|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95952_evm1 >transcript:BL95952_evm1-protein ID=transcript:BL95952_evm1-protein|Name=transcript:BL95952_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=196bp
MVGVTDDGQVCGVSCDHRREDNVRIDIDSVIKGFRPQVFPSQYSVKFTPV
LEQSIHGDAPTNRKVLSITVHTPTDRHQGLYATPHGEVFVRRDGSVEELS
ASGVQEWCRRNYQKDLQVLQDRERQLLRELQDKEHREQQRLKEQQDKDVS
SQNYLQDLYVLQDREQQLLQELQDKEHRLKEVEKKLSSKSKVCVIL Run BLAST on NCBI mRNA from alignment at Sc0000240:274614..275856- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95952_evm1 ID=transcript:BL95952_evm1|Name=transcript:BL95952_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=1243bp|location=Sequence derived from alignment at Sc0000240:274614..275856- (Branchiostoma lanceolatum)
ATGGTGGGAGTCACTGATGATGGTACGTTTACCCGCAAAAAAGTTTACCC
GCTGAAAAGGTTACCTGCAGTCTTAACATAACACTAAGAAACTGTGATGG
CAATATGTCCAAAGGGTACAATGTATGTCAATCAAACCTTAACAGGTAAT
ACAGTTGTCAAAAAGTTTTCAAAAAGTCTGATTTGGTGGTACATGTATAC
ATTGTAACATTGATTTGACCCCAACGTGTTTTTGTTTGACCAGGCCAGGT
GTGCGGCGTCAGCTGTGACCACAGAAGGGAGGACAATGTCAGGATTGACA
TTGACAGTGTTATAAAAGGCTTCAGACCTCAAGTCTTTCCATCACAGTAC
AGTGTCAAGTTCACCCCAGTCCTTGAACAATCAATACATGGTGTGTTATA
CTTTGTATGATGTTCTCTTTCTCTAATAAAAGAGGAGAGAAGGGGAGAAG
TTTTATTAAGATATACAAATGTAGCAATACCATATGTCATGGCTTCCATA
TCTTGGACATGAAAGATGTAACAGTTATTGCAATATCAATGGCAAGTAAT
TTAGATTTGAACTGTACAAATGTAATTGTACCATCAGGTGATGCACCTAC
CAATAGGAAAGTGCTGTCCATCACAGTCCACACTCCTACCGACCGACACC
AAGGTCTGTATGCCACACCCCATGGAGAGGTGTTTGTACGGAGAGATGGA
AGTGTGGAGGAACTCTCAGCCAGTGGTGTGCAGGAGTGGTGTAGAAGAGT
AAGAATCATTGACTTATTTATCTTCAATCTTGTTTTACCATGTCTTACAC
TATACATACAACATAATGGGAGGTACTTTATCAGTTTTGTCCAGGTATTT
GTCTGAAAAACATTCAAATTTTTGTTCACATATTCCACAGACCTTAGGAT
AGAAGATAAGACTCATCTAACTTCCCGTGCCTGATGAAGAAATTCTAACT
CAATTGTATTACAAATTAACAATCCTTCCCAGAACTACCAGAAGGACCTG
CAGGTACTGCAGGACAGGGAGCGACAACTTCTCAGGGAACTACAAGACAA
GGAGCACAGGGAGCAGCAGCGACTCAAGGAACAACAAGACAAAGATGTTT
CCTCCCAGAATTACCTGCAGGATTTGTATGTCCTACAGGATAGGGAGCAA
CAGCTCCTTCAGGAACTACAAGACAAAGAACACAGGTTAAAGGAGGTGGA
GAAAAAGCTTTCATCAAAGTCCAAAGTCTGTGTCATCTTATGA Coding sequence (CDS) from alignment at Sc0000240:274614..275856- >transcript:BL95952_evm1 ID=transcript:BL95952_evm1|Name=transcript:BL95952_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2364bp|location=Sequence derived from alignment at Sc0000240:274614..275856- (Branchiostoma lanceolatum)
ATGGTGGGAGTCACTGATGATGGCCAGGTGTGCGGCGTCAGCTGTGACCA
CAGAAGGGAGGACAATGTCAGGATTGACATTGACAGTGTTATAAAAGGCT
TCAGACCTCAAGTCTTTCCATCACAGTACAGTGTCAAGTTCACCCCAGTC
