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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95991_evm1 >transcript:BL95991_evm1-protein ID=transcript:BL95991_evm1-protein|Name=transcript:BL95991_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=524bp
MAIVSKPRCSASLLVFLGFLIRHRSSAEKVLLVPPPFGNSHWITLARIGR
ALVDRGYIVTVVVSEDIVEKRRAEWPDFQFETFQDGGTRATLEAVQDQAH
SVARVLSLFELIEAFASVPEYLKQYCALLLEESNLLDQLRARQYSVVISD
PFFPCGAVLSAHLDSRVPHIAVMRADPYFLDLKATGVPLPLSYVPFISTD
FTDDMTFVKRLQNVVMSTLVPVVGRQSVSSIYDGLVRKYIGKKETIQSVT
SRTDLWLYRTDNVLDHPRPSMPSMVQVGGLNVRAAVPLTEDMEAFVQSSG
DDGVVVVSFGSMVKTMSTARIEIFAAAFARLRQKVVWRYVGEKPTGLGNN
TKLLEWLPQNDLLAHPKTRAFITHAGSNGLYEALHHGVPMVCLPLFGDQP
ANAARVVGRGLGVKLDFSTVTADQLYQAILHVVTNNSYQETAARLSRLHR
DQPQSPMERAVWWIEHVIKHGRLPHLRARAVELPWYQYYLLDVAVFLFGV
CLAVLGTVWCGXPGNGSPPVPPAP Run BLAST on NCBI mRNA from alignment at Sc0000277:13082..15895+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95991_evm1 ID=transcript:BL95991_evm1|Name=transcript:BL95991_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2814bp|location=Sequence derived from alignment at Sc0000277:13082..15895+ (Branchiostoma lanceolatum)
ATGGCAATCGTATCGAAGCCTCGATGTTCCGCCAGTCTGCTAGTTTTCTT
GGGTTTTCTGATCAGACACAGGAGCAGCGCAGAGAAGGTTCTGTTGGTAC
CTCCGCCATTTGGCAACAGCCACTGGATAACTCTGGCCAGAATTGGCCGT
GCTTTGGTGGATAGAGGTTATATCGTCACTGTGGTTGTTTCAGAGGACAT
TGTAGAAAAACGACGAGCAGAGTGGCCTGACTTTCAGTTTGAGACATTCC
AAGACGGAGGAACGCGAGCAACACTCGAGGCAGTTCAAGACCAAGCCCAT
TCTGTGGCTAGAGTATTGTCTCTCTTCGAATTAATTGAAGCATTCGCTTC
TGTGCCAGAGTATCTTAAACAATACTGTGCCCTATTGTTGGAAGAGAGCA
ACCTGTTGGATCAGCTAAGGGCACGTCAGTACAGTGTGGTGATTTCTGAC
CCCTTTTTCCCTTGCGGCGCTGTCCTCTCAGCCCATCTAGACTCCCGGGT
CCCGCACATCGCGGTTATGCGTGCAGATCCTTACTTCCTCGACCTAAAAG
CTACAGGTGTACCGCTGCCGCTGTCGTACGTGCCATTTATATCTACCGAT
TTTACCGATGACATGACCTTTGTAAAACGACTTCAGAACGTTGTCATGTC
TACTCTTGTACCAGTGGTGGGACGTCAGAGTGTGAGCAGCATCTATGACG
GACTTGTCCGCAAGTACATCGGCAAGAAAGAAACAATTCAGAGCGTGACG
TCACGTACGGACTTGTGGCTTTATCGAACGGACAATGTGCTGGATCATCC
TCGTCCCAGCATGCCTAGCATGGTTCAGGTTGGGGGACTGAATGTCCGTG
CGGCCGTCCCACTCACTGAGGTGAATCATCATACTTCCGGATTCGGGTAG
CGAGAAGGAACTGTGGTCATAATATATACTGTACAGACGTTATCTCAACA
TTGGTGTCGCTTGATGTACGAGAAAATTCACCATTCTGTATCAAAGTTAA
ACTGCAATTTCCAACAAAAGAATTTGGACTTATCGAAATTTTCGACTGAT
