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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95971_evm1 >transcript:BL95971_evm1-protein ID=transcript:BL95971_evm1-protein|Name=transcript:BL95971_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=343bp
MEWDDLLREYLGEFGRFQKFTALLAILVGPTFGMSLVAMTFLAATPEHHC
RVLGNSSSAGHRYRAEGYNFSVPMENIGGTWKPSSCLMFKESNSTTTPGN
ESTACTHGWEYDRAIYQSTIVTEYDLVCSTAWLKGLGQSTFMAGTSIGGV
FFGTLSDRFGRRPTTVLCLLLHLGLSTGASFTPDYASFIVLRALDGAAAN
GLYFTAFVLAIEVTGPSRRNAVGMAVTLSFGVGFFVLCLLAYFLRTWRNL
QLAQALIMTPLLCYLWVLPESPRWLISNKRVKSARDVLQRAARVNDVTIP
DDVYADLFTMSAESNEKKKSFTLIDLVRTPRLRKITLTGCFVW Run BLAST on NCBI mRNA from alignment at Sc0000247:110518..113943- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95971_evm1 ID=transcript:BL95971_evm1|Name=transcript:BL95971_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3426bp|location=Sequence derived from alignment at Sc0000247:110518..113943- (Branchiostoma lanceolatum)
ATGGAATGGGACGATCTTCTGCGAGAATACCTCGGTGAGTTCGGAAGGTT
TCAAAAGTTCACAGCTCTGCTTGCCATCTTGGTCGGCCCGACCTTTGGTA
TGAGTCTGGTCGCTATGACGTTCCTGGCTGCGACACCAGAACACCATTGC
CGGGTCTTAGGAAACTCCTCTTCGGCAGGACATCGCTACAGGGCCGAGGG
ATATAACTTCAGTGTCCCCATGGAAAATATCGGTGGTACCTGGAAACCCA
GTTCGTGTTTGATGTTCAAGGAATCAAACAGTACAACGACCCCGGGGAAT
GAAAGTACAGCATGTACCCATGGCTGGGAGTATGACCGGGCCATTTACCA
GAGCACCATCGTCACAGAGGTGGGTCTGTTATTGTGCAACGTAATGACTT
AATGTATCAACAAGTGTACATTTGTCACAACAAACTAATCTACCCTAAAA
CAGGCTATGTCGTAAAAAATGAGCCAATATATTATGTTGGTGGAATTCCC
AATGTCTAGGCTCTTTTTTATCTACAGTCCTATTTCACAATGCTGACATA
ATCACACGCGCCAATATGTAGTCATATTTTGCATATGTCACATTGCTACC
TGCATAAGCTACATGTCCATCCGTTCTTTCGAGGAGTATATGCAGAGCCG
TTATAAACTTATGATATGCATGATTGTATGAATCAGAAACCCTTCAAAAC
ATATGTGTACAGAAATTGATACAGTTTTAACTGTAACATATATTTATATG
GGCGTTAAACTATGTTAAACTGTGGACACATGCATGTCATGATTGTTATA
CTGTGTTAAAACTACGGTAAATGTGTACACAATGTATGTCACGAGTGTTA
AAATGTATTACAACTCTATTTAACTGTGTTTTTTAATAACCTGTTTATGT
GATCCTATGTAATTTGCAAACGTTGCTCCTCAGTACGACCTAGTGTGCAG
CACAGCCTGGTTGAAAGGACTGGGTCAGAGCACTTTTATGGCGGGGACCA
GTATAGGTGGGGTCTTCTTTGGCACACTTTCGGACAGGTTTGTATTCATT
