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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96004_evm0 >transcript:BL96004_evm0-protein ID=transcript:BL96004_evm0-protein|Name=transcript:BL96004_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=142bp
MGLTSEDKSAVLDSWAKMSGPTFQDAGERVFLLLLKTDSTKALFPKFRDI
PYDKLAGHPDVRDHGGKVMQVLDDFIKGLDTAGDAAVQKVGLLHKGVGVS
HENIDLMKPVLMTLLGEVGCSGAAGAWENLWARFMDVHRTCY Run BLAST on NCBI mRNA from alignment at Sc0000288:289861..291899+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96004_evm0 ID=transcript:BL96004_evm0|Name=transcript:BL96004_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2039bp|location=Sequence derived from alignment at Sc0000288:289861..291899+ (Branchiostoma lanceolatum)
ATGGGTCTTACGTCCGAAGACAAGAGTGCAGTGTTGGATTCCTGGGCCAA
GATGTCTGGTCCCACGTTCCAAGACGCGGGCGAAAGGGTTTTCTTACTGT
AAGTGCACAACCATGCACTTGTCGACTGTCTAGCGCATGCAGTTATAATT
CGTTTGACTTGATTGTGAACTTAACTGGCCTAAGTGAACTGTGAGTTGCT
GTTGTCTTCAGAAATCATTGCAATGGATGTTAGAAGGCAAGCAAATTTGT
ACAGTAATCCCTATAATCAAGGGATCACCTAAGTTAGAAAATGGAAATCA
GATTTCAGCAGGTTTTAGATTGTTCGGAACATTCATAGTGTCTTTCAGTT
CATTCGACGGACGGGACATTGGTGCGCAAACATAAGAGACAATTTCTACA
GCGCATTCTTCCAGGCACTGTTTCGTAGATCCAAAGAAATATAAAGAGCT
CGAGACTATCTCACTAACACACCAATATGCTTCTTTCCTTCATTTGTCAA
TGTTTAGCCTCTTGAAGACCGACTCCACTAAGGCGCTGTTCCCGAAGTTC
CGTGACATTCCTTACGACAAGCTGGCCGGCCATCCCGACGTCCGTGACCA
CGGCGGAAAGGTCTGTTGTCCTTATAAGGCCATGTTGATTCGATTATATG
GATGACATCCACGCGCATCAATTTACGTCCGTTAGAAGAAAAAAAGGTCT
TCGACCATGCTGTAAATCGTACAAAGCAGCTGCAAAATGAGCAAACATAT
GCCTTAAATTGCAGCAAAGATATTGGAAAACGGATACTAATGTCGTTGAA
TGTCAAACTAATTCCAAAGCCAAAGAAGAAGATGTGAAAGAAAAAAAATG
AAGAATCAATTGCTCGGTATATCATACTCTGTGGTTTATTTGTTCAACCT
TCCTGACCACTTATATCTTATATCGAGGGCAACATTTTTTTTCGCCAATT
TCTTTTTCGCACGCTCGCATCAGCTTTTTTGGGGTCCCAGAGGATGTTAT
CTATATAATCGAATCAATATGGCCTAAAATATTCTTACTGTGATGTTTCT
TACTCGATTCCCAGCGCGCTTAACAACGTACATCGATATCGTACATAATT
TGGCTACTACTTGAAAGTCTGTGTCATGACAAGTACATTAATGAACACCT
GCCTCACACCGCATTAATTGATAGAATAGCCATAAAAGCCCAATATCAAT
AGCCTTTCAATCAGGGCGTCTTTTAACGCAAAATCAATGAGCTTGGCGAA
GAATGCGATAAGCTGAGATCAAAGTACAACTGTAAACGGTTGGGTCGCCA
CATCTGTATCTGGGTCTGAATCAGTAGGAAAGTAGTAATTAAATGTACGT
CAATCACCGGTGGATGTTTAATTTCTTTTCGTTAAAGATTGGTAGAAAAT
TATGCTGTCATGGATAGAAGGCCATTCCAATGAATGAAAATTCTTCCCAT
CGTAGTGATGTTAAATCACTCCACTTTGGTTTATGATTAAAACTAGCAAT
AATTTGCACTATTGTATGGCACTTTTGATGCAGCACGGAATATCAATGTT
GTCATACTGCTAGCTGTAAATAGGATAGCATGTTTCTATTGTTAGACATC
AACATGACGTATAACGTATATCTGGTACGTAACAGGTGATGCAGGTACTT
GATGACTTCATCAAAGGCCTGGACACTGCAGGTGACGCCGCCGTCCAGAA
GGTGGGGCTCCTGCACAAAGGCGTGGGCGTGTCTCACGAGAACATCGACG
