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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95965_evm0 >transcript:BL95965_evm0-protein ID=transcript:BL95965_evm0-protein|Name=transcript:BL95965_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=158bp
MKTVAVFLLFLAGTWAHMCMISPPQRGSMMGINKAGADDCALVTGPCGGR
MAMPHTGIALMAGENFTVTIQKNLDHYMSSSPGMFTINMREGEQGEFKQL
AMIKDMGEPSLSLYSTNITVPHPMGHGMATLQAVYVTKNPQAPAMFYECA
DVHIMPRP Run BLAST on NCBI mRNA from alignment at Sc0000245:351209..355400- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95965_evm0 ID=transcript:BL95965_evm0|Name=transcript:BL95965_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=4192bp|location=Sequence derived from alignment at Sc0000245:351209..355400- (Branchiostoma lanceolatum)
ATGAAGACCGTGGCGGTGTTTCTGCTGTTCCTGGCCGGTACCTGGGCCCA
CATGTGCATGATCAGTCCTCCCCAGCGGGGGTCCATGATGGGGATAAACA
AAGCAGGTGAGGGACGTTCGTTGAAGGGATGATACAAGAAGCTATAAATA
CGTAAGAGTTGATAGCCCTCCCCATATAACTTGCTTGAACCACCTCCTGG
AACACGGGATCCCCATTTTACGTCTTCCACAGTCGGGTACATCTGATGCC
TTTCACAGGATTCATGATATATAAGGCCTGGGTTTATGACTTGAGTCACG
TAACTTAGTCCCAGTACAATTGAAGGCCACGCCCCCTTGCCCACATGTTC
TTAGATCCTCTTGCTTTTTTGTCATTATACATGTATGTGTCTATACATAA
CGTTACTTGATGAGCAACCTTCGACGTCAACTATTTACTATTCGTGAATA
AATTTGTGGCCCGAACAAACAGGTTTTGATCCATGAAACTCCAGTAGTTT
TCCGCTCCCGAAGGTTACATAACAGGTGTGCACAGCGAGGTTGTTTATCA
CGGAGGTAGTTTAGTAACCTGGGCACGAGATCGTCACGAGTTGTCTGGAA
ACTGGATCAGCTGACGAGGCTGGGTACAGTCCGAGGTCACGCGGGTTGTT
TATTGTGAAAACAAACCTTACTAGTTACCGCAAACACGAAGAAGGTAGCC
AAAGAGGCACTCAAAATAAGTTGCGTAATGAAAAACCAATAATTGCCAGC
TGGCAAGAAATTCTGACAAGATAGAAAGCCCGACAAAACGCCAAAAAAAG
ACTCGAAAAATCGGACGGAGGCTAAACTCTGCTTTTTGGCGACGCCCCAA
AAGCAGAGGCTTTGATTTACATTACTACGATTGCTAGAGCTGAAATATTT
AGAATATTAGACGAATGTATCCCGTGGAAAATTGATTTTGTTTTATCTTG
GTAGCCCACGAAATTGGGGACGAATGCTTTATGATATCTATGATATTTGA
TAAGTGGTTATGTGTCAGCAGAACGAATGACAAGTTCGATCAGGGATGTC
ACAGCGGCTTTCTTTGGCACTGCAGCAGAACTTTTATGCAGATTACCCGC
CACCAAAAAAAAATGTGATCACAGCATGTCCAGAACACGAGATATTACAA
CCAGAAGGTCTACTGCAGTACTTAAGAAAGCAGTCAGGGGGCCCAAAATT
GGTGATGAGGGAACTATGGGTATCACAAGGGGAAAATAACACATTGCCAT
