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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96098_evm1 >transcript:BL96098_evm1-protein ID=transcript:BL96098_evm1-protein|Name=transcript:BL96098_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=257bp
LPTGMTMFPTMTIPEALSVNECAEGTHNCSVYASCTDTPNSYICDCISGY
SGDGVSCILKVPPKVNIRPSQIQNLVVRETITITCNATRFPDDFSYLWTV
DETAIPNQSGPVFRSEFASGVHQVKCIVSSSGGEMESADCTVTVLPEDTM
TFVSSIRITARNFTPEMADSNSAAFQSISAEVKNWYLQAARSVPGNISIR
VKDARPGSIITSQNINVQGSVLQDQDLYYSISNALRTAVQTPSSLGVDPN
NVTLSVQ Run BLAST on NCBI mRNA from alignment at Sc0000473:119437..123369+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96098_evm1 ID=transcript:BL96098_evm1|Name=transcript:BL96098_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3933bp|location=Sequence derived from alignment at Sc0000473:119437..123369+ (Branchiostoma lanceolatum)
CTTTACCAACAGGGATGACAATGTTCCCGACAATGACGATACCAGAAGCC
CTATGTAAGTTGAATTTTGCATCCTTCCTTATACCCTGATGTTTGTACTT
TGACAATCTAGTTCTAACAGCAATATGAGATGTAGAATTGTTCGCTGCCA
TACATGAGTTTACAAATTACCAAATAGACTTGGGGCTTATAGGTCTGTTC
GTTTCTGTTTACATGCCACTTGTTAAGTGCCTCAAGACGCAGCACACAAG
GTTTTGTAATTCAAGCACAAGCTGTGAAAGACTGTTTTAACAGTATGAGA
ATAATGTGTCATTGCTTTTCGATTGGATCAAACTTAAAAGGTTGATCTAC
TTAAAAGTTTGATCTAATTACATTGGAATGACACCCTGTTTTTATAGATA
AGTGTTGAAGGTGCTAAAGTTGTGGGTATTGTAAAAGAAAATTAACATAT
AGCTTATAGATAAATGCAAATTGTTTCTTCATATGCGATGTATTTTGTCT
TGTCTTGCAATTGTATCTTATGTATGCCTTGATATGTACTGAAGTTGCTT
TCAGTCGTAAACATCTCAACGTTCTTTGTGAAAATTTGTATTGTATTTTG
TATATTGTTAAGTTACCAGGGATAACCTTTGCTAGTTGGGTATACCTGGC
TGTATCTTTTTCTACAGCCAAATAGATAAATAAATGAAACCAACTAAAAT
GATGAAATCATTTTCTCACGGGTAAAATTGAAAAGAAACAATCGATGAAA
CAAGCATTTCATAATAGCAGAATAGCAGGCAACCAGTGCTTCAGGCATAA
AACCTAGCACGTATGAAGGTTACCGACCCCAACCATAAAAAAAAGCCCCA
AAAGCAAGTAAATACATTGATAGACGTTTTAGACTAGTCTTGAAATAAGA
AAGCTATTTTTTTTTTAGCTGTAAATGAGTGCGCAGAAGGGACCCACAAC
TGCAGCGTTTATGCCTCCTGCACTGACACACCCAATAGCTACATATGTGA
CTGTATATCAGGCTACAGCGGCGACGGGGTTAGCTGTATCCTAAAAGGTA
AAGGTAGCCCGCATCCTTTTTGAGTGCATTGTTATCAATTGTGTCTAGGA
CACGGTATCAAAAGGCGTAGCCCAGCCCTCCGTTGCATTTTACCTCTCCA
ACCGAAGTCAGGTTCTAGTTTTTACACACTACAGTCGGGTGAGAAAAGCC
GTGCAAAAGTGCAAGCAAACAGCATATGTGGCATGTCAGGAAATTCGAAA
CCAAGGCCTCTGTGTTATCAGCTAAACCTACACGTTACGCCAAAACAACG