TGAGTAGACAGCGTGTTTGGGTTCTCCAATCTCTTGCAACTTGATTGTGT
CACGTATCTAACTGAACCCATTCCATTGTTGTTATTTGCCATCTGGAATT
AGTCATTTTAATATGTTCGTAATATTTAAATGTATAAGTAGTGAGTTAGG
TGTTGTTTTCTTCACCTCACACCAGCTGATGAAGCCTGTCCTGATGACCC
TACTCGGAGAGGTGGGGTGCAGCGGTGCCGCGGGAGCCTGGGAGAACCTG
TGGGCCCGCTTCATGGACGTGCACCGCACCTGTTACTGA Coding sequence (CDS) from alignment at Sc0000288:289861..291899+ >transcript:BL96004_evm0 ID=transcript:BL96004_evm0|Name=transcript:BL96004_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1716bp|location=Sequence derived from alignment at Sc0000288:289861..291899+ (Branchiostoma lanceolatum)
ATGGGTCTTACGTCCGAAGACAAGAGTGCAGTGTTGGATTCCTGGGCCAA
GATGTCTGGTCCCACGTTCCAAGACGCGGGCGAAAGGGTTTTCTTACTCC
TCTTGAAGACCGACTCCACTAAGGCGCTGTTCCCGAAGTTCCGTGACATT
CCTTACGACAAGCTGGCCGGCCATCCCGACGTCCGTGACCACGGCGGAAA
GGTGATGCAGGTACTTGATGACTTCATCAAAGGCCTGGACACTGCAGGTG
ACGCCGCCGTCCAGAAGGTGGGGCTCCTGCACAAAGGCGTGGGCGTGTCT
CACGAGAACATCGACCTGATGAAGCCTGTCCTGATGACCCTACTCGGAGA
GGTGGGGTGCAGCGGTGCCGCGGGAGCCTGGGAGAACCTGTGGGCCCGCT
TCATGGACGTGCACCGCACCTGTTACTGAATGGGTCTTACGTCCGAAGAC
AAGAGTGCAGTGTTGGATTCCTGGGCCAAGATGTCTGGTCCCACGTTCCA
AGACGCGGGCGAAAGGGTTTTCTTACTCCTCTTGAAGACCGACTCCACTA
AGGCGCTGTTCCCGAAGTTCCGTGACATTCCTTACGACAAGCTGGCCGGC
CATCCCGACGTCCGTGACCACGGCGGAAAGGTGATGCAGGTACTTGATGA
CTTCATCAAAGGCCTGGACACTGCAGGTGACGCCGCCGTCCAGAAGGTGG
GGCTCCTGCACAAAGGCGTGGGCGTGTCTCACGAGAACATCGACCTGATG
AAGCCTGTCCTGATGACCCTACTCGGAGAGGTGGGGTGCAGCGGTGCCGC
GGGAGCCTGGGAGAACCTGTGGGCCCGCTTCATGGACGTGCACCGCACCT
GTTACTGAATGGGTCTTACGTCCGAAGACAAGAGTGCAGTGTTGGATTCC
TGGGCCAAGATGTCTGGTCCCACGTTCCAAGACGCGGGCGAAAGGGTTTT
CTTACTCCTCTTGAAGACCGACTCCACTAAGGCGCTGTTCCCGAAGTTCC
GTGACATTCCTTACGACAAGCTGGCCGGCCATCCCGACGTCCGTGACCAC
GGCGGAAAGGTGATGCAGGTACTTGATGACTTCATCAAAGGCCTGGACAC
TGCAGGTGACGCCGCCGTCCAGAAGGTGGGGCTCCTGCACAAAGGCGTGG
GCGTGTCTCACGAGAACATCGACCTGATGAAGCCTGTCCTGATGACCCTA
CTCGGAGAGGTGGGGTGCAGCGGTGCCGCGGGAGCCTGGGAGAACCTGTG
GGCCCGCTTCATGGACGTGCACCGCACCTGTTACTGAATGGGTCTTACGT
CCGAAGACAAGAGTGCAGTGTTGGATTCCTGGGCCAAGATGTCTGGTCCC
ACGTTCCAAGACGCGGGCGAAAGGGTTTTCTTACTCCTCTTGAAGACCGA
CTCCACTAAGGCGCTGTTCCCGAAGTTCCGTGACATTCCTTACGACAAGC
TGGCCGGCCATCCCGACGTCCGTGACCACGGCGGAAAGGTGATGCAGGTA
CTTGATGACTTCATCAAAGGCCTGGACACTGCAGGTGACGCCGCCGTCCA
GAAGGTGGGGCTCCTGCACAAAGGCGTGGGCGTGTCTCACGAGAACATCG
ACCTGATGAAGCCTGTCCTGATGACCCTACTCGGAGAGGTGGGGTGCAGC
GGTGCCGCGGGAGCCTGGGAGAACCTGTGGGCCCGCTTCATGGACGTGCA
CCGCACCTGTTACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000288 | genome | Sc0000288:289861..291899 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96004_evm0 |
| Biotype | protein_coding |
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