAACAGATATGGTGGA
ATATGACAAACTCATGAACGTTAACGTCCGCAGTGTGGTGGCCTTGACTC
AGTTGTGCGTGCCACATCTCACAAAAACACAAGGCGCCATTGTGAATGTA
TCCAGTATTTGGGGGTTGCGTGCGAACCCTGCTTCACTTGCGTACAGTAT
GAGCAAGGCAGCTGTGGACCAGTTCACAAGATGCGTGGCACTTGAGCTGG
CTTCCAAGCAAATCAGGGTCAACTCCGTCAACCCCGGTTTGGTTCCGACA
GAGGTGTGGAGGAGTGCAGGAGTAACTGAGGAGCAAATCGCCCAAATGAT
GGAATATGCCAAATCGCCGCATGCCCTGGGCAGGGAAGGGAAGATTGCAG
AAGTCGCCAAGACGATCGCGTTCCTCGCCTCGTCGGACGCGTCGTTCATT
ACCGGCGCCCAGGTCCCCGTGGACGGCGGACGGCACGCGATGTGCCCGCG
CTAAATGAGGCGGTGCTTCAGTGATCCATTGTTCACACGTGCCAGTTCTG
GTATCGGGAAGGGGACAGCTGTGGAATTTGCTGGTCTGGGAGCGCACCTG
GCTCTGACTGGGAGGAACCAGGAAAACCTGCAGACCACAGCAAAGGCCTG
TGTGGAGTCAGGGACTCCGCAAGACAAGATTCTGCTTCTGACAGGGGACA
TCTGTGATGAAGAAGTGCGGAAAAACCTCGTCGATCAAACAGTACAGAAG
TTTGGCAGGATTGATGTGTTGGTGAACAATGCTGGCATTGCCCTTCTCGC
GGGCATAGAGACAACAGATATGGTGGAATATGACAAACTCATGAACGTTA
ACGTCCGCAGTGTGGTGGCCTTGACTCAGTTGTGCGTGCCACATCTCACA
AAAACACAAGGCGCCATTGTGAATGTATCCAGTATTTGGGGGTTGCGTGC
GAACCCTGCTTCACTTGCGTACAGTATGAGCAAGGCAGCTGTGGACCAGT
TCACAAGATGCGTGGCACTTGAGCTGGCTTCCAAGCAAATCAGGGTCAAC
TCCGTCAACCCCGGTTTGGTTCCGACAGAGGTGTGGAGGAGTGCAGGAGT
AACTGAGGAGCAAATCGCCCAAATGATGGAATATGCCAAATCGCCGCATG
CCCTGGGCAGGGAAGGGAAGATTGCAGAAGTCGCCAAGACGATCGCGTTC
CTCGCCTCGTCGGACGCGTCGTTCATTACCGGCGCCCAGGTCCCCGTGGA
CGGCGGACGGCACGCGATGTGCCCGCGCTAAATGAGGCGGTGCTTCAGTG
ATCCATTGTTCACACGTGCCAGTTCTGGTATCGGGAAGGGGACAGCTGTG
GAATTTGCTGGTCTGGGAGCGCACCTGGCTCTGACTGGGAGGAACCAGGA
AAACCTGCAGACCACAGCAAAGGCCTGTGTGGAGTCAGGGACTCCGCAAG
ACAAGATTCTGCTTCTGACAGGGGACATCTGTGATGAAGAAGTGCGGAAA
AACCTCGTCGATCAAACAGTACAGAAGTTTGGCAGGATTGATGTGTTGGT
GAACAATGCTGGCATTGCCCTTCTCGCGGGCATAGAGACAACAGATATGG
TGGAATATGACAAACTCATGAACGTTAACGTCCGCAGTGTGGTGGCCTTG
ACTCAGTTGTGCGTGCCACATCTCACAAAAACACAAGGCGCCATTGTGAA
TGTATCCAGTATTTGGGGGTTGCGTGCGAACCCTGCTTCACTTGCGTACA
GTATGAGCAAGGCAGCTGTGGACCAGTTCACAAGATGCGTGGCACTTGAG
CTGGCTTCCAAGCAAATCAGGGTCAACTCCGTCAACCCCGGTTTGGTTCC
GACAGAGGTGTGGAGGAGTGCAGGAGTAACTGAGGAGCAAATCGCCCAAA
TGATGGAATATGCCAAATCGCCGCATGCCCTGGGCAGGGAAGGGAAGATT
GCAGAAGTCGCCAAGACGATCGCGTTCCTCGCCTCGTCGGACGCGTCGTT
CATTACCGGCGCCCAGGTCCCCGTGGACGGCGGACGGCACGCGATGTGCC
CGCGCTAAATGAGGCGGTGCTTCAGTGATCCATTGTTCACACGTGCCAGT
TCTGGTATCGGGAAGGGGACAGCTGTGGAATTTGCTGGTCTGGGAGCGCA
CCTGGCTCTGACTGGGAGGAACCAGGAAAACCTGCAGACCACAGCAAAGG
CCTGTGTGGAGTCAGGGACTCCGCAAGACAAGATTCTGCTTCTGACAGGG
GACATCTGTGATGAAGAAGTGCGGAAAAACCTCGTCGATCAAACAGTACA
GAAGTTTGGCAGGATTGATGTGTTGGTGAACAATGCTGGCATTGCCCTTC