GACAACTCGTATGCCTAGCATGCTTAGTGTGCCTGGTCCAGCCTACGTCG
TCATGGTAATGATTTTGTTTACTCCTGCGTTTCCCGGAGGTTTCCGCTTT
TCCCAGCATGTAGCGGGTTCAGTCAAAAAGGGTATGTGAGGATCACTGGC
GTTGGTATGACGTAGTCCTATCCCACATATGACGACATGAACACAAAGGG
GTCTTCTTCCTTATAAGAAATAACACTTGCCAAATATCACCACCGTTGTT
CATTATCTTTTTTCGCCGACTTTGTGGTATCACACATTACTATAGTTTTC
TTTTCCGCCACCATTTGTGTTTCCTGTCTATAGGAGCAGATGACTGCGCC
CTGGTGACCGGGCCGTGTGGCGGGAGGATGGCCATGCCGCATACGGGGAT
CGCTCTGATGTAAGACCTCAGTACCCTACCTTCTCAAGAATCTGTATCAA
CAAGTAATGTGTTGAGTTATCTTGGAACCAGGATTGCATGTGTTGGGTCA
AAATCGGGGCGTACCATAAGGAATGTTGAAGATTATGTCATCAGGATTCG
AATCGAGATTTGACCTGACCTGACGTATCCTTTGCCTCGAGCGTAGTTAC
ACTGACCAATTAGAAATTCACAATTACCTTTTTTGCTTAAACTGTTTACA
TACAAACAGATGTTGGTTAATTGTACATACAGAAACACATAAAACTGAAC
ACACACGCGCGCGCGCGCACACACACACACAGGCATAGATACATACATCC
TTAGGCACACACGTACACACACACATAGATACACACAGGCGCATAAGCAG
TCGTGCTCGCGAACACACACACACACACACACACACACACACACACACAC
ACACATATATAAATGTATACATACACATACAAACACATACACAAACATAT
ATACACATATGACTCGTACACAACAAGTCAAATTGTGAACAATTGAATAT
ATAAACTTACAGTACCAGTGAGGACGTTTCTCCTCTATAGGGAAAGATTG
TGATGACATAATATATGATGGACATCGTAACAGACTAAAATGTATCAACA
AATCCGGTCTATGGACTCTGACATGTTACAACCTTTATTGACACGACAAA
AGTACAGCGAATTGCCGGTCTATAGACTCTACTACAACTATACATTCAAA
CAAACAACTGGGTACAAAGGAATTAACCTAGTATTTAAAGTGACCCGGGT
CGTCTTGAAAAGACGCATAGGGGTGGCGCCCATCTCCATTTCTATAGCCC
TTGGGCAACACACATTTGTGCAAGTCACTACAGCAGGGGACTGGTCCGCT
GGTAGTGATGTGTGTTTTTAACTACCATACTCTTTCCCAAATGCTGAGTG
TTAGGCAGAGAAAGCAGTATGTACCATTTTTAAAGTCTTTGGCATGACCC
GGCCGGGGTTCGAACTCACGACTTACTGTGTACAAGGCGAACACTCTAAC
GTTACCAACTAGGCCATTGAACCTAGTAGTACGTAAAAGTGTATCTATAA
TTCAACATGTTAGGTTTAACGTGTCACTTACTAGTTCTAAGGTCTAAACA
GTCTTTGATATATATTTACCTGTCTGTACATAGTAAGGGCTGTCTCCTAG
AATGTAGTTGAATTTATCTATGGCATGGAATGTATAAAATTTTGCTGAGC
AAGCGGAAAGAAGGTTGAACGGCTCTGCGCGTTTATCATGATAAAGTGCA
CAATTTAGGATAAATGTCGTTCATCTTCAATCTCATTTGATCTTATTCTC
CTTTATTCAGGGCAGGCGAGAACTTCACCGTAACCATACAGAAGAACCTG
GATCATTATATGTCCTCTTCACCGGTACAGGCTGACTTAGTAACAATCAT
AGACAATGTTAGGTACATATGCGTAGCGATGTAACGACATCTTCTGAATG
TACGGGGGGGGGGGTCATAGAAGTCCACAATATACACAACTNGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTCATAGAAGTCCACAATATA
