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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96054_evm1 >transcript:BL96054_evm1-protein ID=transcript:BL96054_evm1-protein|Name=transcript:BL96054_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=305bp
MAFHTMLPAIFSLVFLLASAAEGRSLTGCLFSDGRVYPPGEFSPARCTRC
TCMTTQVSPGRNTYLPICVSTCDTDARDAVTIPTTTTTTPMLPCSDYLRF
TCPHLNCPDAIPHDYDNCRCGYCPNGPLTTVPTTLQTTAPTTTGHHHHSS
GNSAGETVTISTRATTPVGAPWKNTVTTTTIPTTITTPETTTTVWQYCTC
CNQAAVLTHGPCPTCQCTTTTPGHYGCWHTGWKFTCPYYKPCVDATPDDY
ANCRCGQCPNGPNCYAWDGSIIPAGEAVEVDGATCQCRQGNNSQYADCRW
GVISG Run BLAST on NCBI mRNA from alignment at Sc0000358:37415..40253- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96054_evm1 ID=transcript:BL96054_evm1|Name=transcript:BL96054_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2839bp|location=Sequence derived from alignment at Sc0000358:37415..40253- (Branchiostoma lanceolatum)
ATGGCCTTCCACACGATGCTGCCCGCCATTTTCTCCCTCGTGTTTCTCCT
GGCCAGCGCTGCCGAAGGTAGGAGCCTGACCGGCTGTCTGTTCTCAGACG
GACGGGTGTATCCTCCCGGGGAGTTCAGCCCAGCCAGGTGTACCCGCTGC
ACCTGTATGACGACACAGGTGTCCCCAGGACGAAACACGTACCTTCCCAT
ATGTGTGAGCACCTGCGACACCGATGGTACGTTTGTCACAGTTATTTTTA
TATTTCCTTGTAACATGTCCAAGCTAGGGCCCACGGAACCAGGATGCCAA
TACTATATCTTTAATATGTACACGTGAAAAGGGAAAAGGAAGCAGGATGC
TAGCGCTAGTAACAAGCAACTATGGACCTCCATGACAATTCCTTTTATTG
AAAACTTCAAGATGTGCTAGAAAACCGCTCGTTATCCCTTGCAGCAAGGG
ACGCAGTGACCATCCCCACTACCACCACCACCACGCCGATGCTTCCCTGT
AGCGACTACCTGAGGTTCACCTGTCCTCATCTGAACTGTCCGGACGCCAT
ACCTCACGACTATGACAACTGTCGATGTGGCTACTGTCCCAACGGTACGG
CAACACATTCTTTAATATAAATTCGCTGCTGTAAAAGAAATGTAACACTT
CTAGAGTCAGTTTGTTAACGTTATAACGTTACGTATTTCAAAAGATAAGT
CAGTTCCTGTATCCGCATTTGATAACTGAGAAACGTATCTCTGGAGGTCA
ATGCTTTGCTCGATTCGATATCCTGATATTTATCCTGGCACCAACAGTTC
ATGTTGAAGCATTGTCTGAAGACTTACCGTTCCATATACAATTGCCATAA
CGTGTTATGATTGTTTCCAGGTCCTTTAACGACCGTTCCGACAACCCTAC
AAACCACAGCCCCAACCACGACCGGTCATCATCATCATTCTTCCGGAAAC
TCCGGTGAGATACAATCAATAAAGTTTTTCCAGTGCGATCTGTCCTTCAT
GGCGGATAATAATGCAGAACCTGAGAGTCCAGTGTCTCTTTCAATCAATG