CCACGCCGTGACAAATGATTAATGAAAAACTCACTGAGAAATCTCTTGTA
TATCTATTATATCATTATTATTTTGAAGATGGGTTACTAAAGAAAATGGT
CTACGATTTCATTCTACCTTGTTAGGTTCTAAACAAAACTATTCTGGTCA
TTCGGTTTCATTTCAAGTGTCATTCAGTTCCTTGCGTCCTTGCGTCAAAA
AATAGAGAGTCTTGCATTCATTATATAATTATTGTTTTCTTTGAAAAGTT
CCACCTAAGGTCAACATACGTCCCTCGCAGATTCAGAACCTGGTAGTGAG
AGAAACGATCACAATTACATGCAACGCAACAAGATTTCCTGATGATTTTA
GCTACCTGTGGACTGTGGATGAAACAGCTATACCAAATCAGAGCGGCCCT
GTCTTCAGGTTGGTGCTTACTTAACATATGGTTTTTGTATATGACGTCAC
CACCACCTTTATAGTCGGTCAAACCTGGAAGAGTCAGATCTATTACGTAA
CTGTGATAACAGAACGTGTAGGGCACGTTTTACTATTTAATCGTGTCATA
ATAACACTGGCTCAAACAACCTGTATTACCTTTATCTGTTTATCTCTACT
GGGTTTACTTTGATTTGAATTGATTTGAACATTACACCTTTATTTCGTAT
TCAGTGCTAGCATGGTGTCAAATCTTAAATCATTATCGGGCTAACTTACG
CTTTGCAAAGTGCATTGGGAGAAAAAGCAGGGACAAAATGTAGGAAAACA
GGATTTGCCAAAGTAAATATCAGAAACCTTTTACTTTTCTACTAAACTGT
TTAAGCCTTCAGGCTTAGGGGTACCAAGTAAGGTAATTTAGACGTAATAT
AAACGTGAATTTTGCAGATCTGAATTTGCAAGTGGTGTTCACCAGGTCAA
GTGCATCGTGAGTAGTTCAGGTGGTGAGATGGAGTCCGCTGATTGCACTG
TGACGGTTCTCCCAGAAGGTTTGGACTCCAAGAATATTGCAATTTTTTTT
TTTTTACTGAATATTCTTTTTTTACTTAACATATCATTTTTTAATATGCT
AAACGTAATGATATTGTGTTCAAGCATACTACTAATGGTTTGAAAAACAG
TAAATACATAATAATTGCAGCTTACGGTAGCGTCAACATATTTTGCCAGA
ATGAGTCGATTAAACATGAGACTAATTTTTAATAATTGCAGCTTACGGTA
GCGTCAACATATTTTGCCAGAATGAGTCGATTAAACATGAGACTAATTTG
AACATTGATTATAATGCATGCGCAGTAATAGCACTGCCAAGCCTAAAACC
GTGGTATATAGATTTAGATAGTAAGCAGTTGACCGGCACATAATGGAGTG
GCAATAGTCATATGCATCTATTTTGTTTTGAGGGAAAAATCACATTTAGA
ATGAAAATTATTCAAACATATAGAACAAAACAAAAATTGATAAGTGTACA
TTTAAAAAGAGACTTTGCAAAGCATGCAAGCTAAAGGCCAAATATATTTA
GTTTTTCTCCTATTTAGTCCACACAATTCCTAGATATCGTTACTGGGCTA
CAACTAAGTTCTATATCCTCTATATTCCTCCCAGATACCATGACGTTTGT
CTCTAGCATCAGGATAACCGCCAGGAATTTCACTCCAGAGATGGCAGATT
CTAATTCAGCTGCTTTCCAGAGTATCAGCGCAGAGGTCAAGAACTGGGTT
AGATATAACAACATATGTTTATCTGTGTACCTTTATGAAAGCATATTTCA
AGGATATGTCAAACTGCCCGGACAACTGTTGTCTAGCATTCTTGGGTTTT
GCGTTAAGATATATGTAATCAGCATATGATTTTAATCATGAAACCTCAAG
AAATATCCGATATATTTAAACATATAATTTGTTTTCTATAATTATTTACC
TAATGGTGTCTACTAGAATCTTAAACAGATTTCCCTTTAGTACCTGCAAG
CTGCAAGAAGTGTCCCAGGGAATATTTCAATCAGAGTAAAGGATGCAAGG
TAAGTCTGATTTGTTGAACTAATGCATACCGCGAGACGAATAGTGTTGAT
CGATTAGTGTGTAGTTGCAACACAGTCATTACGTAAATGGTAACTGTCCA
GAACATTTAAGTAGGATCAAGATAATTAATTAGTATATCAAATGTTTTGT
