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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95990_evm0 >transcript:BL95990_evm0-protein ID=transcript:BL95990_evm0-protein|Name=transcript:BL95990_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=106bp
MKIVLLFAFVAAANAAWLCPNGDVDCDPGECCVRSFLVNTCQTRPGLYDS
CNNDALSVSGYCDCAAGYTCVDFGTSSFSDFFNGDGWCVHGVHGQGEGSG
GDGNDV Run BLAST on NCBI mRNA from alignment at Sc0000274:295111..304994- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95990_evm0 ID=transcript:BL95990_evm0|Name=transcript:BL95990_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=9884bp|location=Sequence derived from alignment at Sc0000274:295111..304994- (Branchiostoma lanceolatum)
ATGAAAATTGTTCTTCTGTTCGCCTTTGTGGCAGCCGCCAACGTGAGTAG
CCATATTTAGATATTCAATATATCTTACAACTTACAGGGAAATATTTTCC
CACTGAATAAGATTTTAACTTTGTTACAGACAGAATATTAACAATTTCAA
TCAAATACCAATCTTAATCTATGGAGTAAGAAGGTAGTAGATACATAATT
TTTCAAAACTTATAACTCTTGAACTGGGATGTGGTTATTTTGGCTGAAAA
TTGATTTAGAAGTCATCAGATTCTCTAAAAGCTACCATTGCAATCCTTAG
TCGTACATGTATATATATTACATTTCAATGAACACTTTCTTGAAAACTAA
TTGACATTGTACTATGCTTTTCGATTAAGATGATATGCCAGTTGTTATGA
ATTCAAACCTTTCCTTAGTGTTCATAACGAGATCCACAATTGCAATGTAA
TTGGTCAAATTCTTCATATGAATTTATGATTACGACACTTAATGGAAGCA
TTGCTGTTGTGTTCTTTTCCGCCAGGCGGCGTGGTTGTGTCCTAACGGTG
ACGCGGACTGTGATCCCGGCGAGTGCTGTATAAGATCTTTCCTCGTCAAC
TCCTGCCAGCCCATGGTTCGTAATAATGATAGAGACTTCGACGATATTTG
TCTAGATCCAAAAACATCACACTCATATCTTTCTGTCCTTGTTTGAAAAG
TTTCTTTCCACGAATGAACTGAAAACTATTACGAAATGGTGCTTTTATTT
CCAAACTCTGTTTAAGGTTTTGTGACAAGCAAGGGAGTAGATATACTTTT
CTCAGACAACATAACGTGATAGTTTTCTAGCTGCACTGAGTAAAAAAAGT
TTACTTTAACTGTCTAGATATATCTCAAAAATCACACAGTATTACACTCT
TTCTTTTTACCCTGCCCATCATTCTCATGATTGACTTGAGTCTTTTGGCG
ATCTTTGTCCAATGATTAATATTTCTGTAAATCCCCGTCATCTAGGGTTC
CCACTCTCTACAATACATCCTGAAGAGTGTTTCTTGAAAATGTTTAGCGG
GTATTTCACTAATGCCGGACATTGCCTAATTGCGCCAAATTGCGAAATAT
GTTCAAAAACGCAAAGTGGCTTAAACCGGCGCCAATCGTCTCAGTTTTTT
TTTTTAAATTTTGAAGAAATTCTAATTTGCAAAATGTCGCAAATGGGTAC
AATCACTACAAGTCTTTTTAAAGTCAGTGGCTATATTGCAATTTCCATTT
AAGTTATCTTATATCTGATTGGTGCCGAAACTGAGAATGTGACATTCCGG
GCGCCGCCATTTTGTTTATAGAGGTCACGTATTGTCGCGCGTCAGTGTGA
TCCCAACGGAAAATTGGCGAAAATACGCAAAGTTGTCGCAATCAGGCGCA
GTCCAGTAAGATGCCCGCTTTAGCAACCACTTTTCTTTTCCCCACTATCC
AGGGCCTGCTGCACGACGCATGCAACAACGAGGGCCTCTCCATCAGCGGC
TACTGCGACTGCGCGGACGGCTTGATCTGCGCCGACTACGGCACCAGCGC