TCATCAAAGTAGTGTGAGGCCTTCCAACTCTGCGTTTTCCCTCGGGTAGC
CACTGCACTAGTCGCCCAGCAGGCTCGTCACTGCGAACAACATGCCCCGC
CAGGGCAAGTCGGCGTCGTCGCACTACTGACGAAATGGGTGGCAGAGAGC
CATAGAGTTGCTCATTTGTTAGATGGCTTCTCCATGATACATTGTATACC
ATTCTTAACATTCGTGTGTAGGTACCGTCCAGTTTCTTACTCTGGGCTGC
AATCATGGCCCATGACTCAGAGCTGTAAAGTAGGATGGTCTCGGTACAGG
CTTTAAACACGCTTTTCACGACCGGTACAGCACCATATTCTTTTAACTTT
AGTAACGTTTTTCTGCTGCCCAAGTATAGAACAAACGTGACACTGACAGA
CTGCTTACTGAAACCTAGATCTTTTTGCTCGCTTTAAAGAAAGGCATAGA
ATGTATTGGGAGGAAGGGAATGGGTCCTCGTGGCGTTTCATTTCAGGACT
TTAATCAATGTTTTATACCTTGCAGCAGGGGAGACAGTGACAATTTCCAC
AAGGGCCACTACCCCTGTGGGTGCACCCTGGAAAAATACTGTCACTACCA
CTACCATTCCCACTACCATAACAACACCAGAAACAACAACAACCGTTTGG
CAATATTGCACGTGCTGCAATCAGGCTGCCGTCTTGACCCACGGCCCGTG
CCCTACCTGTCAATGTAGGTGTTTGTAAAAATCTAACCTGATTTAATCGC
GCTTATAGCAGCCGCCCGTAACCGGACATAAAACCCCGTACAGCTGGAGT
TGCGTTGCGACTAGTAAAAGTCATATTGGCTTATTAGTTTCAGCTATCCT
CAAGTGGTAACGAAATTTACCTTCTTGGATTCTTTACTCGATTTAATAGT
ACAGTAATGTACATGTATGTTGAGTGAGATGTTAGCTGCCGTATATCCTG
GCACCGGCAGCTCATACAGTGAAATGCTAACGTTTGAAGAGTCACCGTTG
TACATTCCGTCGCCAGAACATGTCGTGATTGTAGGTGATTGTTTCCAGGT
ACCACCATGCAGACAATTACAATATCACCATACCATACCACGACCACTCC
AGGCACCACCACCACTCCGGGTCACTACGGCTGCTGGCACACCGGCTGGA
AGTTCACCTGTCCCTACTACAAGCCTTGTGTGGACGCGACACCGGACGAC
TACGCCAACTGCAGATGTGGGCAGTGTCCAAACGGTACTACAAAAGAAAC
CTGCTAAACTTAAATCTTTGAAGTAATAATGAACTATACTAGGCATTTGA
ATCATGTACGTTGTGGATATCAAACAAGGTGTGCCGCATATGTTGAGTAT
TAGTGTCCGTGGTAACTAACGAATCCATTAAGCGGTAGGGTTAATCGGAG
TTACTCATAATTCAGACATTCTCACGGATCATCGTTGCGAACATTATTTC
GTTGCTATCATTCTTGCGTGCACCAATTTCTTGGTATCTCCTGTTTGACA
GGTACGGTAGTGTATAGACATGTGGATATCTGTACTTGTAGTACACTAGA
TTAAATCCAAATATAGCATTATCAAGAAGATTCAACACATTTGATTCAAG
ATACTGTGTTGTCTTTTTCCATATGAATTGGCTCCATGCTTTTTCCTCAC
AGGACCAAACTGTTACGCCTGGGACGGATCCATTATCCCTGCAGGGGAGG
CTGTGGAGGTGGACGGTGCCACTTGTCAGTGCCGACAAGGGAACAACTCA
CAGTATGCAGACTGCAGATGGGGCGTCATCTCTGGCTGA Coding sequence (CDS) from alignment at Sc0000358:37415..40253- >transcript:BL96054_evm1 ID=transcript:BL96054_evm1|Name=transcript:BL96054_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=5508bp|location=Sequence derived from alignment at Sc0000358:37415..40253- (Branchiostoma lanceolatum)