CAGCTCCAGTTTTTGTCAAGGAATGAGCAATTCACTGTCTCTATGACGCC
ACGTTATGCAGATAGGACACGTGACTCAGAGAGCAGTGGGTCAACGTTGT
AAAAAGTCTATGACGCCCCCCGTCACTGTTAAGGGACGGTTGTAAAGCCC
TGATGTAGATTGCTTCTTTTATTCCTCTTGCAAAAAAGTCCGGCTCTGTG
TCCAATTCTTACTTTGTCCAGTAAGACTGAGTGTCAAGGTGACTGTATAT
GTATGTGTTGTGAAACTTCCAAAGTTATCTTTCCACAGGACATGGAAGCG
TTTGTCCAGAGCTCTGGAGACGATGGGGTGGTTGTGGTCAGCTTCGGGTC
GATGGTGAAGACGATGTCGACGGCGAGGATCGAAATCTTCGCGGCAGCCT
TCGCCCGACTCCGACAGAAGGTGGTGTGGCGGTACGTGGGAGAGAAGCCC
ACCGGTCTGGGCAACAACACCAAGTTGCTTGAATGGCTTCCTCAGAACGA
CTTGCTGGGTAAGATTCTCATTATATTATCAATTAATTTTCAAGTTCTTG
CCCGATGGCTAATTGCAACATGAAACAGTATCAAGAAAAAGGAAAGGACA
GTACTATGCAAGATAACAATGCTAAGTAGTCAAACAAGGTAAGGGACGAT
TCTAATAAGAACTTCTACTGATGTTGTGTTTGTCTTATTATTATATCAAA
AACAAAACGGATATTATATCAAAAACAAAACTGATATTTTGTCTTATTAC
TACAAGACAAAAACTGACAAGTATAATTCAAACAAACCATAGGGAAGAAG
TAGAAAATCGAAGTAACAATGGGAATATAGTAGTAACCCTGAGTGAAATA
TATTACAGGCATAGAATCCCTCGAATGCCTGGTGTGCATTTTCATACAGT
CCTTTTTTTCAGATGATTCGTTAGTATTTACTTGTGATTTACTGTATTTG
TTGTAGCCCACCCAAAGACTAGAGCCTTCATCACTCACGCTGGGTCGAAC
GGACTGTACGAAGCCCTGCACCACGGCGTGCCCATGGTCTGTCTGCCGCT
GTTCGGGGATCAGCCCGCCAACGCCGCCCGAGTGGTAGGCAGGGGACTGG
GGGTGAAGTTGGACTTCAGCACGGTCACAGCCGACCAATTGTACCAGGCT
ATTCTTCATGTTGTCACCAACAACAGGTACTGCTGGTTGTGCATACAGGA
TTTGGTATACGTCAAATCGTCCTTACTGTGTAACGTGGCCCAGAAGAGAA
TGAGTTCAAATTTGATGACAGCACAGCGTACACTCATATGTTTTAACAAA
ACACACCGGACACATAGGCACACACACACACACAAGAAAGAAAGAAAGAG
GGATTGAGTGTGGTAGTGGTATTGGTATTAATATCATAGTAATATAAGGA
TTGGTGAATACTATTCAGCAACGAAGTGACTTACATCAAAGTATACCCGA
ACAAAATTATTCATAGTCATCTTAGTACTTTTTATATCCTACCTCACAGC
TACCAGGAAACGGCCGCCCGCCTGTCCCGTCTGCACCGTGACCAGCCCCA
GTCACCCATGGAGCGGGCCGTCTGGTGGATAGAACACGTCATCAAACATG
GCCGACTGCCCCATCTCCGCGCACGCGCCGTGGAGCTGCCGTGGTACCAG
TACTACCTGCTGGACGTGGCTGTGTTCCTGTTTGGCGTCTGTTTAGCTGT
CCTGGGTACCGTGTGGTGCGGCNTACCAGGAAACGGCAGCCCGCCTGTCC
CGCCTGCACCGTGA Coding sequence (CDS) from alignment at Sc0000277:13082..15895+ >transcript:BL95991_evm1 ID=transcript:BL95991_evm1|Name=transcript:BL95991_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=6300bp|location=Sequence derived from alignment at Sc0000277:13082..15895+ (Branchiostoma lanceolatum)
ATGGCAATCGTATCGAAGCCTCGATGTTCCGCCAGTCTGCTAGTTTTCTT
GGGTTTTCTGATCAGACACAGGAGCAGCGCAGAGAAGGTTCTGTTGGTAC