TTATAGCATTTTCCTGCATTTTGGAGCACTATGCGAGACTGTGGGCTATA
CAACTTATTATTATGTAATCTTATACCAAGTGTTATTGTATTATTAAAGG
GATTTGTAAATTATCTGATTATTGGTAAACGCGTCAATTATCTTTGAATT
TTCTGTACATATTGGACTTTTTGTCCAGAAGTGTTCCTTAATTTGCCATA
GACATTAACATCGATATTACACTTGTTCCGTAGACATATTCATTTATTAT
CTTATCCATTGGAATGAATGTGCAGATAGGTATAGTTTGATTTGGATTTA
AAATGTCCTGATTCTATTTGTTGCAGACCAGGAAGTATTATCACAAGTCA
AAACATTAACGTCCAGGGTTCTGTGCTTCAAGATCAGGACCTTTACTACA
GTATCTCCAATGCCCTCAGGACAGCTGTGCAGACACCCAGCTCTCTTGGG
GTGGATCCAAACAATGTGACACTTTCAGTGCAA Coding sequence (CDS) from alignment at Sc0000473:119437..123369+ >transcript:BL96098_evm1 ID=transcript:BL96098_evm1|Name=transcript:BL96098_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=5397bp|location=Sequence derived from alignment at Sc0000473:119437..123369+ (Branchiostoma lanceolatum)
TTACCAACAGGGATGACAATGTTCCCGACAATGACGATACCAGAAGCCCT
ATCTGTAAATGAGTGCGCAGAAGGGACCCACAACTGCAGCGTTTATGCCT
CCTGCACTGACACACCCAATAGCTACATATGTGACTGTATATCAGGCTAC
AGCGGCGACGGGGTTAGCTGTATCCTAAAAGTTCCACCTAAGGTCAACAT
ACGTCCCTCGCAGATTCAGAACCTGGTAGTGAGAGAAACGATCACAATTA
CATGCAACGCAACAAGATTTCCTGATGATTTTAGCTACCTGTGGACTGTG
GATGAAACAGCTATACCAAATCAGAGCGGCCCTGTCTTCAGATCTGAATT
TGCAAGTGGTGTTCACCAGGTCAAGTGCATCGTGAGTAGTTCAGGTGGTG
AGATGGAGTCCGCTGATTGCACTGTGACGGTTCTCCCAGAAGATACCATG
ACGTTTGTCTCTAGCATCAGGATAACCGCCAGGAATTTCACTCCAGAGAT
GGCAGATTCTAATTCAGCTGCTTTCCAGAGTATCAGCGCAGAGGTCAAGA
ACTGGTACCTGCAAGCTGCAAGAAGTGTCCCAGGGAATATTTCAATCAGA
GTAAAGGATGCAAGACCAGGAAGTATTATCACAAGTCAAAACATTAACGT
CCAGGGTTCTGTGCTTCAAGATCAGGACCTTTACTACAGTATCTCCAATG
CCCTCAGGACAGCTGTGCAGACACCCAGCTCTCTTGGGGTGGATCCAAAC
AATGTGACACTTTCAGTGCAATTACCAACAGGGATGACAATGTTCCCGAC
AATGACGATACCAGAAGCCCTATCTGTAAATGAGTGCGCAGAAGGGACCC
ACAACTGCAGCGTTTATGCCTCCTGCACTGACACACCCAATAGCTACATA
TGTGACTGTATATCAGGCTACAGCGGCGACGGGGTTAGCTGTATCCTAAA
AGTTCCACCTAAGGTCAACATACGTCCCTCGCAGATTCAGAACCTGGTAG
TGAGAGAAACGATCACAATTACATGCAACGCAACAAGATTTCCTGATGAT
TTTAGCTACCTGTGGACTGTGGATGAAACAGCTATACCAAATCAGAGCGG
CCCTGTCTTCAGATCTGAATTTGCAAGTGGTGTTCACCAGGTCAAGTGCA
TCGTGAGTAGTTCAGGTGGTGAGATGGAGTCCGCTGATTGCACTGTGACG
GTTCTCCCAGAAGATACCATGACGTTTGTCTCTAGCATCAGGATAACCGC
CAGGAATTTCACTCCAGAGATGGCAGATTCTAATTCAGCTGCTTTCCAGA
GTATCAGCGCAGAGGTCAAGAACTGGTACCTGCAAGCTGCAAGAAGTGTC