CACAACTGAAAACTTTGTTTTTAATATGGTAAAAAGTCTGTAAGCAAAAT
GGAGTTGCTTTTGGTCCACCCTACACTGCCTTCATCATATTATTTGTAAG
ATGCCCAATATGACATTAGTTGCAAAAAATGTACTTAACGGTCTTTAGAA
AAATACCGATACAATGCACTTACTTAATCTGCTCGGTGACATAGGCCATG
CATCCAGCTATCTATGACACTGCGTTCCTCGACCTCTTACACTTTTCACA
ACAGGGAATGTTCACCATCAACATGCGGGAGGGAGAACAGGGGGAGTTCA
AGCAGCTGGCGATGATCAAAGACATGGGTGAACCGTCCCTGAGTCTCTAC
TCCACCAACATCACTGTCCCGCATCCCATGGGGTAGGTGACGGGCACATC
CCTTTCCTCAACCTATCATGTTTTTTAAAACATTTGTTTGGTTTCTAAAA
CACACTTTGCAGTCGATATTTCTTGCAAATTCTACTTGGAGGTCTGTATG
GGAATTGAATTATGATTTAGTAGCGTTTTAGTCAATTTCTGCAGCAGCTA
CAACTACTACTACTACCAAGTCAATTTTTCCCTAAGCATTACGTGGAAAT
GTCGGTTACACTTAACGGTGTTCTCTAATCTAAAACTGCCTGTTAATGTT
CGTAATGATGGCTCCAGGGAGTTAAGGGGCGAGGAGATTTTCAATGTCCT
TAATTACACCAATTACCTTCGAATAACTAGTCAGCAAAAGTGCTTATTGT
GAATAATGCATGCTTGTTGAACTATTCAGTTGAAGAGCCATTGAAAGTGC
CGATTTGGAAACTGTGCACTGACATCTTTGTCTCCACAGGCACGGCATGG
CGACTCTCCAGGCGGTGTACGTCACCAAGAACCCGCAGGCCCCCGCCATG
TTCTACGAGTGTGCTGACGTCCACATCATGCCCCGGCCGTAG Coding sequence (CDS) from alignment at Sc0000245:351209..355400- >transcript:BL95965_evm0 ID=transcript:BL95965_evm0|Name=transcript:BL95965_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=2385bp|location=Sequence derived from alignment at Sc0000245:351209..355400- (Branchiostoma lanceolatum)
ATGAAGACCGTGGCGGTGTTTCTGCTGTTCCTGGCCGGTACCTGGGCCCA
CATGTGCATGATCAGTCCTCCCCAGCGGGGGTCCATGATGGGGATAAACA
AAGCAGGAGCAGATGACTGCGCCCTGGTGACCGGGCCGTGTGGCGGGAGG
ATGGCCATGCCGCATACGGGGATCGCTCTGATGGCAGGCGAGAACTTCAC
CGTAACCATACAGAAGAACCTGGATCATTATATGTCCTCTTCACCGGGAA
TGTTCACCATCAACATGCGGGAGGGAGAACAGGGGGAGTTCAAGCAGCTG
GCGATGATCAAAGACATGGGTGAACCGTCCCTGAGTCTCTACTCCACCAA
CATCACTGTCCCGCATCCCATGGGGCACGGCATGGCGACTCTCCAGGCGG
TGTACGTCACCAAGAACCCGCAGGCCCCCGCCATGTTCTACGAGTGTGCT
GACGTCCACATCATGCCCCGGCCGTAGATGAAGACCGTGGCGGTGTTTCT
GCTGTTCCTGGCCGGTACCTGGGCCCACATGTGCATGATCAGTCCTCCCC
AGCGGGGGTCCATGATGGGGATAAACAAAGCAGGAGCAGATGACTGCGCC
CTGGTGACCGGGCCGTGTGGCGGGAGGATGGCCATGCCGCATACGGGGAT
CGCTCTGATGGCAGGCGAGAACTTCACCGTAACCATACAGAAGAACCTGG