CTCCGCCATTTGGCAACAGCCACTGGATAACTCTGGCCAGAATTGGCCGT
GCTTTGGTGGATAGAGGTTATATCGTCACTGTGGTTGTTTCAGAGGACAT
TGTAGAAAAACGACGAGCAGAGTGGCCTGACTTTCAGTTTGAGACATTCC
AAGACGGAGGAACGCGAGCAACACTCGAGGCAGTTCAAGACCAAGCCCAT
TCTGTGGCTAGAGTATTGTCTCTCTTCGAATTAATTGAAGCATTCGCTTC
TGTGCCAGAGTATCTTAAACAATACTGTGCCCTATTGTTGGAAGAGAGCA
ACCTGTTGGATCAGCTAAGGGCACGTCAGTACAGTGTGGTGATTTCTGAC
CCCTTTTTCCCTTGCGGCGCTGTCCTCTCAGCCCATCTAGACTCCCGGGT
CCCGCACATCGCGGTTATGCGTGCAGATCCTTACTTCCTCGACCTAAAAG
CTACAGGTGTACCGCTGCCGCTGTCGTACGTGCCATTTATATCTACCGAT
TTTACCGATGACATGACCTTTGTAAAACGACTTCAGAACGTTGTCATGTC
TACTCTTGTACCAGTGGTGGGACGTCAGAGTGTGAGCAGCATCTATGACG
GACTTGTCCGCAAGTACATCGGCAAGAAAGAAACAATTCAGAGCGTGACG
TCACGTACGGACTTGTGGCTTTATCGAACGGACAATGTGCTGGATCATCC
TCGTCCCAGCATGCCTAGCATGGTTCAGGTTGGGGGACTGAATGTCCGTG
CGGCCGTCCCACTCACTGAGGACATGGAAGCGTTTGTCCAGAGCTCTGGA
GACGATGGGGTGGTTGTGGTCAGCTTCGGGTCGATGGTGAAGACGATGTC
GACGGCGAGGATCGAAATCTTCGCGGCAGCCTTCGCCCGACTCCGACAGA
AGGTGGTGTGGCGGTACGTGGGAGAGAAGCCCACCGGTCTGGGCAACAAC
ACCAAGTTGCTTGAATGGCTTCCTCAGAACGACTTGCTGGCCCACCCAAA
GACTAGAGCCTTCATCACTCACGCTGGGTCGAACGGACTGTACGAAGCCC
TGCACCACGGCGTGCCCATGGTCTGTCTGCCGCTGTTCGGGGATCAGCCC
GCCAACGCCGCCCGAGTGGTAGGCAGGGGACTGGGGGTGAAGTTGGACTT
CAGCACGGTCACAGCCGACCAATTGTACCAGGCTATTCTTCATGTTGTCA
CCAACAACAGCTACCAGGAAACGGCCGCCCGCCTGTCCCGTCTGCACCGT
GACCAGCCCCAGTCACCCATGGAGCGGGCCGTCTGGTGGATAGAACACGT
CATCAAACATGGCCGACTGCCCCATCTCCGCGCACGCGCCGTGGAGCTGC
CGTGGTACCAGTACTACCTGCTGGACGTGGCTGTGTTCCTGTTTGGCGTC
TGTTTAGCTGTCCTGGGTACCGTGTGGTGCGGCNTACCAGGAAACGGCAG
CCCGCCTGTCCCGCCTGCACCGTGAATGGCAATCGTATCGAAGCCTCGAT
GTTCCGCCAGTCTGCTAGTTTTCTTGGGTTTTCTGATCAGACACAGGAGC
AGCGCAGAGAAGGTTCTGTTGGTACCTCCGCCATTTGGCAACAGCCACTG
GATAACTCTGGCCAGAATTGGCCGTGCTTTGGTGGATAGAGGTTATATCG
TCACTGTGGTTGTTTCAGAGGACATTGTAGAAAAACGACGAGCAGAGTGG
CCTGACTTTCAGTTTGAGACATTCCAAGACGGAGGAACGCGAGCAACACT
CGAGGCAGTTCAAGACCAAGCCCATTCTGTGGCTAGAGTATTGTCTCTCT
TCGAATTAATTGAAGCATTCGCTTCTGTGCCAGAGTATCTTAAACAATAC
TGTGCCCTATTGTTGGAAGAGAGCAACCTGTTGGATCAGCTAAGGGCACG
TCAGTACAGTGTGGTGATTTCTGACCCCTTTTTCCCTTGCGGCGCTGTCC
TCTCAGCCCATCTAGACTCCCGGGTCCCGCACATCGCGGTTATGCGTGCA
GATCCTTACTTCCTCGACCTAAAAGCTACAGGTGTACCGCTGCCGCTGTC
GTACGTGCCATTTATATCTACCGATTTTACCGATGACATGACCTTTGTAA
AACGACTTCAGAACGTTGTCATGTCTACTCTTGTACCAGTGGTGGGACGT