ATGGCCTTCCACACGATGCTGCCCGCCATTTTCTCCCTCGTGTTTCTCCT
GGCCAGCGCTGCCGAAGGTAGGAGCCTGACCGGCTGTCTGTTCTCAGACG
GACGGGTGTATCCTCCCGGGGAGTTCAGCCCAGCCAGGTGTACCCGCTGC
ACCTGTATGACGACACAGGTGTCCCCAGGACGAAACACGTACCTTCCCAT
ATGTGTGAGCACCTGCGACACCGATGCAAGGGACGCAGTGACCATCCCCA
CTACCACCACCACCACGCCGATGCTTCCCTGTAGCGACTACCTGAGGTTC
ACCTGTCCTCATCTGAACTGTCCGGACGCCATACCTCACGACTATGACAA
CTGTCGATGTGGCTACTGTCCCAACGGTCCTTTAACGACCGTTCCGACAA
CCCTACAAACCACAGCCCCAACCACGACCGGTCATCATCATCATTCTTCC
GGAAACTCCGCAGGGGAGACAGTGACAATTTCCACAAGGGCCACTACCCC
TGTGGGTGCACCCTGGAAAAATACTGTCACTACCACTACCATTCCCACTA
CCATAACAACACCAGAAACAACAACAACCGTTTGGCAATATTGCACGTGC
TGCAATCAGGCTGCCGTCTTGACCCACGGCCCGTGCCCTACCTGTCAATG
CACCACCACCACTCCGGGTCACTACGGCTGCTGGCACACCGGCTGGAAGT
TCACCTGTCCCTACTACAAGCCTTGTGTGGACGCGACACCGGACGACTAC
GCCAACTGCAGATGTGGGCAGTGTCCAAACGGACCAAACTGTTACGCCTG
GGACGGATCCATTATCCCTGCAGGGGAGGCTGTGGAGGTGGACGGTGCCA
CTTGTCAGTGCCGACAAGGGAACAACTCACAGTATGCAGACTGCAGATGG
GGCGTCATCTCTGGCTGAATGGCCTTCCACACGATGCTGCCCGCCATTTT
CTCCCTCGTGTTTCTCCTGGCCAGCGCTGCCGAAGGTAGGAGCCTGACCG
GCTGTCTGTTCTCAGACGGACGGGTGTATCCTCCCGGGGAGTTCAGCCCA
GCCAGGTGTACCCGCTGCACCTGTATGACGACACAGGTGTCCCCAGGACG
AAACACGTACCTTCCCATATGTGTGAGCACCTGCGACACCGATGCAAGGG
ACGCAGTGACCATCCCCACTACCACCACCACCACGCCGATGCTTCCCTGT
AGCGACTACCTGAGGTTCACCTGTCCTCATCTGAACTGTCCGGACGCCAT
ACCTCACGACTATGACAACTGTCGATGTGGCTACTGTCCCAACGGTCCTT
TAACGACCGTTCCGACAACCCTACAAACCACAGCCCCAACCACGACCGGT
CATCATCATCATTCTTCCGGAAACTCCGCAGGGGAGACAGTGACAATTTC
CACAAGGGCCACTACCCCTGTGGGTGCACCCTGGAAAAATACTGTCACTA
CCACTACCATTCCCACTACCATAACAACACCAGAAACAACAACAACCGTT
TGGCAATATTGCACGTGCTGCAATCAGGCTGCCGTCTTGACCCACGGCCC
GTGCCCTACCTGTCAATGCACCACCACCACTCCGGGTCACTACGGCTGCT
GGCACACCGGCTGGAAGTTCACCTGTCCCTACTACAAGCCTTGTGTGGAC
GCGACACCGGACGACTACGCCAACTGCAGATGTGGGCAGTGTCCAAACGG
ACCAAACTGTTACGCCTGGGACGGATCCATTATCCCTGCAGGGGAGGCTG
TGGAGGTGGACGGTGCCACTTGTCAGTGCCGACAAGGGAACAACTCACAG
TATGCAGACTGCAGATGGGGCGTCATCTCTGGCTGAATGGCCTTCCACAC