ATCATTATATGTCCTCTTCACCGGGAATGTTCACCATCAACATGCGGGAG
GGAGAACAGGGGGAGTTCAAGCAGCTGGCGATGATCAAAGACATGGGTGA
ACCGTCCCTGAGTCTCTACTCCACCAACATCACTGTCCCGCATCCCATGG
GGCACGGCATGGCGACTCTCCAGGCGGTGTACGTCACCAAGAACCCGCAG
GCCCCCGCCATGTTCTACGAGTGTGCTGACGTCCACATCATGCCCCGGCC
GTAGATGAAGACCGTGGCGGTGTTTCTGCTGTTCCTGGCCGGTACCTGGG
CCCACATGTGCATGATCAGTCCTCCCCAGCGGGGGTCCATGATGGGGATA
AACAAAGCAGGAGCAGATGACTGCGCCCTGGTGACCGGGCCGTGTGGCGG
GAGGATGGCCATGCCGCATACGGGGATCGCTCTGATGGCAGGCGAGAACT
TCACCGTAACCATACAGAAGAACCTGGATCATTATATGTCCTCTTCACCG
GGAATGTTCACCATCAACATGCGGGAGGGAGAACAGGGGGAGTTCAAGCA
GCTGGCGATGATCAAAGACATGGGTGAACCGTCCCTGAGTCTCTACTCCA
CCAACATCACTGTCCCGCATCCCATGGGGCACGGCATGGCGACTCTCCAG
GCGGTGTACGTCACCAAGAACCCGCAGGCCCCCGCCATGTTCTACGAGTG
TGCTGACGTCCACATCATGCCCCGGCCGTAGATGAAGACCGTGGCGGTGT
TTCTGCTGTTCCTGGCCGGTACCTGGGCCCACATGTGCATGATCAGTCCT
CCCCAGCGGGGGTCCATGATGGGGATAAACAAAGCAGGAGCAGATGACTG
CGCCCTGGTGACCGGGCCGTGTGGCGGGAGGATGGCCATGCCGCATACGG
GGATCGCTCTGATGGCAGGCGAGAACTTCACCGTAACCATACAGAAGAAC
CTGGATCATTATATGTCCTCTTCACCGGGAATGTTCACCATCAACATGCG
GGAGGGAGAACAGGGGGAGTTCAAGCAGCTGGCGATGATCAAAGACATGG
GTGAACCGTCCCTGAGTCTCTACTCCACCAACATCACTGTCCCGCATCCC
ATGGGGCACGGCATGGCGACTCTCCAGGCGGTGTACGTCACCAAGAACCC
GCAGGCCCCCGCCATGTTCTACGAGTGTGCTGACGTCCACATCATGCCCC
GGCCGTAGATGAAGACCGTGGCGGTGTTTCTGCTGTTCCTGGCCGGTACC
TGGGCCCACATGTGCATGATCAGTCCTCCCCAGCGGGGGTCCATGATGGG
GATAAACAAAGCAGGAGCAGATGACTGCGCCCTGGTGACCGGGCCGTGTG
GCGGGAGGATGGCCATGCCGCATACGGGGATCGCTCTGATGGCAGGCGAG
AACTTCACCGTAACCATACAGAAGAACCTGGATCATTATATGTCCTCTTC
ACCGGGAATGTTCACCATCAACATGCGGGAGGGAGAACAGGGGGAGTTCA
AGCAGCTGGCGATGATCAAAGACATGGGTGAACCGTCCCTGAGTCTCTAC
TCCACCAACATCACTGTCCCGCATCCCATGGGGCACGGCATGGCGACTCT
CCAGGCGGTGTACGTCACCAAGAACCCGCAGGCCCCCGCCATGTTCTACG
AGTGTGCTGACGTCCACATCATGCCCCGGCCGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000245 | genome | Sc0000245:351209..355400 - |
Properties
| Property Name | Value |
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| Transcript id | BL95965_evm0 |
| Biotype | protein_coding |
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