CAGAGTGTGAGCAGCATCTATGACGGACTTGTCCGCAAGTACATCGGCAA
GAAAGAAACAATTCAGAGCGTGACGTCACGTACGGACTTGTGGCTTTATC
GAACGGACAATGTGCTGGATCATCCTCGTCCCAGCATGCCTAGCATGGTT
CAGGTTGGGGGACTGAATGTCCGTGCGGCCGTCCCACTCACTGAGGACAT
GGAAGCGTTTGTCCAGAGCTCTGGAGACGATGGGGTGGTTGTGGTCAGCT
TCGGGTCGATGGTGAAGACGATGTCGACGGCGAGGATCGAAATCTTCGCG
GCAGCCTTCGCCCGACTCCGACAGAAGGTGGTGTGGCGGTACGTGGGAGA
GAAGCCCACCGGTCTGGGCAACAACACCAAGTTGCTTGAATGGCTTCCTC
AGAACGACTTGCTGGCCCACCCAAAGACTAGAGCCTTCATCACTCACGCT
GGGTCGAACGGACTGTACGAAGCCCTGCACCACGGCGTGCCCATGGTCTG
TCTGCCGCTGTTCGGGGATCAGCCCGCCAACGCCGCCCGAGTGGTAGGCA
GGGGACTGGGGGTGAAGTTGGACTTCAGCACGGTCACAGCCGACCAATTG
TACCAGGCTATTCTTCATGTTGTCACCAACAACAGCTACCAGGAAACGGC
CGCCCGCCTGTCCCGTCTGCACCGTGACCAGCCCCAGTCACCCATGGAGC
GGGCCGTCTGGTGGATAGAACACGTCATCAAACATGGCCGACTGCCCCAT
CTCCGCGCACGCGCCGTGGAGCTGCCGTGGTACCAGTACTACCTGCTGGA
CGTGGCTGTGTTCCTGTTTGGCGTCTGTTTAGCTGTCCTGGGTACCGTGT
GGTGCGGCNTACCAGGAAACGGCAGCCCGCCTGTCCCGCCTGCACCGTGA
ATGGCAATCGTATCGAAGCCTCGATGTTCCGCCAGTCTGCTAGTTTTCTT
GGGTTTTCTGATCAGACACAGGAGCAGCGCAGAGAAGGTTCTGTTGGTAC
CTCCGCCATTTGGCAACAGCCACTGGATAACTCTGGCCAGAATTGGCCGT
GCTTTGGTGGATAGAGGTTATATCGTCACTGTGGTTGTTTCAGAGGACAT
TGTAGAAAAACGACGAGCAGAGTGGCCTGACTTTCAGTTTGAGACATTCC
AAGACGGAGGAACGCGAGCAACACTCGAGGCAGTTCAAGACCAAGCCCAT
TCTGTGGCTAGAGTATTGTCTCTCTTCGAATTAATTGAAGCATTCGCTTC
TGTGCCAGAGTATCTTAAACAATACTGTGCCCTATTGTTGGAAGAGAGCA
ACCTGTTGGATCAGCTAAGGGCACGTCAGTACAGTGTGGTGATTTCTGAC
CCCTTTTTCCCTTGCGGCGCTGTCCTCTCAGCCCATCTAGACTCCCGGGT
CCCGCACATCGCGGTTATGCGTGCAGATCCTTACTTCCTCGACCTAAAAG
CTACAGGTGTACCGCTGCCGCTGTCGTACGTGCCATTTATATCTACCGAT
TTTACCGATGACATGACCTTTGTAAAACGACTTCAGAACGTTGTCATGTC
TACTCTTGTACCAGTGGTGGGACGTCAGAGTGTGAGCAGCATCTATGACG
GACTTGTCCGCAAGTACATCGGCAAGAAAGAAACAATTCAGAGCGTGACG
TCACGTACGGACTTGTGGCTTTATCGAACGGACAATGTGCTGGATCATCC
TCGTCCCAGCATGCCTAGCATGGTTCAGGTTGGGGGACTGAATGTCCGTG
CGGCCGTCCCACTCACTGAGGACATGGAAGCGTTTGTCCAGAGCTCTGGA
GACGATGGGGTGGTTGTGGTCAGCTTCGGGTCGATGGTGAAGACGATGTC
GACGGCGAGGATCGAAATCTTCGCGGCAGCCTTCGCCCGACTCCGACAGA
AGGTGGTGTGGCGGTACGTGGGAGAGAAGCCCACCGGTCTGGGCAACAAC
ACCAAGTTGCTTGAATGGCTTCCTCAGAACGACTTGCTGGCCCACCCAAA
GACTAGAGCCTTCATCACTCACGCTGGGTCGAACGGACTGTACGAAGCCC
TGCACCACGGCGTGCCCATGGTCTGTCTGCCGCTGTTCGGGGATCAGCCC
GCCAACGCCGCCCGAGTGGTAGGCAGGGGACTGGGGGTGAAGTTGGACTT