TCGCGGGCATAGAGACAACAGATATGGTGGAATATGACAAACTCATGAAC
GTTAACGTCCGCAGTGTGGTGGCCTTGACTCAGTTGTGCGTGCCACATCT
CACAAAAACACAAGGCGCCATTGTGAATGTATCCAGTATTTGGGGGTTGC
GTGCGAACCCTGCTTCACTTGCGTACAGTATGAGCAAGGCAGCTGTGGAC
CAGTTCACAAGATGCGTGGCACTTGAGCTGGCTTCCAAGCAAATCAGGGT
CAACTCCGTCAACCCCGGTTTGGTTCCGACAGAGGTGTGGAGGAGTGCAG
GAGTAACTGAGGAGCAAATCGCCCAAATGATGGAATATGCCAAATCGCCG
CATGCCCTGGGCAGGGAAGGGAAGATTGCAGAAGTCGCCAAGACGATCGC
GTTCCTCGCCTCGTCGGACGCGTCGTTCATTACCGGCGCCCAGGTCCCCG
TGGACGGCGGACGGCACGCGATGTGCCCGCGCTAAATGAGGCGGTGCTTC
AGTGATCCATTGTTCACACGTGCCAGTTCTGGTATCGGGAAGGGGACAGC
TGTGGAATTTGCTGGTCTGGGAGCGCACCTGGCTCTGACTGGGAGGAACC
AGGAAAACCTGCAGACCACAGCAAAGGCCTGTGTGGAGTCAGGGACTCCG
CAAGACAAGATTCTGCTTCTGACAGGGGACATCTGTGATGAAGAAGTGCG
GAAAAACCTCGTCGATCAAACAGTACAGAAGTTTGGCAGGATTGATGTGT
TGGTGAACAATGCTGGCATTGCCCTTCTCGCGGGCATAGAGACAACAGAT
ATGGTGGAATATGACAAACTCATGAACGTTAACGTCCGCAGTGTGGTGGC
CTTGACTCAGTTGTGCGTGCCACATCTCACAAAAACACAAGGCGCCATTG
TGAATGTATCCAGTATTTGGGGGTTGCGTGCGAACCCTGCTTCACTTGCG
TACAGTATGAGCAAGGCAGCTGTGGACCAGTTCACAAGATGCGTGGCACT
TGAGCTGGCTTCCAAGCAAATCAGGGTCAACTCCGTCAACCCCGGTTTGG
TTCCGACAGAGGTGTGGAGGAGTGCAGGAGTAACTGAGGAGCAAATCGCC
CAAATGATGGAATATGCCAAATCGCCGCATGCCCTGGGCAGGGAAGGGAA
GATTGCAGAAGTCGCCAAGACGATCGCGTTCCTCGCCTCGTCGGACGCGT
CGTTCATTACCGGCGCCCAGGTCCCCGTGGACGGCGGACGGCACGCGATG
TGCCCGCGCTAAATGAGGCGGTGCTTCAGTGATCCATTGTTCACACGTGC
CAGTTCTGGTATCGGGAAGGGGACAGCTGTGGAATTTGCTGGTCTGGGAG
CGCACCTGGCTCTGACTGGGAGGAACCAGGAAAACCTGCAGACCACAGCA
AAGGCCTGTGTGGAGTCAGGGACTCCGCAAGACAAGATTCTGCTTCTGAC
AGGGGACATCTGTGATGAAGAAGTGCGGAAAAACCTCGTCGATCAAACAG
TACAGAAGTTTGGCAGGATTGATGTGTTGGTGAACAATGCTGGCATTGCC
CTTCTCGCGGGCATAGAGACAACAGATATGGTGGAATATGACAAACTCAT
GAACGTTAACGTCCGCAGTGTGGTGGCCTTGACTCAGTTGTGCGTGCCAC
ATCTCACAAAAACACAAGGCGCCATTGTGAATGTATCCAGTATTTGGGGG
TTGCGTGCGAACCCTGCTTCACTTGCGTACAGTATGAGCAAGGCAGCTGT
GGACCAGTTCACAAGATGCGTGGCACTTGAGCTGGCTTCCAAGCAAATCA
GGGTCAACTCCGTCAACCCCGGTTTGGTTCCGACAGAGGTGTGGAGGAGT
GCAGGAGTAACTGAGGAGCAAATCGCCCAAATGATGGAATATGCCAAATC
GCCGCATGCCCTGGGCAGGGAAGGGAAGATTGCAGAAGTCGCCAAGACGA
TCGCGTTCCTCGCCTCGTCGGACGCGTCGTTCATTACCGGCGCCCAGGTC
CCCGTGGACGGCGGACGGCACGCGATGTGCCCGCGCTAAATGAGGCGGTG
CTTCAGTGATCCATTGTTCACACGTGCCAGTTCTGGTATCGGGAAGGGGA
CAGCTGTGGAATTTGCTGGTCTGGGAGCGCACCTGGCTCTGACTGGGAGG
AACCAGGAAAACCTGCAGACCACAGCAAAGGCCTGTGTGGAGTCAGGGAC
TCCGCAAGACAAGATTCTGCTTCTGACAGGGGACATCTGTGATGAAGAAG
TGCGGAAAAACCTCGTCGATCAAACAGTACAGAAGTTTGGCAGGATTGAT