ATTAATGGTAATAATGATAATGATGATAATGATTTTCTTCACAGTCGAGT
CGGTATACAATACTTGCTATTTTTCTAACAACATAGAGTTGTTCTATCTT
TAATATCCTCATTGAATGACTATTTTCTTTGTCAATATTTTATGAATAAT
CATAATCAATACCAGGTACCAATAACCTAGCAACGTTTCTGTAGTCCTGC
TTATTTTTTCTCGGGGCAATACTGACGTCGACTGGGTTTTACTTGAGGGG
GGATACAGACTTAGTCACGTTTAGGATTGCATCAATCCCACTGCAGCGTC
ATCTAGCAGTTGGCATTGTCCCGAGGTATGCAGTAGATAAATGATGGCCA
AAATGTAGGCACGTATTCGTAACTTATATTGGTTATGTACAAAGAACCAA
TACCAACCTGATAAACCTATTTACTTATTCCAAATAGATTTGGCCGTCGA
CCTACAACAGTGCTTTGCCTTCTACTGCACCTCGGGTTGAGTACTGGAGC
GTCTTTCACGCCAGACTATGCTTCCTTCATCGTTCTACGCGCGTTAGATG
GAGCCGCTGCCAACGGTCTCTACTTCACCGCCTTTGTTCTAGGTACATTT
GACAGTAGTATGTATAACGCGAACTCCAGTTGTCCGTGGCTGTACTTGCC
ACTCCACGGGCTGATCGGTGACGGGCGGACGCTATAAGCGCGATTCAATC
GGGCTGATTTAACAATATATCGTTGTTGTCTTATCAACCTCGCCACGATG
GTTGTAATGTCCGGATCCGGTGCAGTTCGTGGTTGGTTTGATTGTGGGTA
TGTGGACAGCATAAATGTAGAAATAATTGATTTTTTTTGTCTGATAGTGG
TATGTCTTTAGGTTGATGCAAACTGAAGTACAAGTTTAAAGAGAGACTAG
GCTTCGTAAGTAACTGCATCTGGCTTCATGGGTTTTGCCATGAGGTCGAT
ATCCGTCGCCGTCTCTGTTACATTTTTAAAGACTGAATCTGATATTGTTG
CCTCTATTGGCTCATCGTCATTACAGGGTTCGCGTGTTGCTATTTTACCC
TCGGTCCGTGTGCGCCGTCATTATGACATTTGTGACGTCATGGGTCGGCA
ATTTTGAAAAACTCAGCCTAACCAATCACATCTCCAGTTGAACAGCCATG
ACGTCAGCTCTACGGCATCGTTAAGTCATTGAAGATGTTCTCTTTGATCT
TGTCCTACAGCCATAGAGGTCACCGGGCCTTCCAGACGCAATGCAGTTGG
TATGGCTGTGACCTTGAGTTTCGGAGTCGGATTCTTCGTCCTCTGTCTGC
TGGCCTACTTTCTCCGAACATGGCGGAACCTTCAGCTGGCCCAAGCGTTG
ATAATGACTCCACTCCTGTGCTATTTGTGGTAAGAGTCGTCTGAATACTA
TCAAGCCAGATCACAACTCGATGTGCGCATGTGCAGTGTGACGCACCATT
TGTAAATGTCAATGACTGAGCAATTAATCAATCACTTCCATGGCGTCGCT
TTATGCAGATTGATGAATGAATGAATGAATGGTTTATTAGGAAAAAGTGT
AACATGGTAGCTAAAAGCTGAATTACGTACACTGTACAATCATATATCAC
ATTATCTTAAAAACACAAGGAAAATACTTAAAACGTCTTGACATACATTA
TCAAAATATCCATAACGGTTAAAACGAATCAAATTTATCTACAACTCGGT
GACATAACAAGATTCTTAAAAGGTAATGAAGCAAGCTATTCTGTATCCCA
TTGTGATTAATTATTGAGTAAGTGGACTAGATAGGGTACTGGGGAGTTCT
TGTAGCGGTTAGTTCTGCACTTGATGTTTCTGAGTTTCCCACAGTTTCTA
GTGTTTCTGCCATGTAGTTCCCCCACTGTAGGTGGGAGGAGTTCGGGGTT
AAGTTTGTGGCCTGATTTGATGCATGCGCAGTGGACCAAAAATTGAATGT
AGAGTTTATGGCGTCCCTCGTCTGTATAAATCTCAGTTTTACCGCTGACG
ACGTAAGAAAAACACACATTACCGCAAAAAAATATCCAACCAAAATTTGA