CAGCACGGTCACAGCCGACCAATTGTACCAGGCTATTCTTCATGTTGTCA
CCAACAACAGCTACCAGGAAACGGCCGCCCGCCTGTCCCGTCTGCACCGT
GACCAGCCCCAGTCACCCATGGAGCGGGCCGTCTGGTGGATAGAACACGT
CATCAAACATGGCCGACTGCCCCATCTCCGCGCACGCGCCGTGGAGCTGC
CGTGGTACCAGTACTACCTGCTGGACGTGGCTGTGTTCCTGTTTGGCGTC
TGTTTAGCTGTCCTGGGTACCGTGTGGTGCGGCNTACCAGGAAACGGCAG
CCCGCCTGTCCCGCCTGCACCGTGAATGGCAATCGTATCGAAGCCTCGAT
GTTCCGCCAGTCTGCTAGTTTTCTTGGGTTTTCTGATCAGACACAGGAGC
AGCGCAGAGAAGGTTCTGTTGGTACCTCCGCCATTTGGCAACAGCCACTG
GATAACTCTGGCCAGAATTGGCCGTGCTTTGGTGGATAGAGGTTATATCG
TCACTGTGGTTGTTTCAGAGGACATTGTAGAAAAACGACGAGCAGAGTGG
CCTGACTTTCAGTTTGAGACATTCCAAGACGGAGGAACGCGAGCAACACT
CGAGGCAGTTCAAGACCAAGCCCATTCTGTGGCTAGAGTATTGTCTCTCT
TCGAATTAATTGAAGCATTCGCTTCTGTGCCAGAGTATCTTAAACAATAC
TGTGCCCTATTGTTGGAAGAGAGCAACCTGTTGGATCAGCTAAGGGCACG
TCAGTACAGTGTGGTGATTTCTGACCCCTTTTTCCCTTGCGGCGCTGTCC
TCTCAGCCCATCTAGACTCCCGGGTCCCGCACATCGCGGTTATGCGTGCA
GATCCTTACTTCCTCGACCTAAAAGCTACAGGTGTACCGCTGCCGCTGTC
GTACGTGCCATTTATATCTACCGATTTTACCGATGACATGACCTTTGTAA
AACGACTTCAGAACGTTGTCATGTCTACTCTTGTACCAGTGGTGGGACGT
CAGAGTGTGAGCAGCATCTATGACGGACTTGTCCGCAAGTACATCGGCAA
GAAAGAAACAATTCAGAGCGTGACGTCACGTACGGACTTGTGGCTTTATC
GAACGGACAATGTGCTGGATCATCCTCGTCCCAGCATGCCTAGCATGGTT
CAGGTTGGGGGACTGAATGTCCGTGCGGCCGTCCCACTCACTGAGGACAT
GGAAGCGTTTGTCCAGAGCTCTGGAGACGATGGGGTGGTTGTGGTCAGCT
TCGGGTCGATGGTGAAGACGATGTCGACGGCGAGGATCGAAATCTTCGCG
GCAGCCTTCGCCCGACTCCGACAGAAGGTGGTGTGGCGGTACGTGGGAGA
GAAGCCCACCGGTCTGGGCAACAACACCAAGTTGCTTGAATGGCTTCCTC
AGAACGACTTGCTGGCCCACCCAAAGACTAGAGCCTTCATCACTCACGCT
GGGTCGAACGGACTGTACGAAGCCCTGCACCACGGCGTGCCCATGGTCTG
TCTGCCGCTGTTCGGGGATCAGCCCGCCAACGCCGCCCGAGTGGTAGGCA
GGGGACTGGGGGTGAAGTTGGACTTCAGCACGGTCACAGCCGACCAATTG
TACCAGGCTATTCTTCATGTTGTCACCAACAACAGCTACCAGGAAACGGC
CGCCCGCCTGTCCCGTCTGCACCGTGACCAGCCCCAGTCACCCATGGAGC
GGGCCGTCTGGTGGATAGAACACGTCATCAAACATGGCCGACTGCCCCAT
CTCCGCGCACGCGCCGTGGAGCTGCCGTGGTACCAGTACTACCTGCTGGA
CGTGGCTGTGTTCCTGTTTGGCGTCTGTTTAGCTGTCCTGGGTACCGTGT
GGTGCGGCNTACCAGGAAACGGCAGCCCGCCTGTCCCGCCTGCACCGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000277 | genome | Sc0000277:13082..15895 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95991_evm1 |
| Biotype | protein_coding |
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