GTGTTGGTGAACAATGCTGGCATTGCCCTTCTCGCGGGCATAGAGACAAC
AGATATGGTGGAATATGACAAACTCATGAACGTTAACGTCCGCAGTGTGG
TGGCCTTGACTCAGTTGTGCGTGCCACATCTCACAAAAACACAAGGCGCC
ATTGTGAATGTATCCAGTATTTGGGGGTTGCGTGCGAACCCTGCTTCACT
TGCGTACAGTATGAGCAAGGCAGCTGTGGACCAGTTCACAAGATGCGTGG
CACTTGAGCTGGCTTCCAAGCAAATCAGGGTCAACTCCGTCAACCCCGGT
TTGGTTCCGACAGAGGTGTGGAGGAGTGCAGGAGTAACTGAGGAGCAAAT
CGCCCAAATGATGGAATATGCCAAATCGCCGCATGCCCTGGGCAGGGAAG
GGAAGATTGCAGAAGTCGCCAAGACGATCGCGTTCCTCGCCTCGTCGGAC
GCGTCGTTCATTACCGGCGCCCAGGTCCCCGTGGACGGCGGACGGCACGC
GATGTGCCCGCGCTAAATGAGGCGGTGCTTCAGTGATCCATTGTTCACAC
GTGCCAGTTCTGGTATCGGGAAGGGGACAGCTGTGGAATTTGCTGGTCTG
GGAGCGCACCTGGCTCTGACTGGGAGGAACCAGGAAAACCTGCAGACCAC
AGCAAAGGCCTGTGTGGAGTCAGGGACTCCGCAAGACAAGATTCTGCTTC
TGACAGGGGACATCTGTGATGAAGAAGTGCGGAAAAACCTCGTCGATCAA
ACAGTACAGAAGTTTGGCAGGATTGATGTGTTGGTGAACAATGCTGGCAT
TGCCCTTCTCGCGGGCATAGAGACAACAGATATGGTGGAATATGACAAAC
TCATGAACGTTAACGTCCGCAGTGTGGTGGCCTTGACTCAGTTGTGCGTG
CCACATCTCACAAAAACACAAGGCGCCATTGTGAATGTATCCAGTATTTG
GGGGTTGCGTGCGAACCCTGCTTCACTTGCGTACAGTATGAGCAAGGCAG
CTGTGGACCAGTTCACAAGATGCGTGGCACTTGAGCTGGCTTCCAAGCAA
ATCAGGGTCAACTCCGTCAACCCCGGTTTGGTTCCGACAGAGGTGTGGAG
GAGTGCAGGAGTAACTGAGGAGCAAATCGCCCAAATGATGGAATATGCCA
AATCGCCGCATGCCCTGGGCAGGGAAGGGAAGATTGCAGAAGTCGCCAAG
ACGATCGCGTTCCTCGCCTCGTCGGACGCGTCGTTCATTACCGGCGCCCA
GGTCCCCGTGGACGGCGGACGGCACGCGATGTGCCCGCGCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96116gene:BL96116Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96116_evm0transcript:BL96116_evm0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96116_evm0-E1BL96116_evm0-E1-1564476830-479810Branchiostoma lanceolatumexon
BL96116_evm0-E2BL96116_evm0-E2-1564476830-479808Branchiostoma lanceolatumexon
BL96116_evm0-E3BL96116_evm0-E3-1564476830-479806Branchiostoma lanceolatumexon
BL96116_evm0-E4BL96116_evm0-E4-1564476830-479804Branchiostoma lanceolatumexon
BL96116_evm0-E5BL96116_evm0-E5-1564476830-479802Branchiostoma lanceolatumexon
BL96116_evm0-E6BL96116_evm0-E6-1564476830-479800Branchiostoma lanceolatumexon
BL96116_evm0-E7BL96116_evm0-E7-1564476830-479798Branchiostoma lanceolatumexon
BL96116_evm0-E8BL96116_evm0-E8-1564476830-479796Branchiostoma lanceolatumexon
BL96116_evm0-E9BL96116_evm0-E9-1564476830-479794Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000539genomeSc0000539:99333..111306 -
Properties
Property NameValue
Transcript idBL96116_evm0
Biotypeprotein_coding