AACGATTTTGTGGCGTCCCCTCAATTCTAGCCATCTAACCGTGTTTACCA
TTGACTAAGCAAAACAAACAAACACTCTTTGCCACAAACAGGGTGCTTCC
AGAGTCTCCCAGATGGCTCATCAGTAACAAACGAGTCAAGTCTGCCAGGG
ACGTCCTGCAGAGAGCAGCTCGGGTAAACGATGTCACCATACCAGACGAT
GTCTACGCGGATCTGTTCACAATGTCAGCTGAATCCAATGAGAAAAAGAA
GAGCTTTACTCTGATTGACCTCGTGCGAACCCCTCGGCTGCGCAAGATCA
CTTTGACAGGGTGTTTTGTGTGGTAA Coding sequence (CDS) from alignment at Sc0000247:110518..113943- >transcript:BL95971_evm1 ID=transcript:BL95971_evm1|Name=transcript:BL95971_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=5160bp|location=Sequence derived from alignment at Sc0000247:110518..113943- (Branchiostoma lanceolatum)
ATGGAATGGGACGATCTTCTGCGAGAATACCTCGGTGAGTTCGGAAGGTT
TCAAAAGTTCACAGCTCTGCTTGCCATCTTGGTCGGCCCGACCTTTGGTA
TGAGTCTGGTCGCTATGACGTTCCTGGCTGCGACACCAGAACACCATTGC
CGGGTCTTAGGAAACTCCTCTTCGGCAGGACATCGCTACAGGGCCGAGGG
ATATAACTTCAGTGTCCCCATGGAAAATATCGGTGGTACCTGGAAACCCA
GTTCGTGTTTGATGTTCAAGGAATCAAACAGTACAACGACCCCGGGGAAT
GAAAGTACAGCATGTACCCATGGCTGGGAGTATGACCGGGCCATTTACCA
GAGCACCATCGTCACAGAGTACGACCTAGTGTGCAGCACAGCCTGGTTGA
AAGGACTGGGTCAGAGCACTTTTATGGCGGGGACCAGTATAGGTGGGGTC
TTCTTTGGCACACTTTCGGACAGATTTGGCCGTCGACCTACAACAGTGCT
TTGCCTTCTACTGCACCTCGGGTTGAGTACTGGAGCGTCTTTCACGCCAG
ACTATGCTTCCTTCATCGTTCTACGCGCGTTAGATGGAGCCGCTGCCAAC
GGTCTCTACTTCACCGCCTTTGTTCTAGCCATAGAGGTCACCGGGCCTTC
CAGACGCAATGCAGTTGGTATGGCTGTGACCTTGAGTTTCGGAGTCGGAT
TCTTCGTCCTCTGTCTGCTGGCCTACTTTCTCCGAACATGGCGGAACCTT
CAGCTGGCCCAAGCGTTGATAATGACTCCACTCCTGTGCTATTTGTGGGT
GCTTCCAGAGTCTCCCAGATGGCTCATCAGTAACAAACGAGTCAAGTCTG
CCAGGGACGTCCTGCAGAGAGCAGCTCGGGTAAACGATGTCACCATACCA
GACGATGTCTACGCGGATCTGTTCACAATGTCAGCTGAATCCAATGAGAA
AAAGAAGAGCTTTACTCTGATTGACCTCGTGCGAACCCCTCGGCTGCGCA
AGATCACTTTGACAGGGTGTTTTGTGTGGTAAATGGAATGGGACGATCTT
CTGCGAGAATACCTCGGTGAGTTCGGAAGGTTTCAAAAGTTCACAGCTCT
GCTTGCCATCTTGGTCGGCCCGACCTTTGGTATGAGTCTGGTCGCTATGA
CGTTCCTGGCTGCGACACCAGAACACCATTGCCGGGTCTTAGGAAACTCC
TCTTCGGCAGGACATCGCTACAGGGCCGAGGGATATAACTTCAGTGTCCC
CATGGAAAATATCGGTGGTACCTGGAAACCCAGTTCGTGTTTGATGTTCA
AGGAATCAAACAGTACAACGACCCCGGGGAATGAAAGTACAGCATGTACC