GATGCTGCCCGCCATTTTCTCCCTCGTGTTTCTCCTGGCCAGCGCTGCCG
AAGGTAGGAGCCTGACCGGCTGTCTGTTCTCAGACGGACGGGTGTATCCT
CCCGGGGAGTTCAGCCCAGCCAGGTGTACCCGCTGCACCTGTATGACGAC
ACAGGTGTCCCCAGGACGAAACACGTACCTTCCCATATGTGTGAGCACCT
GCGACACCGATGCAAGGGACGCAGTGACCATCCCCACTACCACCACCACC
ACGCCGATGCTTCCCTGTAGCGACTACCTGAGGTTCACCTGTCCTCATCT
GAACTGTCCGGACGCCATACCTCACGACTATGACAACTGTCGATGTGGCT
ACTGTCCCAACGGTCCTTTAACGACCGTTCCGACAACCCTACAAACCACA
GCCCCAACCACGACCGGTCATCATCATCATTCTTCCGGAAACTCCGCAGG
GGAGACAGTGACAATTTCCACAAGGGCCACTACCCCTGTGGGTGCACCCT
GGAAAAATACTGTCACTACCACTACCATTCCCACTACCATAACAACACCA
GAAACAACAACAACCGTTTGGCAATATTGCACGTGCTGCAATCAGGCTGC
CGTCTTGACCCACGGCCCGTGCCCTACCTGTCAATGCACCACCACCACTC
CGGGTCACTACGGCTGCTGGCACACCGGCTGGAAGTTCACCTGTCCCTAC
TACAAGCCTTGTGTGGACGCGACACCGGACGACTACGCCAACTGCAGATG
TGGGCAGTGTCCAAACGGACCAAACTGTTACGCCTGGGACGGATCCATTA
TCCCTGCAGGGGAGGCTGTGGAGGTGGACGGTGCCACTTGTCAGTGCCGA
CAAGGGAACAACTCACAGTATGCAGACTGCAGATGGGGCGTCATCTCTGG
CTGAATGGCCTTCCACACGATGCTGCCCGCCATTTTCTCCCTCGTGTTTC
TCCTGGCCAGCGCTGCCGAAGGTAGGAGCCTGACCGGCTGTCTGTTCTCA
GACGGACGGGTGTATCCTCCCGGGGAGTTCAGCCCAGCCAGGTGTACCCG
CTGCACCTGTATGACGACACAGGTGTCCCCAGGACGAAACACGTACCTTC
CCATATGTGTGAGCACCTGCGACACCGATGCAAGGGACGCAGTGACCATC
CCCACTACCACCACCACCACGCCGATGCTTCCCTGTAGCGACTACCTGAG
GTTCACCTGTCCTCATCTGAACTGTCCGGACGCCATACCTCACGACTATG
ACAACTGTCGATGTGGCTACTGTCCCAACGGTCCTTTAACGACCGTTCCG
ACAACCCTACAAACCACAGCCCCAACCACGACCGGTCATCATCATCATTC
TTCCGGAAACTCCGCAGGGGAGACAGTGACAATTTCCACAAGGGCCACTA
CCCCTGTGGGTGCACCCTGGAAAAATACTGTCACTACCACTACCATTCCC
ACTACCATAACAACACCAGAAACAACAACAACCGTTTGGCAATATTGCAC
GTGCTGCAATCAGGCTGCCGTCTTGACCCACGGCCCGTGCCCTACCTGTC
AATGCACCACCACCACTCCGGGTCACTACGGCTGCTGGCACACCGGCTGG
AAGTTCACCTGTCCCTACTACAAGCCTTGTGTGGACGCGACACCGGACGA
CTACGCCAACTGCAGATGTGGGCAGTGTCCAAACGGACCAAACTGTTACG
CCTGGGACGGATCCATTATCCCTGCAGGGGAGGCTGTGGAGGTGGACGGT
GCCACTTGTCAGTGCCGACAAGGGAACAACTCACAGTATGCAGACTGCAG
ATGGGGCGTCATCTCTGGCTGAATGGCCTTCCACACGATGCTGCCCGCCA
TTTTCTCCCTCGTGTTTCTCCTGGCCAGCGCTGCCGAAGGTAGGAGCCTG
ACCGGCTGTCTGTTCTCAGACGGACGGGTGTATCCTCCCGGGGAGTTCAG
