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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96074_evm2 >transcript:BL96074_evm2-protein ID=transcript:BL96074_evm2-protein|Name=transcript:BL96074_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=170bp
MPVVFVNGEVTAVADVMITHPRYPVTDMLMTSEPPGSPVKNLVLAMLAAY
PHQRPTSQQVLGTLRQITGSSDRTNIQAVPPRPSYTVVEVPGEDAEAESC
KYDCISCCTGCWKWEKGYTWYSCDGKGWGWVILLSIMWLFVLALFIFLCL
MGKGDKAARLVDCKTGSEDQ Run BLAST on NCBI mRNA from alignment at Sc0000398:34158..36070- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96074_evm2 ID=transcript:BL96074_evm2|Name=transcript:BL96074_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=1913bp|location=Sequence derived from alignment at Sc0000398:34158..36070- (Branchiostoma lanceolatum)
ATGCCTGTCGTTTTCGTCAATGGGGAAGTCACAGCTGTGGCTGACGTCAT
GATCACACACCCAAGATACCCGGTGACAGACATGCTTATGACAAGTGAAC
CGCCGGGATCTCCTGTGAAGGTGTGTAACAAAAGAGACGATGATCTTAGG
TGGATGGGTTGGGAATGGGAAGGAAAGTATGATTCAGAATCTGATGTTTT
AAGTTCCATGAAAACATACCTACGGCAATTTACGATGTTGGACAGTTAAT
TACAAAATATACTGTTTCAAATGTTTCAGTGAGTCTGTGTCGGCGCATAC
TAGGTTAGCGAAAAGGAGAAAGTGAACCCTACAGGAGTTTGGCGCAGTCA
GTGAAGACCCAGACACTGATAAACTCTATTTCCTCTCAGAACCTGGTCCT
GGCCATGCTGGCAGCTTATCCTCACCAGAGACCAACATCACAGCAGGTCC
TCGGCACCCTCAGACAGATCACTGGCTCTTCTGACAGGTAAGACCTGACA
TCTTGTACTATGTGTAGATACCTGTTTTACGTCCGGGATTTCGCTGTTGC
TAATATTTTGCAATTGTCGTATTGAGGTCACCTGCGCGCCGAATGGCAGT
CGCTACAGACCCTTGCGATCTAGCCCCGCCAAATCATGCAAATGTGCGCT
CCTCACAATTCAGCCCCTGGCTGCGAAGAAAGAGTATTCGGCCTACCCAA
TGATAATAAGAAAAAAAAAGTTGCTGCCACAGCTGATGTTTCAGAAATGC
GAAAAGAAATTGAAAAAGCTGTTAGGTTACCGTTTTGAACCAGGAGGTTG
TGAAAAGAAAGGGTTTGTACCATATTTCACCATTGGTCTGTTAGTTCTAA
TGATTTTCCTATGAATTAATCTTGCAGGACCAATATTCAAGCAGTGCCAC
CACGCCCTTCATACACTGTAGTTGAGGTCCCAGGTGAGGATGCAGAAGCC
GAGTCGTGCAAATATGAGTAAGTAGCCCTCTGACGGACTGAAAGACAACC
CAAACACCTGCTTATCCCCAGAAGCACTTACCATCTGCAACATTTCTTAC
GCTAGTTCCTTACCTAGTCAAATTAACGAAGCAAAATGTTCGCAGAAGTT
GTGCACGCACAACACCAGAACAGCCCTGGACTATCAAACCGAACAATCTT
GAAATACAATTCAACGTGATAAACCTTAAACAGACTTTTAGCTATTGAAT
GCTTTGGTAAAAAAAGCCCCTCACACACATTCGGGGCCTTCCCACGACCT
TGCCCACGACCACTCGCAATGTTAGATCGGCTTTGAGTTGGGATTGGTCG
AACCGGCCCAGTACTATGATTAGGCTGTGGTAAGCCTAAGGACTGGCTCC
CAACCATGGTCTGGAGAATGTTGGGTGTGGTAGGGAGGCCATGGCTGGTT
ACGTGTGAACGTCATGTGCAAATTACCAGAAGAGAAACCTTTGATGCTAT
CTTTATCTCTATATAAAATCATCTAGAGGACTGTTTGGGCACAAATTTAT
TTGTCCTTGGCCATGCAATAACGAGTGTAGAAGAAATGTCGTAAGTTGCG
CACAACCATGTGATTTACAATATATCACATTCAGATTAGTAGAATAAGGT
GTTAAGTTATATCTATCTGTTGTGCATGTAAAATCATGTGCAATTCATTA
ATCTATTCGTTACAATTGTGATAATTGTTTATTTATTTTTGATCCTAAAC
ACCTACAGTTGTATCAGCTGCTGTACGGGGTGCTGGAAGTGGGAGAAGGG
TTACACGTGGTACAGCTGTGATGGGAAAGGTTGGGGATGGGTCATCCTGC
TGTCGATCATGTGGCTCTTTGTCCTGGCTCTCTTCATATTCCTGTGCCTA