CATGGCTGGGAGTATGACCGGGCCATTTACCAGAGCACCATCGTCACAGA
GTACGACCTAGTGTGCAGCACAGCCTGGTTGAAAGGACTGGGTCAGAGCA
CTTTTATGGCGGGGACCAGTATAGGTGGGGTCTTCTTTGGCACACTTTCG
GACAGATTTGGCCGTCGACCTACAACAGTGCTTTGCCTTCTACTGCACCT
CGGGTTGAGTACTGGAGCGTCTTTCACGCCAGACTATGCTTCCTTCATCG
TTCTACGCGCGTTAGATGGAGCCGCTGCCAACGGTCTCTACTTCACCGCC
TTTGTTCTAGCCATAGAGGTCACCGGGCCTTCCAGACGCAATGCAGTTGG
TATGGCTGTGACCTTGAGTTTCGGAGTCGGATTCTTCGTCCTCTGTCTGC
TGGCCTACTTTCTCCGAACATGGCGGAACCTTCAGCTGGCCCAAGCGTTG
ATAATGACTCCACTCCTGTGCTATTTGTGGGTGCTTCCAGAGTCTCCCAG
ATGGCTCATCAGTAACAAACGAGTCAAGTCTGCCAGGGACGTCCTGCAGA
GAGCAGCTCGGGTAAACGATGTCACCATACCAGACGATGTCTACGCGGAT
CTGTTCACAATGTCAGCTGAATCCAATGAGAAAAAGAAGAGCTTTACTCT
GATTGACCTCGTGCGAACCCCTCGGCTGCGCAAGATCACTTTGACAGGGT
GTTTTGTGTGGTAAATGGAATGGGACGATCTTCTGCGAGAATACCTCGGT
GAGTTCGGAAGGTTTCAAAAGTTCACAGCTCTGCTTGCCATCTTGGTCGG
CCCGACCTTTGGTATGAGTCTGGTCGCTATGACGTTCCTGGCTGCGACAC
CAGAACACCATTGCCGGGTCTTAGGAAACTCCTCTTCGGCAGGACATCGC
TACAGGGCCGAGGGATATAACTTCAGTGTCCCCATGGAAAATATCGGTGG
TACCTGGAAACCCAGTTCGTGTTTGATGTTCAAGGAATCAAACAGTACAA
CGACCCCGGGGAATGAAAGTACAGCATGTACCCATGGCTGGGAGTATGAC
CGGGCCATTTACCAGAGCACCATCGTCACAGAGTACGACCTAGTGTGCAG
CACAGCCTGGTTGAAAGGACTGGGTCAGAGCACTTTTATGGCGGGGACCA
GTATAGGTGGGGTCTTCTTTGGCACACTTTCGGACAGATTTGGCCGTCGA
CCTACAACAGTGCTTTGCCTTCTACTGCACCTCGGGTTGAGTACTGGAGC
GTCTTTCACGCCAGACTATGCTTCCTTCATCGTTCTACGCGCGTTAGATG
GAGCCGCTGCCAACGGTCTCTACTTCACCGCCTTTGTTCTAGCCATAGAG
GTCACCGGGCCTTCCAGACGCAATGCAGTTGGTATGGCTGTGACCTTGAG
TTTCGGAGTCGGATTCTTCGTCCTCTGTCTGCTGGCCTACTTTCTCCGAA
CATGGCGGAACCTTCAGCTGGCCCAAGCGTTGATAATGACTCCACTCCTG
TGCTATTTGTGGGTGCTTCCAGAGTCTCCCAGATGGCTCATCAGTAACAA
ACGAGTCAAGTCTGCCAGGGACGTCCTGCAGAGAGCAGCTCGGGTAAACG
ATGTCACCATACCAGACGATGTCTACGCGGATCTGTTCACAATGTCAGCT
GAATCCAATGAGAAAAAGAAGAGCTTTACTCTGATTGACCTCGTGCGAAC
CCCTCGGCTGCGCAAGATCACTTTGACAGGGTGTTTTGTGTGGTAAATGG
AATGGGACGATCTTCTGCGAGAATACCTCGGTGAGTTCGGAAGGTTTCAA
AAGTTCACAGCTCTGCTTGCCATCTTGGTCGGCCCGACCTTTGGTATGAG
TCTGGTCGCTATGACGTTCCTGGCTGCGACACCAGAACACCATTGCCGGG
TCTTAGGAAACTCCTCTTCGGCAGGACATCGCTACAGGGCCGAGGGATAT
AACTTCAGTGTCCCCATGGAAAATATCGGTGGTACCTGGAAACCCAGTTC
GTGTTTGATGTTCAAGGAATCAAACAGTACAACGACCCCGGGGAATGAAA
