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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95945_evm0 >transcript:BL95945_evm0-protein ID=transcript:BL95945_evm0-protein|Name=transcript:BL95945_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=214bp
MAPKRAALDTGPDTVDKVPTKPKPKRKKPSPPKVPKCGCRGDCRTRKCAC
GKKGEACGDSCKCAGCVNPFNILKEYNIDLSDIALDNCLMDNIFKVKDLQ
ERLEQTYEMECCEESVQLKDMLPRVAHCPGEECGYEWKYSWCWDTFVDEE
NRPSYHCEKCRRCGDYRSDHCERCNKCYFAGLTGLPCPCRENYDSDVDSD
DSDEFRERETCAVM Run BLAST on NCBI mRNA from alignment at Sc0000235:199287..203850+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95945_evm0 ID=transcript:BL95945_evm0|Name=transcript:BL95945_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=4564bp|location=Sequence derived from alignment at Sc0000235:199287..203850+ (Branchiostoma lanceolatum)
ATGGCACCTAAGCGCGCAGCCCTGGATACTGGACCGGACACAGTGGATAA
AGGTACGTAGATATATTCTCACACAATCTCAAAACTTTCTGGTGCATATT
ATTGATTTGCTTGGATACTTGGACACAGCTGCTTGGCCTTCCCAGTTCTA
TTTACCACAGAAACCGAAGCTGTGCGTAACATAAGCTTTGCATTACATGT
AGTTCTGACTCTTGTTGAAGGTGTAATTACCAAATTATAGGACGAGAAAA
ATTATCATGACCTCCAAAGTTTGACTTTGAGGAGAACTGTTTTCTCTCTT
TTAAATTATTTTTGCCACTTCAATTTTTTGCCGATATCGATTGAGTAAGT
TTCTAAAACAACTTTAGCAAGAATAAGGCACATAAATTTACCAGGCTAAC
TTTAGGAATGAAACCAGTCCCTGTATTATTTTGTTTGAGCTCTGTGGTTT
GAACTAGAATTTCTGGCGGGACTAGAAATTCTGGCGGGAACGTGACTTGC
TGTCAGCGTGTCTAATGAAAACCAGATGTAGATCTGAATACACACCCTCT
TCTGTCATGTATGCAAAACAAAAGACGCTTTGGGAGAAGCCGAGGTGTGA
AATAACCTGTGAACTTCTGTGCTGTGTGTCATTGTCTTGTGTTCTCTACT
GTCTGGTGGAAGTTTGTTACGGAAAGTTGGATGTGTAAATGATGCCATAG
CCCCGCCCACTTCGGTCAAAACATAGAAATGCAAAACTGAAATGTAGAAA
TGCACAAATTTTACTGTTATGCAGCCACTCGCTTATTTGCATGGTTAAAC
TGGGAACAGACAATTAAAGAAGATACTACTAGTATTTGAGGATTTCCTGT
CGACAAAATGGAATGATTTTGTGACATACTGGCTACAATCATGTTTACTT
TTTGTTGCCTGCTACTACTACAAAGACTAAACTAGAATGGCAACATTTTC
GGGAAAATGCAGAATATTCCCCTCCCATTACCTACACCTCAAATATGACA
TCCTTGGCATTGACTGTAAGGATATGACGAAGTTTCTGCATAAATTATGC
AAAGGAGGTCGGCATTAGCATAATTTATGGCCAGGTGTGTTCGGCCTTTC
CTAAAGGTACCTACATCTCAAATATGACATCCGTAGCTTTTATGGTTAGG