ATGGGCAAAGGAGACAAGGCTGCACGCCTCGTAGACTGCAAGACAGGCAG
TGAAGATCAGTGA Coding sequence (CDS) from alignment at Sc0000398:34158..36070- >transcript:BL96074_evm2 ID=transcript:BL96074_evm2|Name=transcript:BL96074_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=2052bp|location=Sequence derived from alignment at Sc0000398:34158..36070- (Branchiostoma lanceolatum)
ATGCCTGTCGTTTTCGTCAATGGGGAAGTCACAGCTGTGGCTGACGTCAT
GATCACACACCCAAGATACCCGGTGACAGACATGCTTATGACAAGTGAAC
CGCCGGGATCTCCTGTGAAGAACCTGGTCCTGGCCATGCTGGCAGCTTAT
CCTCACCAGAGACCAACATCACAGCAGGTCCTCGGCACCCTCAGACAGAT
CACTGGCTCTTCTGACAGGACCAATATTCAAGCAGTGCCACCACGCCCTT
CATACACTGTAGTTGAGGTCCCAGGTGAGGATGCAGAAGCCGAGTCGTGC
AAATATGATTGTATCAGCTGCTGTACGGGGTGCTGGAAGTGGGAGAAGGG
TTACACGTGGTACAGCTGTGATGGGAAAGGTTGGGGATGGGTCATCCTGC
TGTCGATCATGTGGCTCTTTGTCCTGGCTCTCTTCATATTCCTGTGCCTA
ATGGGCAAAGGAGACAAGGCTGCACGCCTCGTAGACTGCAAGACAGGCAG
TGAAGATCAGTGAATGCCTGTCGTTTTCGTCAATGGGGAAGTCACAGCTG
TGGCTGACGTCATGATCACACACCCAAGATACCCGGTGACAGACATGCTT
ATGACAAGTGAACCGCCGGGATCTCCTGTGAAGAACCTGGTCCTGGCCAT
GCTGGCAGCTTATCCTCACCAGAGACCAACATCACAGCAGGTCCTCGGCA
CCCTCAGACAGATCACTGGCTCTTCTGACAGGACCAATATTCAAGCAGTG
CCACCACGCCCTTCATACACTGTAGTTGAGGTCCCAGGTGAGGATGCAGA
AGCCGAGTCGTGCAAATATGATTGTATCAGCTGCTGTACGGGGTGCTGGA
AGTGGGAGAAGGGTTACACGTGGTACAGCTGTGATGGGAAAGGTTGGGGA
TGGGTCATCCTGCTGTCGATCATGTGGCTCTTTGTCCTGGCTCTCTTCAT
ATTCCTGTGCCTAATGGGCAAAGGAGACAAGGCTGCACGCCTCGTAGACT
GCAAGACAGGCAGTGAAGATCAGTGAATGCCTGTCGTTTTCGTCAATGGG
GAAGTCACAGCTGTGGCTGACGTCATGATCACACACCCAAGATACCCGGT
GACAGACATGCTTATGACAAGTGAACCGCCGGGATCTCCTGTGAAGAACC
TGGTCCTGGCCATGCTGGCAGCTTATCCTCACCAGAGACCAACATCACAG
CAGGTCCTCGGCACCCTCAGACAGATCACTGGCTCTTCTGACAGGACCAA
TATTCAAGCAGTGCCACCACGCCCTTCATACACTGTAGTTGAGGTCCCAG
GTGAGGATGCAGAAGCCGAGTCGTGCAAATATGATTGTATCAGCTGCTGT
ACGGGGTGCTGGAAGTGGGAGAAGGGTTACACGTGGTACAGCTGTGATGG
GAAAGGTTGGGGATGGGTCATCCTGCTGTCGATCATGTGGCTCTTTGTCC
TGGCTCTCTTCATATTCCTGTGCCTAATGGGCAAAGGAGACAAGGCTGCA
CGCCTCGTAGACTGCAAGACAGGCAGTGAAGATCAGTGAATGCCTGTCGT
TTTCGTCAATGGGGAAGTCACAGCTGTGGCTGACGTCATGATCACACACC
CAAGATACCCGGTGACAGACATGCTTATGACAAGTGAACCGCCGGGATCT
CCTGTGAAGAACCTGGTCCTGGCCATGCTGGCAGCTTATCCTCACCAGAG
ACCAACATCACAGCAGGTCCTCGGCACCCTCAGACAGATCACTGGCTCTT
CTGACAGGACCAATATTCAAGCAGTGCCACCACGCCCTTCATACACTGTA
GTTGAGGTCCCAGGTGAGGATGCAGAAGCCGAGTCGTGCAAATATGATTG
TATCAGCTGCTGTACGGGGTGCTGGAAGTGGGAGAAGGGTTACACGTGGT
ACAGCTGTGATGGGAAAGGTTGGGGATGGGTCATCCTGCTGTCGATCATG
TGGCTCTTTGTCCTGGCTCTCTTCATATTCCTGTGCCTAATGGGCAAAGG
AGACAAGGCTGCACGCCTCGTAGACTGCAAGACAGGCAGTGAAGATCAGT
GA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000398 | genome | Sc0000398:34158..36070 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96074_evm2 |
| Biotype | protein_coding |
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