CCCAGCCAGGTGTACCCGCTGCACCTGTATGACGACACAGGTGTCCCCAG
GACGAAACACGTACCTTCCCATATGTGTGAGCACCTGCGACACCGATGCA
AGGGACGCAGTGACCATCCCCACTACCACCACCACCACGCCGATGCTTCC
CTGTAGCGACTACCTGAGGTTCACCTGTCCTCATCTGAACTGTCCGGACG
CCATACCTCACGACTATGACAACTGTCGATGTGGCTACTGTCCCAACGGT
CCTTTAACGACCGTTCCGACAACCCTACAAACCACAGCCCCAACCACGAC
CGGTCATCATCATCATTCTTCCGGAAACTCCGCAGGGGAGACAGTGACAA
TTTCCACAAGGGCCACTACCCCTGTGGGTGCACCCTGGAAAAATACTGTC
ACTACCACTACCATTCCCACTACCATAACAACACCAGAAACAACAACAAC
CGTTTGGCAATATTGCACGTGCTGCAATCAGGCTGCCGTCTTGACCCACG
GCCCGTGCCCTACCTGTCAATGCACCACCACCACTCCGGGTCACTACGGC
TGCTGGCACACCGGCTGGAAGTTCACCTGTCCCTACTACAAGCCTTGTGT
GGACGCGACACCGGACGACTACGCCAACTGCAGATGTGGGCAGTGTCCAA
ACGGACCAAACTGTTACGCCTGGGACGGATCCATTATCCCTGCAGGGGAG
GCTGTGGAGGTGGACGGTGCCACTTGTCAGTGCCGACAAGGGAACAACTC
ACAGTATGCAGACTGCAGATGGGGCGTCATCTCTGGCTGAATGGCCTTCC
ACACGATGCTGCCCGCCATTTTCTCCCTCGTGTTTCTCCTGGCCAGCGCT
GCCGAAGGTAGGAGCCTGACCGGCTGTCTGTTCTCAGACGGACGGGTGTA
TCCTCCCGGGGAGTTCAGCCCAGCCAGGTGTACCCGCTGCACCTGTATGA
CGACACAGGTGTCCCCAGGACGAAACACGTACCTTCCCATATGTGTGAGC
ACCTGCGACACCGATGCAAGGGACGCAGTGACCATCCCCACTACCACCAC
CACCACGCCGATGCTTCCCTGTAGCGACTACCTGAGGTTCACCTGTCCTC
ATCTGAACTGTCCGGACGCCATACCTCACGACTATGACAACTGTCGATGT
GGCTACTGTCCCAACGGTCCTTTAACGACCGTTCCGACAACCCTACAAAC
CACAGCCCCAACCACGACCGGTCATCATCATCATTCTTCCGGAAACTCCG
CAGGGGAGACAGTGACAATTTCCACAAGGGCCACTACCCCTGTGGGTGCA
CCCTGGAAAAATACTGTCACTACCACTACCATTCCCACTACCATAACAAC
ACCAGAAACAACAACAACCGTTTGGCAATATTGCACGTGCTGCAATCAGG
CTGCCGTCTTGACCCACGGCCCGTGCCCTACCTGTCAATGCACCACCACC
ACTCCGGGTCACTACGGCTGCTGGCACACCGGCTGGAAGTTCACCTGTCC
CTACTACAAGCCTTGTGTGGACGCGACACCGGACGACTACGCCAACTGCA
GATGTGGGCAGTGTCCAAACGGACCAAACTGTTACGCCTGGGACGGATCC
ATTATCCCTGCAGGGGAGGCTGTGGAGGTGGACGGTGCCACTTGTCAGTG
CCGACAAGGGAACAACTCACAGTATGCAGACTGCAGATGGGGCGTCATCT
CTGGCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000358 | genome | Sc0000358:37415..40253 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96054_evm1 |
| Biotype | protein_coding |
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