GATATGCATAAATTATGCATAATGCACTCATTAGCATAATTTATGGCCAG
GTTTTCTGACCTTTCCTAAAGGTACCTGCATCTCATCCGTAGCCTTTACA
GTAAGGGAAAAACAAGTTTATGCATAAATTATGCAAATGAGGTCCGCATT
AGCATAATTTATGTACAGGTGTGTTCACCTCTCCTAAAGGTACCTACATC
TGAAATATGCCATCCGTAGTCTTTACGGTAAGGGATATACATACATTATG
CAAATGAGGTCTGCATTAGCATAATTTATGTACAGGTGTGTTCACCTCTC
TTAAAGGTACCTACATCTGAAATATGCCATCCGTAGTCTTTACGGTAAGG
GATATACATACATTATGCAAATGAGGTCCGCATTAGCATAATTTATGTAC
AGGTGTGTTCACCTCTCTTTAAGGTACCTACNCCTACATTTCAAATATGA
CATCTGTAGCTTTTACGGTAAGGGAAATACAAGTTTTTGCATAAATTATG
CAAATGAGGTCCTCATTAGCATAATTTATGTCCAGGTGTGTTCACCTTTC
CTACAGATACCTACATCTCAAATATGACATCTGTAGCTTTTACGGTAAGG
GAAATACAAGTTTCTGCATAAATTATGCAAATGAGGTCCTCATTACCATA
ATTCATGTCCAGGTGTGTTCACCTTTCCTACAGATACCTACATCTCAAAT
ATGACATCTGCAGCTTTTACTGTAAACGCAATACACGTTTTTGTATAAAT
TATGCAAATGATGTCCTCATTAGCATAATTTATTGTCAGGTGTATTTACC
TTTCCTATAGGTACCTACATCTCAAATATAACATCCGTACATTGTAACAT
AAGGTACATATAACTTGCTGCAANGGTAGATACAGCCGGACTCCTCCTAG
CGATAGGCTATGTGCACTCTGTAATAAGAACTCTATAGAAGATGAAGAAC
ATTTTATTCTAGAATGCTCACTGTACAAAGATTTACGCATCTCTTTGGTT
AACGCAATACAACTAGACCAGAGATATACAAACTTAACAAATGACAAACT
GTTCACATACTTGATGTCATCAAATAATCAATCTGTAATTGAGAAACTCT
GTGAATTCGTGTACACATGTCTCAAGAAGAGAGAAGTAGCGTGTAAACAT
TAGAAGTAGATAGAACACAGAATAGTTTTCTTCATTTTTTTTCTGTTATT
ACAATGCACAATTGTATCACTTATAATGCATTTAGCCCGGAAGGGCATGA
ACATGCAATAAACATGAATGAACTAGTAGTACTAGTATGATCAAGGAGGT
GAACCTCCTTGGTATGACATAAAATTTTATGAAGCCAGTCTGTACTTGAC
ACTAAGAAAGCTTTTGTGTTTCCATCATCAGTGCCCACCAAGCCGAAGCC
CAAGAGAAAGAAGCCCAGCCCTCCTAAGGTCCCAAAGTGTGGCTGTAGAG
GGGACTGCAGAACAAGGTGATCACAATCTCCTGCTAAATAACGTTTTGAT
GTTTGAAAATTGTTTGCTTCATGAGGCTTTAGTCTTTACTTGTGACTGTC
CTTTGATTAAAGGATTAAAAAAAGCAAAAAACTGCAGATATTGAATTTAA
AACGTCCCGCTACCTGATTGGCCGACACCTATAATTAAGGTACAAATGTT
CTATAATTGGACTCGACCTAGCCTGGGTGCCATCCTATTTCTACCGGGGC
TCCTACACTCGCTACCCTCAAAAATGGCACCCAGGCTAGACTCGACCATT
GCGGGAAACCAGGCGCAAAAATGTCGCTAAGTTCTGCACTGGATGTAGAT
TGCCAAAAAAAATGAGTACAGATCTTGGTTTGATACGGTTTTTATCCAGA
ATATACTCCTTGCACAAGACAAGTGACAGAGAGAGAGACATAGTATCAGT
AGTTCATAGTTGTATCTATGAAACACATGATTTTTATGTTTCCCTATTTA