CCAGGGAATATTTCAATCAGAGTAAAGGATGCAAGACCAGGAAGTATTAT
CACAAGTCAAAACATTAACGTCCAGGGTTCTGTGCTTCAAGATCAGGACC
TTTACTACAGTATCTCCAATGCCCTCAGGACAGCTGTGCAGACACCCAGC
TCTCTTGGGGTGGATCCAAACAATGTGACACTTTCAGTGCAATTACCAAC
AGGGATGACAATGTTCCCGACAATGACGATACCAGAAGCCCTATCTGTAA
ATGAGTGCGCAGAAGGGACCCACAACTGCAGCGTTTATGCCTCCTGCACT
GACACACCCAATAGCTACATATGTGACTGTATATCAGGCTACAGCGGCGA
CGGGGTTAGCTGTATCCTAAAAGTTCCACCTAAGGTCAACATACGTCCCT
CGCAGATTCAGAACCTGGTAGTGAGAGAAACGATCACAATTACATGCAAC
GCAACAAGATTTCCTGATGATTTTAGCTACCTGTGGACTGTGGATGAAAC
AGCTATACCAAATCAGAGCGGCCCTGTCTTCAGATCTGAATTTGCAAGTG
GTGTTCACCAGGTCAAGTGCATCGTGAGTAGTTCAGGTGGTGAGATGGAG
TCCGCTGATTGCACTGTGACGGTTCTCCCAGAAGATACCATGACGTTTGT
CTCTAGCATCAGGATAACCGCCAGGAATTTCACTCCAGAGATGGCAGATT
CTAATTCAGCTGCTTTCCAGAGTATCAGCGCAGAGGTCAAGAACTGGTAC
CTGCAAGCTGCAAGAAGTGTCCCAGGGAATATTTCAATCAGAGTAAAGGA
TGCAAGACCAGGAAGTATTATCACAAGTCAAAACATTAACGTCCAGGGTT
CTGTGCTTCAAGATCAGGACCTTTACTACAGTATCTCCAATGCCCTCAGG
ACAGCTGTGCAGACACCCAGCTCTCTTGGGGTGGATCCAAACAATGTGAC
ACTTTCAGTGCAATTACCAACAGGGATGACAATGTTCCCGACAATGACGA
TACCAGAAGCCCTATCTGTAAATGAGTGCGCAGAAGGGACCCACAACTGC
AGCGTTTATGCCTCCTGCACTGACACACCCAATAGCTACATATGTGACTG
TATATCAGGCTACAGCGGCGACGGGGTTAGCTGTATCCTAAAAGTTCCAC
CTAAGGTCAACATACGTCCCTCGCAGATTCAGAACCTGGTAGTGAGAGAA
ACGATCACAATTACATGCAACGCAACAAGATTTCCTGATGATTTTAGCTA
CCTGTGGACTGTGGATGAAACAGCTATACCAAATCAGAGCGGCCCTGTCT
TCAGATCTGAATTTGCAAGTGGTGTTCACCAGGTCAAGTGCATCGTGAGT
AGTTCAGGTGGTGAGATGGAGTCCGCTGATTGCACTGTGACGGTTCTCCC
AGAAGATACCATGACGTTTGTCTCTAGCATCAGGATAACCGCCAGGAATT
TCACTCCAGAGATGGCAGATTCTAATTCAGCTGCTTTCCAGAGTATCAGC
GCAGAGGTCAAGAACTGGTACCTGCAAGCTGCAAGAAGTGTCCCAGGGAA
TATTTCAATCAGAGTAAAGGATGCAAGACCAGGAAGTATTATCACAAGTC
AAAACATTAACGTCCAGGGTTCTGTGCTTCAAGATCAGGACCTTTACTAC
AGTATCTCCAATGCCCTCAGGACAGCTGTGCAGACACCCAGCTCTCTTGG
GGTGGATCCAAACAATGTGACACTTTCAGTGCAATTACCAACAGGGATGA
CAATGTTCCCGACAATGACGATACCAGAAGCCCTATCTGTAAATGAGTGC
GCAGAAGGGACCCACAACTGCAGCGTTTATGCCTCCTGCACTGACACACC
CAATAGCTACATATGTGACTGTATATCAGGCTACAGCGGCGACGGGGTTA
GCTGTATCCTAAAAGTTCCACCTAAGGTCAACATACGTCCCTCGCAGATT
CAGAACCTGGTAGTGAGAGAAACGATCACAATTACATGCAACGCAACAAG
ATTTCCTGATGATTTTAGCTACCTGTGGACTGTGGATGAAACAGCTATAC
CAAATCAGAGCGGCCCTGTCTTCAGATCTGAATTTGCAAGTGGTGTTCAC
CAGGTCAAGTGCATCGTGAGTAGTTCAGGTGGTGAGATGGAGTCCGCTGA