CTTCACTGATTTCTTCGTCGGGGACGGATGGTGTCTTCCCACCCCCACCA
CCACCGCTGCTAATGCAATCAACGACGCATAACTGACCAGTCACCTGTCA
GCAGCTCTGAGAAAGATCATCAATAAACTGCTGAGTAATTAGAACAAAAT
AAAACAACGTGTATGAATATACTTGAATGTGTTGGTGTCATTTCTGATCA
GACAGCAGTTCACATATACGAAGATGAGCTGACAGACTTCGCGTAGGGCT
AAATTGTGCATAATGGAAATCATAAAATCAACAAAAAGAAAAGATGGAAA
AGAAAAGAAACATCGTGTATTGAGCCGAGTACTTGATACTGATTTAAACG
TTCACCAGTACAGTAGAATGTAATATCACGTGTTTTCCTATTCATTGATA
TCAAGCAATCAATCTTCAATCAATCGATCTTTATTGTAAACACCAAATTT
TCAGGCGTGTCTTAGAAGACATGACTGAACTGCGTAGATTATTTTACAAT
TAATTTTAAAAAGCATGTCAAACATTCCATTCGATTAGATAAGCAAACGT
TCGTCTTACCGCCATGTTTATTGAAATACAGTATCATACTAAAACAAACT
TGAGTTTACAGTTTAAGAACAATGCCAAACGTATTTTAATGACTGCGTTC
ATTTACTGATGAATATTTGATCAGTTCGCAGCTGTAGATATCACCAGGCA
ACGCCTAGCAGTGTTGCCAGTATCTCCTCACGTGTTGAAAACTGGTAGCA
GTGAATTTAGATATTGCTAGTAAATCAATAATGCCCTTCGACCTTGATCT
GAACAGGATCTAGGGAACGTGCGACGTGCCCAGGACGTAGCAATAACATA
CTAGTAACTATTATTTTGAGGGTGCGATCACACACACGCACACGCACGCA
CACACACACACACACACACACAAAACACACACACACACACACACATAAAA
AAAGCACACACACAAACACACACACATACATACATACACACACACGCACA
CGCACACAACAAACACACACACACACATATGCACACACATTCATACAAAT
ACATACTCTCACACACAAACGCACAGAGGGAAAGAGGGGGCAAAAAAAGA
CAAGATAGATCTAGAGACAGTCAGACGACCCCAAAACATTGCTTCACTCT
CTCCCTCTCTCTCTCTCTTGCCATGGAGTAGAAATGTCTAACCGGGCAGG
CTGTTACGTTCAGTGCATACTGTACAAGAGGAAATCTTCGCGGTCTTTAG
TTCGCTGTTTTCGCGGTGTCCTCTTCAACGCAAACTTCGAAACACCGCAA
AAACGTTTGCTCCGTCTTCTTCTGGCCTACCCCCTTGTTTCAACCGCGAA
CTTAAAACCACCGCTAACACTCCATTTCCTCCCTAGGCCTACCTCGAAAT
TAAATCCCCGAGAAAATNCTGTTTGCACACATAAACTGTGTAAATTACGG
CGTGCTCTTACGATAATTATCTCTATTTGTAGGGTCAGCAAGTTCAAGCC
AGTAAGATAATTCCAAGTGCATAAATACAGGGCCTTGTAGTCGGGGATCT
CTCTATTCGATTGACCGTCTCACATACCACATCGCCATGAAAATCGTTCT
TCTGTTCGCCTTTGTGGCAGCCGCCAACGTGAGTAATCATATCTAGATAT
TCAATTTATCTTATAGGGAAATATTAATCCACACTTCTCCTGCTGAATAA
GAAAGAGGTAATATTCTTCGATGACCATATGCATAATTTATTTTTCTGAA
CGCTTTTGTTCAATGGAAGACCATGTAGCTGAGCACTTCTATGCATTGAA
CTAAGTTGATGGAAGTTAAAGATGGTTATACTAGTAGAAAGCGGTGAGCA
TTTGAAGGATTGTAGGTTGTATACGGGAGGGATACTGTTTTCATCGACAG
AGTTCCATAGTTTGGCAGTGTGCAAAGAAGATGTTGCTGTAGAAGCACTC
TGAGACTAGTAGTTGAACAATGGCACGGTAGTGACGGCTCCCACCGTTGA
GTCATACCGTGCCAGGCTGGAGGCCTGCCCGCCTTTGCCTGGGACATCAC
CCCCCCCCCCTACTTTGCCCCTCGCGGGGTGGGTGTATTTAAAGTTGAAG
TAAATATAACGGTGTGCGCTAGAGGAAGACCTAGTGTTACGCTGAAAGGC
TCTGGAGGGACAAGTAATCTGAGACCATCGGAGCAATGGCCATGAAAGTA
CCGATAGAAAAGAGATAAGGAGGCAATGTTTCGCCTGTGAGAGAGGCTAT