CCAATATTTGCAGAAAATGTGCCTGTGGAAAGAAGGGGGAGGCCTGTGGG
GACTCCTGCAAGTGTGCTGGCTGCGTAAACCCCTTTAACATCCTCAAGGA
GTATAACATCGACTTGTCGGACATAGCCCTGGACAACTGTCTCATGGACA
ACATCTTCAAGGTATAACAGGAGTTATACATGTTCACACACAGTTCAGCA
GCACCATATATAAAGAAAAGAAATTGACAATTACACATGACATTTCCAGT
TTAAACAAGTTCAGATTATACCTCGATGTTATGATAAAAGTTTGTTACAT
GTATTTCTATTTTTGTACCCTTGTGCAGGTTAAAGACCTACAGGAGCGTC
TGGAGCAGACTTATGAAATGGAGTGCTGTGAGGAGTCTGTACAGGTCAGT
AATGATGTATTCATGAAAAGAGAGACATTGAAGCCCAGAATTTCCTCTGT
TGATGCTCAGTATTTTCCATGTTGCACTTCCATGTTATTGATACAACTGT
CAGCTGTTGCAGGTCAATACTAAAAGATTGAGGTTACAGGTTATTATAAA
CTTCGAAAATTAGGCCCCACTGCACGGTTATCACTTTTTTCATTGTTCAA
ATTGTAGAAAGGAATGTGTGAGACTTGACTTTGACTTGTGTTTTTCTCCA
TGCAGCTGAAGGACATGTTGCCCAGGGTGGCCCACTGTCCTGGTGAGGAG
TGTGGGTATGAGTGGAAGTACTCCTGGTGTTGGGACACCTTCGTTGATGA
GGAGAACCGTCCGAGCTACCACTGTGAGAAGTGCCGCAGGTGTGGGGACT
ACAGGAGTGACCATTGTGAGGTACTGACCAAACATTTCCGATCGGCAATT
CCCATCGTATACGATATAGCGTTTAAAGTTTATGACTATGGTGTTGCTTT
CATTTACCTTCATAACCTTTGGATTCAAATGCTTGATAATATACAGTATG
CTAGTGACTAACATGGTTATGGTTAACTTGGTTAACACTTTAAGATGGAC
TGTTAGTCTGTTACTGATTCATAAGTCATAGTCTGTATGGTCTGCTTGCT
ATATAAAATGGGTGTGTTTATAGATTCATTAGCGCTTGTAATCATGTTAT
CTGTATCTTTGTTATATTTTGCCCGACCCTTACCTCTTCACTTGTGAGTT
GTGACTTCATTGAAAGGTGTCCTGTAGGCTGATTTGAGCTTCTCTTGAAT
AAACAAAGTTTACACAAACAAACAAACAAGGAATGTGTGCTTATGACTAG
TCCTGGCATCATTGCAAAGCAAAAATAGCCTTAGCAAACCAACTAACCAA
TTAATCATAACTAATTAAGTCACTGTATTTTCCAGAGATGCAACAAGTGC
TACTTTGCTGGCCTCACTGGTTTGCCATGCCCATGCAGGGAGAACTATGA
CTCAGACGTGGACAGTGACGACTCAGATGAGTTCCGTGAAAGAGAAACAT
GTGCTGTCATGTGA Coding sequence (CDS) from alignment at Sc0000235:199287..203850+ >transcript:BL95945_evm0 ID=transcript:BL95945_evm0|Name=transcript:BL95945_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=3870bp|location=Sequence derived from alignment at Sc0000235:199287..203850+ (Branchiostoma lanceolatum)
ATGGCACCTAAGCGCGCAGCCCTGGATACTGGACCGGACACAGTGGATAA
AGTGCCCACCAAGCCGAAGCCCAAGAGAAAGAAGCCCAGCCCTCCTAAGG
TCCCAAAGTGTGGCTGTAGAGGGGACTGCAGAACAAGAAAATGTGCCTGT
GGAAAGAAGGGGGAGGCCTGTGGGGACTCCTGCAAGTGTGCTGGCTGCGT