TTGCACTGTGACGGTTCTCCCAGAAGATACCATGACGTTTGTCTCTAGCA
TCAGGATAACCGCCAGGAATTTCACTCCAGAGATGGCAGATTCTAATTCA
GCTGCTTTCCAGAGTATCAGCGCAGAGGTCAAGAACTGGTACCTGCAAGC
TGCAAGAAGTGTCCCAGGGAATATTTCAATCAGAGTAAAGGATGCAAGAC
CAGGAAGTATTATCACAAGTCAAAACATTAACGTCCAGGGTTCTGTGCTT
CAAGATCAGGACCTTTACTACAGTATCTCCAATGCCCTCAGGACAGCTGT
GCAGACACCCAGCTCTCTTGGGGTGGATCCAAACAATGTGACACTTTCAG
TGCAATTACCAACAGGGATGACAATGTTCCCGACAATGACGATACCAGAA
GCCCTATCTGTAAATGAGTGCGCAGAAGGGACCCACAACTGCAGCGTTTA
TGCCTCCTGCACTGACACACCCAATAGCTACATATGTGACTGTATATCAG
GCTACAGCGGCGACGGGGTTAGCTGTATCCTAAAAGTTCCACCTAAGGTC
AACATACGTCCCTCGCAGATTCAGAACCTGGTAGTGAGAGAAACGATCAC
AATTACATGCAACGCAACAAGATTTCCTGATGATTTTAGCTACCTGTGGA
CTGTGGATGAAACAGCTATACCAAATCAGAGCGGCCCTGTCTTCAGATCT
GAATTTGCAAGTGGTGTTCACCAGGTCAAGTGCATCGTGAGTAGTTCAGG
TGGTGAGATGGAGTCCGCTGATTGCACTGTGACGGTTCTCCCAGAAGATA
CCATGACGTTTGTCTCTAGCATCAGGATAACCGCCAGGAATTTCACTCCA
GAGATGGCAGATTCTAATTCAGCTGCTTTCCAGAGTATCAGCGCAGAGGT
CAAGAACTGGTACCTGCAAGCTGCAAGAAGTGTCCCAGGGAATATTTCAA
TCAGAGTAAAGGATGCAAGACCAGGAAGTATTATCACAAGTCAAAACATT
AACGTCCAGGGTTCTGTGCTTCAAGATCAGGACCTTTACTACAGTATCTC
CAATGCCCTCAGGACAGCTGTGCAGACACCCAGCTCTCTTGGGGTGGATC
CAAACAATGTGACACTTTCAGTGCAATTACCAACAGGGATGACAATGTTC
CCGACAATGACGATACCAGAAGCCCTATCTGTAAATGAGTGCGCAGAAGG
GACCCACAACTGCAGCGTTTATGCCTCCTGCACTGACACACCCAATAGCT
ACATATGTGACTGTATATCAGGCTACAGCGGCGACGGGGTTAGCTGTATC
CTAAAAGTTCCACCTAAGGTCAACATACGTCCCTCGCAGATTCAGAACCT
GGTAGTGAGAGAAACGATCACAATTACATGCAACGCAACAAGATTTCCTG
ATGATTTTAGCTACCTGTGGACTGTGGATGAAACAGCTATACCAAATCAG
AGCGGCCCTGTCTTCAGATCTGAATTTGCAAGTGGTGTTCACCAGGTCAA
GTGCATCGTGAGTAGTTCAGGTGGTGAGATGGAGTCCGCTGATTGCACTG
TGACGGTTCTCCCAGAAGATACCATGACGTTTGTCTCTAGCATCAGGATA
ACCGCCAGGAATTTCACTCCAGAGATGGCAGATTCTAATTCAGCTGCTTT
CCAGAGTATCAGCGCAGAGGTCAAGAACTGGTACCTGCAAGCTGCAAGAA
GTGTCCCAGGGAATATTTCAATCAGAGTAAAGGATGCAAGACCAGGAAGT
ATTATCACAAGTCAAAACATTAACGTCCAGGGTTCTGTGCTTCAAGATCA
GGACCTTTACTACAGTATCTCCAATGCCCTCAGGACAGCTGTGCAGACAC
CCAGCTCTCTTGGGGTGGATCCAAACAATGTGACACTTTCAGTGCAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000473 | genome | Sc0000473:119437..123369 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96098_evm1 |
| Biotype | protein_coding |
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