CCAACGTATGGAGAGAAAAATAGATATACATTGTATATCTAAACTGTAAG
TCGCTGCCATCACAAATGTTGAACGAGGGCGCTGCCCTATGCATTGCTAG
AAAACGAGTCTATGCCAAGGGAAAATATAAACATCAATGGATTGCAATGT
AGTCCTGAAATTAAATAGAAAAGTTATTGAAATTCTCCAAACTACCAGTA
CAGCATTACAAAAACTTAAAGNACAGTCAGACGACCCCAAAACATTGCTT
CACTCTCTCCCTCTCTCTCTCTCTTGCCATGGAGTAGAAATGTCTAACCG
GGCAGGCTGTTACGTTCAGTGCATACTGTACAAGAGGAAATCTTCGCGGT
CTTTAGTTCGCTGTTTTCGCGGTGTCCTCTTCAACGCAAACTTCGAAACA
CCGCAAAAACGTTTGCTCCGTCTTCTTCTGGCCTACCCCCTTGTTTCAAC
CGCGAACTTAAAACCACCGCTAACACTCCATTTCCTCCCTAGGCCTACCT
CGAAATTAAATCCCCGAGAAAATTGTCCTTTAAAAGTATGTGAATATCCG
GCTGCCTTGAAAGTACGTTGACTTAACAAACTAATCGAAAGAATGGAGAT
AGCCAGTCTGTGATATTTGCAGGTTTTGACCTCAAAATCGATCCACTGGA
AATGACGTAAGAGACAGAGTGGGTCGTAGTTATGACACAAATGATACAGC
TAGCTAACCGTTAGGTCATTTCCATCTTGAGCGCCAAAACATATGAATCA
GTCAGAACCCACTACTTAAAAGGATCGTCCCTTATTTTCTTTAAAGTTTC
ACAAAATCTAGAATACTTTGCTTATACAAATTCTGAATGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNCCCCCCCCCCTACTTTGCCCCTCGCGGGGTGGGTGTATTTAAA
GTTGAAGTAAATATAACGGTGTGCGCTAGAGGAAGACCTAGTGTTACGCT
GAAAGGCTCTGGAGGGACAAGTAATCTGAGACCATCGGAGCAATGGCCAT
GAAAGTACCGATAGAAAAGAGATAAGGAGGCAATGTTTCGCCTGTGAGAG
AGGCTATCCAACGTATGGAGAGAAAAATAGATATACATTGTATATCTAAA
CTGTAAGTCGCTGCCATCACAAATGTTGAACGAGGGCGCTGCCCTATGCA
TTGCTAGAAAACGAGTCTATGCCAAGGGAAAATATAAACATCAATGGATT
GCAATGTAGTCCTGAAATTAAATAGAAAAGTTATTGAAATTCTCCAAACT
ACCAGTACAGCATTACAAAAACTTAAAGCCTGTTGTCCTTGTAATTTCAG
TGATATGCCAGTGTTTTTCTGGGTTCAAGTTTTTCCTTAGTGTCTAGAAC
CATAGCGAATGTTGAACTGTAGCTGGTCATGAAGCATTTTTCCTAAACAA
GCCTGTTTTTAGTGGGCCAAAAATATTCTTTCGTTGAACGAATCACGTCA
CAACTTATTGGAGTGGTCCGATCACCGTAATACTGATAAACTTGATAGGC
TATTCTTCTGTTTGTAAAGATTTTCTAAGTCAAGGGCCCGGCCATATATT
TGTCGTACTATCTTACACTGATGGTATTTATTAATTAGCTACCGTCGTCA
AGAAGGTTAATTTTTTATGCTTGTTGTGCATGTGCTGTATTTAATGTAAG
TTAGGCTATGTTGATTTGATTATATACGCGCGCGCATCAGTTTTCGTCCG
TTTCTAAAAAAGTTTTTTCTGGCATGCCGTAAAAAGCAGCTGCAAAATGA
GAAAATACATGCTGCTAATTGCAAAAAAATGTTCCGGAAAACAGATACTC
ATGTCGTAGAACGACGTAGTCAATTCAAAAAAAGAAGTTTTGAAAGAACA
AAAATGAAGGACCTATAAATCGGTATAATACACTTGTACGTGTGTTTAGT
TTTGTTCATTCTACCTGACCACTTAGATTTCATAATGATTGCCACTTTTT
TGTCAAATGTTTCTTTATTCGCACGTTCGCATCAGTTTTGGGGTCCCTCG
ATGATGTCATCCTTATAACAAAATTAACATGGCCTTAGCAGTCTTGTTAC
CGAAGAGACACATTGGCCTTGAAAATTCTGCGGCATCAAAACCATACAAC
GACCTACAGCCCCTCATGTAAGCGTTGCTGTTATGTTCTTTTCCGCCAGG
CGGCGTGGTTGTGTCCTAACGGTGACGTGGACTGTGACCCCGGCGAGTGC