AAACCCCTTTAACATCCTCAAGGAGTATAACATCGACTTGTCGGACATAG
CCCTGGACAACTGTCTCATGGACAACATCTTCAAGGTTAAAGACCTACAG
GAGCGTCTGGAGCAGACTTATGAAATGGAGTGCTGTGAGGAGTCTGTACA
GCTGAAGGACATGTTGCCCAGGGTGGCCCACTGTCCTGGTGAGGAGTGTG
GGTATGAGTGGAAGTACTCCTGGTGTTGGGACACCTTCGTTGATGAGGAG
AACCGTCCGAGCTACCACTGTGAGAAGTGCCGCAGGTGTGGGGACTACAG
GAGTGACCATTGTGAGAGATGCAACAAGTGCTACTTTGCTGGCCTCACTG
GTTTGCCATGCCCATGCAGGGAGAACTATGACTCAGACGTGGACAGTGAC
GACTCAGATGAGTTCCGTGAAAGAGAAACATGTGCTGTCATGTGAATGGC
ACCTAAGCGCGCAGCCCTGGATACTGGACCGGACACAGTGGATAAAGTGC
CCACCAAGCCGAAGCCCAAGAGAAAGAAGCCCAGCCCTCCTAAGGTCCCA
AAGTGTGGCTGTAGAGGGGACTGCAGAACAAGAAAATGTGCCTGTGGAAA
GAAGGGGGAGGCCTGTGGGGACTCCTGCAAGTGTGCTGGCTGCGTAAACC
CCTTTAACATCCTCAAGGAGTATAACATCGACTTGTCGGACATAGCCCTG
GACAACTGTCTCATGGACAACATCTTCAAGGTTAAAGACCTACAGGAGCG
TCTGGAGCAGACTTATGAAATGGAGTGCTGTGAGGAGTCTGTACAGCTGA
AGGACATGTTGCCCAGGGTGGCCCACTGTCCTGGTGAGGAGTGTGGGTAT
GAGTGGAAGTACTCCTGGTGTTGGGACACCTTCGTTGATGAGGAGAACCG
TCCGAGCTACCACTGTGAGAAGTGCCGCAGGTGTGGGGACTACAGGAGTG
ACCATTGTGAGAGATGCAACAAGTGCTACTTTGCTGGCCTCACTGGTTTG
CCATGCCCATGCAGGGAGAACTATGACTCAGACGTGGACAGTGACGACTC
AGATGAGTTCCGTGAAAGAGAAACATGTGCTGTCATGTGAATGGCACCTA
AGCGCGCAGCCCTGGATACTGGACCGGACACAGTGGATAAAGTGCCCACC
AAGCCGAAGCCCAAGAGAAAGAAGCCCAGCCCTCCTAAGGTCCCAAAGTG
TGGCTGTAGAGGGGACTGCAGAACAAGAAAATGTGCCTGTGGAAAGAAGG
GGGAGGCCTGTGGGGACTCCTGCAAGTGTGCTGGCTGCGTAAACCCCTTT
AACATCCTCAAGGAGTATAACATCGACTTGTCGGACATAGCCCTGGACAA
CTGTCTCATGGACAACATCTTCAAGGTTAAAGACCTACAGGAGCGTCTGG
AGCAGACTTATGAAATGGAGTGCTGTGAGGAGTCTGTACAGCTGAAGGAC
ATGTTGCCCAGGGTGGCCCACTGTCCTGGTGAGGAGTGTGGGTATGAGTG
GAAGTACTCCTGGTGTTGGGACACCTTCGTTGATGAGGAGAACCGTCCGA
GCTACCACTGTGAGAAGTGCCGCAGGTGTGGGGACTACAGGAGTGACCAT
TGTGAGAGATGCAACAAGTGCTACTTTGCTGGCCTCACTGGTTTGCCATG
CCCATGCAGGGAGAACTATGACTCAGACGTGGACAGTGACGACTCAGATG
AGTTCCGTGAAAGAGAAACATGTGCTGTCATGTGAATGGCACCTAAGCGC
GCAGCCCTGGATACTGGACCGGACACAGTGGATAAAGTGCCCACCAAGCC
GAAGCCCAAGAGAAAGAAGCCCAGCCCTCCTAAGGTCCCAAAGTGTGGCT
GTAGAGGGGACTGCAGAACAAGAAAATGTGCCTGTGGAAAGAAGGGGGAG
GCCTGTGGGGACTCCTGCAAGTGTGCTGGCTGCGTAAACCCCTTTAACAT