GTACAGCATGTACCCATGGCTGGGAGTATGACCGGGCCATTTACCAGAGC
ACCATCGTCACAGAGTACGACCTAGTGTGCAGCACAGCCTGGTTGAAAGG
ACTGGGTCAGAGCACTTTTATGGCGGGGACCAGTATAGGTGGGGTCTTCT
TTGGCACACTTTCGGACAGATTTGGCCGTCGACCTACAACAGTGCTTTGC
CTTCTACTGCACCTCGGGTTGAGTACTGGAGCGTCTTTCACGCCAGACTA
TGCTTCCTTCATCGTTCTACGCGCGTTAGATGGAGCCGCTGCCAACGGTC
TCTACTTCACCGCCTTTGTTCTAGCCATAGAGGTCACCGGGCCTTCCAGA
CGCAATGCAGTTGGTATGGCTGTGACCTTGAGTTTCGGAGTCGGATTCTT
CGTCCTCTGTCTGCTGGCCTACTTTCTCCGAACATGGCGGAACCTTCAGC
TGGCCCAAGCGTTGATAATGACTCCACTCCTGTGCTATTTGTGGGTGCTT
CCAGAGTCTCCCAGATGGCTCATCAGTAACAAACGAGTCAAGTCTGCCAG
GGACGTCCTGCAGAGAGCAGCTCGGGTAAACGATGTCACCATACCAGACG
ATGTCTACGCGGATCTGTTCACAATGTCAGCTGAATCCAATGAGAAAAAG
AAGAGCTTTACTCTGATTGACCTCGTGCGAACCCCTCGGCTGCGCAAGAT
CACTTTGACAGGGTGTTTTGTGTGGTAAATGGAATGGGACGATCTTCTGC
GAGAATACCTCGGTGAGTTCGGAAGGTTTCAAAAGTTCACAGCTCTGCTT
GCCATCTTGGTCGGCCCGACCTTTGGTATGAGTCTGGTCGCTATGACGTT
CCTGGCTGCGACACCAGAACACCATTGCCGGGTCTTAGGAAACTCCTCTT
CGGCAGGACATCGCTACAGGGCCGAGGGATATAACTTCAGTGTCCCCATG
GAAAATATCGGTGGTACCTGGAAACCCAGTTCGTGTTTGATGTTCAAGGA
ATCAAACAGTACAACGACCCCGGGGAATGAAAGTACAGCATGTACCCATG
GCTGGGAGTATGACCGGGCCATTTACCAGAGCACCATCGTCACAGAGTAC
GACCTAGTGTGCAGCACAGCCTGGTTGAAAGGACTGGGTCAGAGCACTTT
TATGGCGGGGACCAGTATAGGTGGGGTCTTCTTTGGCACACTTTCGGACA
GATTTGGCCGTCGACCTACAACAGTGCTTTGCCTTCTACTGCACCTCGGG
TTGAGTACTGGAGCGTCTTTCACGCCAGACTATGCTTCCTTCATCGTTCT
ACGCGCGTTAGATGGAGCCGCTGCCAACGGTCTCTACTTCACCGCCTTTG
TTCTAGCCATAGAGGTCACCGGGCCTTCCAGACGCAATGCAGTTGGTATG
GCTGTGACCTTGAGTTTCGGAGTCGGATTCTTCGTCCTCTGTCTGCTGGC
CTACTTTCTCCGAACATGGCGGAACCTTCAGCTGGCCCAAGCGTTGATAA
TGACTCCACTCCTGTGCTATTTGTGGGTGCTTCCAGAGTCTCCCAGATGG
CTCATCAGTAACAAACGAGTCAAGTCTGCCAGGGACGTCCTGCAGAGAGC
AGCTCGGGTAAACGATGTCACCATACCAGACGATGTCTACGCGGATCTGT
TCACAATGTCAGCTGAATCCAATGAGAAAAAGAAGAGCTTTACTCTGATT
GACCTCGTGCGAACCCCTCGGCTGCGCAAGATCACTTTGACAGGGTGTTT
TGTGTGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000247 | genome | Sc0000247:110518..113943 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95971_evm1 |
| Biotype | protein_coding |
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