TGTGTCAGATCTTTCCTCGTCAACACCTGCCAGACCAGGGTAAGAAAAAA
CATAGAATTTTCATCTTCATCTTCTATATCAAGAAAGGTCACATTCATAT
CTGTCCCTATGTAAAACACCTTGATAGTTACAGTGTCTTATTCTTGACCA
TCTTTTCTTCAGTCGGCTCCTTATTATTTCTTAATTTCCCGCCGACCTGA
GTTCAACGTTTAGAACAATTTTCCTGAAACTATGTCATTTTAGACTCCAA
ATTCTCACCATGCACATAGGAAAAATCAACAATCATTCCTGAATAATCTA
ATCTCGTTGTTAAGTCACTGAATAGAAATACTATTTGTACACGACCAAGT
GTTTTATTCCACCGACATTTCAGTGACCGTCTGTCATATTCGTTTGGCTG
GTTCACATTGCACTGCAGCATAGGTGTCGCTGCTTATAGATGCGGTCCCC
AAATTTAAGTATTTGCATACATACACCTTACAGTGCAATATGAACCAGTC
AGAATTGCCCTGAGGAAGGTGACAGACGTTCACCGAAACGTCGGTGGAAT
GAAACACTTTTTATTCATCAAGAATCATTATTCTTTAACCCTTAGCCCGG
CCTGTACGACAGTTGCAACAACGACGCCCTCTCCGTCAGCGGCTACTGCG
ACTGCGCGGCCGGATATACCTGCGTCGACTTCGGCACCAGTTCGTTCTCC
GACTTTTTCAACGGTGACGGTTGGTGTGTGCACGGTGTGCACGGCCAGGG
TGAAGGCAGCGGCGGAGACGGAAATGACGTGTAA Coding sequence (CDS) from alignment at Sc0000274:295111..304994- >transcript:BL95990_evm0 ID=transcript:BL95990_evm0|Name=transcript:BL95990_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=963bp|location=Sequence derived from alignment at Sc0000274:295111..304994- (Branchiostoma lanceolatum)
ATGAAAATTGTTCTTCTGTTCGCCTTTGTGGCAGCCGCCAACGCGGCGTG
GTTGTGTCCTAACGGTGACGTGGACTGTGACCCCGGCGAGTGCTGTGTCA
GATCTTTCCTCGTCAACACCTGCCAGACCAGGCCCGGCCTGTACGACAGT
TGCAACAACGACGCCCTCTCCGTCAGCGGCTACTGCGACTGCGCGGCCGG
ATATACCTGCGTCGACTTCGGCACCAGTTCGTTCTCCGACTTTTTCAACG
GTGACGGTTGGTGTGTGCACGGTGTGCACGGCCAGGGTGAAGGCAGCGGC
GGAGACGGAAATGACGTGTAAATGAAAATTGTTCTTCTGTTCGCCTTTGT
GGCAGCCGCCAACGCGGCGTGGTTGTGTCCTAACGGTGACGTGGACTGTG
ACCCCGGCGAGTGCTGTGTCAGATCTTTCCTCGTCAACACCTGCCAGACC
AGGCCCGGCCTGTACGACAGTTGCAACAACGACGCCCTCTCCGTCAGCGG
CTACTGCGACTGCGCGGCCGGATATACCTGCGTCGACTTCGGCACCAGTT
CGTTCTCCGACTTTTTCAACGGTGACGGTTGGTGTGTGCACGGTGTGCAC
GGCCAGGGTGAAGGCAGCGGCGGAGACGGAAATGACGTGTAAATGAAAAT
TGTTCTTCTGTTCGCCTTTGTGGCAGCCGCCAACGCGGCGTGGTTGTGTC
CTAACGGTGACGTGGACTGTGACCCCGGCGAGTGCTGTGTCAGATCTTTC
CTCGTCAACACCTGCCAGACCAGGCCCGGCCTGTACGACAGTTGCAACAA
CGACGCCCTCTCCGTCAGCGGCTACTGCGACTGCGCGGCCGGATATACCT
GCGTCGACTTCGGCACCAGTTCGTTCTCCGACTTTTTCAACGGTGACGGT
TGGTGTGTGCACGGTGTGCACGGCCAGGGTGAAGGCAGCGGCGGAGACGG
AAATGACGTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000274 | genome | Sc0000274:295111..304994 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95990_evm0 |
| Biotype | protein_coding |
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