CCTCAAGGAGTATAACATCGACTTGTCGGACATAGCCCTGGACAACTGTC
TCATGGACAACATCTTCAAGGTTAAAGACCTACAGGAGCGTCTGGAGCAG
ACTTATGAAATGGAGTGCTGTGAGGAGTCTGTACAGCTGAAGGACATGTT
GCCCAGGGTGGCCCACTGTCCTGGTGAGGAGTGTGGGTATGAGTGGAAGT
ACTCCTGGTGTTGGGACACCTTCGTTGATGAGGAGAACCGTCCGAGCTAC
CACTGTGAGAAGTGCCGCAGGTGTGGGGACTACAGGAGTGACCATTGTGA
GAGATGCAACAAGTGCTACTTTGCTGGCCTCACTGGTTTGCCATGCCCAT
GCAGGGAGAACTATGACTCAGACGTGGACAGTGACGACTCAGATGAGTTC
CGTGAAAGAGAAACATGTGCTGTCATGTGAATGGCACCTAAGCGCGCAGC
CCTGGATACTGGACCGGACACAGTGGATAAAGTGCCCACCAAGCCGAAGC
CCAAGAGAAAGAAGCCCAGCCCTCCTAAGGTCCCAAAGTGTGGCTGTAGA
GGGGACTGCAGAACAAGAAAATGTGCCTGTGGAAAGAAGGGGGAGGCCTG
TGGGGACTCCTGCAAGTGTGCTGGCTGCGTAAACCCCTTTAACATCCTCA
AGGAGTATAACATCGACTTGTCGGACATAGCCCTGGACAACTGTCTCATG
GACAACATCTTCAAGGTTAAAGACCTACAGGAGCGTCTGGAGCAGACTTA
TGAAATGGAGTGCTGTGAGGAGTCTGTACAGCTGAAGGACATGTTGCCCA
GGGTGGCCCACTGTCCTGGTGAGGAGTGTGGGTATGAGTGGAAGTACTCC
TGGTGTTGGGACACCTTCGTTGATGAGGAGAACCGTCCGAGCTACCACTG
TGAGAAGTGCCGCAGGTGTGGGGACTACAGGAGTGACCATTGTGAGAGAT
GCAACAAGTGCTACTTTGCTGGCCTCACTGGTTTGCCATGCCCATGCAGG
GAGAACTATGACTCAGACGTGGACAGTGACGACTCAGATGAGTTCCGTGA
AAGAGAAACATGTGCTGTCATGTGAATGGCACCTAAGCGCGCAGCCCTGG
ATACTGGACCGGACACAGTGGATAAAGTGCCCACCAAGCCGAAGCCCAAG
AGAAAGAAGCCCAGCCCTCCTAAGGTCCCAAAGTGTGGCTGTAGAGGGGA
CTGCAGAACAAGAAAATGTGCCTGTGGAAAGAAGGGGGAGGCCTGTGGGG
ACTCCTGCAAGTGTGCTGGCTGCGTAAACCCCTTTAACATCCTCAAGGAG
TATAACATCGACTTGTCGGACATAGCCCTGGACAACTGTCTCATGGACAA
CATCTTCAAGGTTAAAGACCTACAGGAGCGTCTGGAGCAGACTTATGAAA
TGGAGTGCTGTGAGGAGTCTGTACAGCTGAAGGACATGTTGCCCAGGGTG
GCCCACTGTCCTGGTGAGGAGTGTGGGTATGAGTGGAAGTACTCCTGGTG
TTGGGACACCTTCGTTGATGAGGAGAACCGTCCGAGCTACCACTGTGAGA
AGTGCCGCAGGTGTGGGGACTACAGGAGTGACCATTGTGAGAGATGCAAC
AAGTGCTACTTTGCTGGCCTCACTGGTTTGCCATGCCCATGCAGGGAGAA
CTATGACTCAGACGTGGACAGTGACGACTCAGATGAGTTCCGTGAAAGAG
AAACATGTGCTGTCATGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000235 | genome | Sc0000235:199287..203850 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95945_evm0 |
| Biotype | protein_coding |
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