CTTGAACAATCAATACATGGTGATGCACCTACCAATAGGAAAGTGCTGTC
CATCACAGTCCACACTCCTACCGACCGACACCAAGGTCTGTATGCCACAC
CCCATGGAGAGGTGTTTGTACGGAGAGATGGAAGTGTGGAGGAACTCTCA
GCCAGTGGTGTGCAGGAGTGGTGTAGAAGAAACTACCAGAAGGACCTGCA
GGTACTGCAGGACAGGGAGCGACAACTTCTCAGGGAACTACAAGACAAGG
AGCACAGGGAGCAGCAGCGACTCAAGGAACAACAAGACAAAGATGTTTCC
TCCCAGAATTACCTGCAGGATTTGTATGTCCTACAGGATAGGGAGCAACA
GCTCCTTCAGGAACTACAAGACAAAGAACACAGGTTAAAGGAGGTGGAGA
AAAAGCTTTCATCAAAGTCCAAAGTCTGTGTCATCTTATGAATGGTGGGA
GTCACTGATGATGGCCAGGTGTGCGGCGTCAGCTGTGACCACAGAAGGGA
GGACAATGTCAGGATTGACATTGACAGTGTTATAAAAGGCTTCAGACCTC
AAGTCTTTCCATCACAGTACAGTGTCAAGTTCACCCCAGTCCTTGAACAA
TCAATACATGGTGATGCACCTACCAATAGGAAAGTGCTGTCCATCACAGT
CCACACTCCTACCGACCGACACCAAGGTCTGTATGCCACACCCCATGGAG
AGGTGTTTGTACGGAGAGATGGAAGTGTGGAGGAACTCTCAGCCAGTGGT
GTGCAGGAGTGGTGTAGAAGAAACTACCAGAAGGACCTGCAGGTACTGCA
GGACAGGGAGCGACAACTTCTCAGGGAACTACAAGACAAGGAGCACAGGG
AGCAGCAGCGACTCAAGGAACAACAAGACAAAGATGTTTCCTCCCAGAAT
TACCTGCAGGATTTGTATGTCCTACAGGATAGGGAGCAACAGCTCCTTCA
GGAACTACAAGACAAAGAACACAGGTTAAAGGAGGTGGAGAAAAAGCTTT
CATCAAAGTCCAAAGTCTGTGTCATCTTATGAATGGTGGGAGTCACTGAT
GATGGCCAGGTGTGCGGCGTCAGCTGTGACCACAGAAGGGAGGACAATGT
CAGGATTGACATTGACAGTGTTATAAAAGGCTTCAGACCTCAAGTCTTTC
CATCACAGTACAGTGTCAAGTTCACCCCAGTCCTTGAACAATCAATACAT
GGTGATGCACCTACCAATAGGAAAGTGCTGTCCATCACAGTCCACACTCC
TACCGACCGACACCAAGGTCTGTATGCCACACCCCATGGAGAGGTGTTTG
TACGGAGAGATGGAAGTGTGGAGGAACTCTCAGCCAGTGGTGTGCAGGAG
TGGTGTAGAAGAAACTACCAGAAGGACCTGCAGGTACTGCAGGACAGGGA
GCGACAACTTCTCAGGGAACTACAAGACAAGGAGCACAGGGAGCAGCAGC
GACTCAAGGAACAACAAGACAAAGATGTTTCCTCCCAGAATTACCTGCAG
GATTTGTATGTCCTACAGGATAGGGAGCAACAGCTCCTTCAGGAACTACA
AGACAAAGAACACAGGTTAAAGGAGGTGGAGAAAAAGCTTTCATCAAAGT
CCAAAGTCTGTGTCATCTTATGAATGGTGGGAGTCACTGATGATGGCCAG
GTGTGCGGCGTCAGCTGTGACCACAGAAGGGAGGACAATGTCAGGATTGA
CATTGACAGTGTTATAAAAGGCTTCAGACCTCAAGTCTTTCCATCACAGT
ACAGTGTCAAGTTCACCCCAGTCCTTGAACAATCAATACATGGTGATGCA
CCTACCAATAGGAAAGTGCTGTCCATCACAGTCCACACTCCTACCGACCG
ACACCAAGGTCTGTATGCCACACCCCATGGAGAGGTGTTTGTACGGAGAG
ATGGAAGTGTGGAGGAACTCTCAGCCAGTGGTGTGCAGGAGTGGTGTAGA
AGAAACTACCAGAAGGACCTGCAGGTACTGCAGGACAGGGAGCGACAACT
TCTCAGGGAACTACAAGACAAGGAGCACAGGGAGCAGCAGCGACTCAAGG
AACAACAAGACAAAGATGTTTCCTCCCAGAATTACCTGCAGGATTTGTAT
GTCCTACAGGATAGGGAGCAACAGCTCCTTCAGGAACTACAAGACAAAGA
ACACAGGTTAAAGGAGGTGGAGAAAAAGCTTTCATCAAAGTCCAAAGTCT
GTGTCATCTTATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000240 | genome | Sc0000240:274614..275856 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95952_evm1 |
| Biotype | protein_coding |
|
