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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95944_evm2 >transcript:BL95944_evm2-protein ID=transcript:BL95944_evm2-protein|Name=transcript:BL95944_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=233bp
MAPKRAAVDAEQQTAGKAPAKPKPKRKKPSPPKAPKCGCKGDCRSRKCGC
GKKGEACGDSCKCAGCKNPFKILKEYNIDCVAAAQDKCLMDNIFKIEDLR
GRLEHRLRTECCGRAVRLKNMLPGTITQCNCPDCGHEWQYSWCSHELVDW
ETRPRNHCGICRRCGDYRDAHCQKCNKCYFAGMSGFECPCQDRRPNPEGD
LGSMGIFMKWAMQYLAGDDSDGLSDDSEDEGFI Run BLAST on NCBI mRNA from alignment at Sc0000235:225500..229099+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95944_evm2 ID=transcript:BL95944_evm2|Name=transcript:BL95944_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=3600bp|location=Sequence derived from alignment at Sc0000235:225500..229099+ (Branchiostoma lanceolatum)
ATGGCACCCAAGCGCGCAGCTGTGGATGCTGAGCAGCAGACGGCGGGCAA
AGGTACGTGCAAAATCTTCCCGGTGCTTTATGATATGAGAGTCAAGGACA
TAATTTCCTTGATAGTGTACAGTTGGGTAGCGTAGAGTAAAGTTTACAGG
TGGGATGTTCTTCCAGTTTAGACCGCTCCACATCCGTCTCCCATCCGTCT
CTTCTTTAACCTGTCACAGTGAGTGGGTCTTCTAGTATATGTGGATGGTC
CAAATGTTCTCTAACGTTATATATTCCAGAATCCCAGTGAAACTAAAGTT
GCACGTATAGGAACGTTATACTCAAGGACCTTCTTGATTGAAGTTGATAT
ACTTTATAATCATAGCAGTTCTTGTACATATAAGCTCTTGAATGGGTAAA
TTATGTCTCAAGATACATAAATTGTTAAAGTTTCCTTCCTTCAAGTTATA
GGGAAAGAAAAGTTGTTATCTTCAGTTTTCATCACAACCTTCCGTCGATT
AGAATTATGAGCGCGATCTCAGCGCCTGAACAGTGAATATCTGGTTTCAT
TCGGAGGATCGATACAGGACAAAATCACACTAATATTGTTGCATTTGCTG
CCTATATATCGTGAATGGCGGGAAAATCATTTGCTCATTCTGCATGTATA
TATCCGTGAATGTATATAGCTAATATATATTACCAGATGTAGATATGAGT
ACACACTACATTAATCATTATGTTCTGTCTGGTATGTAAAAACAGAGGTG
TGAAATGACCTGTCTGGCTTGTGCTGTATGCCATTGTGTTCTATTGTGTT
TTATTGATTGAAGACCTTTATTGTATGTTCGTGCCCCGAGGGGCTAGATA
CAGGTCGTTTAACACAAACCAAACTAACATCTAAGTGACATATACAGTGA
AATATGTACAGTACATTGTGTAAACATACATGGTAGAAGAAAAGGATAAG
CTAAGCTAATCTAGTAAAGTCAACTTCTTCTCGCTTCTTTGTACATGTGT
AGATGTATGAACAGATCATGTTTCTTATACAAGGGTTATCTAGACGCAAC
AAAAATATGAATTTATCCGTTGCGTTTAAATATTTTGTCTACTATCTGAT
AGACGGCAGTCTGTTATGGAAAGTTGGAAGTGTGAAATGCTCACAGTTGA
ATTCAGGAGGCTAAAGATATGAATAGTTGAATACACATTGTCTTCTGTCT
GGTTTGGCCAGAGCTGAAGTATGAAATAACCTGTGAGAGAGTGCGAATAA
AAAAAAAGTTTGGCAAAAAAAAAGTTGCCTTCCTTATGAAAAGTAAGTTG
ACAGGAAGGGTGAACAAATGGCAAAACACACAGAGTATGGTATACCACGA
ATTATATCTTCTCAGACTTTGGACTTGACTTTGGCATTCTATGCCATTAA
AATCTGTTTTCAGACACATTTTCAGATTTTGTTGCAATTTACGGTGTATA
TTTGCACATTTTGTACCTGTTTAGTGTTTTGTACGATTTATAATCTGGTC
GAAAACTTTTTTTGTGGAAACAGACAAAAATTGATGCGCACACGGATGCC
ATCCATACAATCAAATCAACATAGCCATATCTAAAAAAAGAAAAGACAAA
AAGAAACTGCTGAAAGAGAATGGCACAGTCTTAGTTAAATACTTAGGTAA
TCAAGGAGATGTAATTCAATGATACACTAAGAAAAGTTCTGTTTGTTTCC
GCTTTCAGCCCCTGCCAAGCCAAAGCCCAAGAGGAAGAAGCCCAGCCCTC
CCAAGGCCCCAAAGTGTGGCTGCAAGGGGGACTGCAGGTCAAGGTGATAA
TCATTACATCAACCCCTTGGAATTTCTGCACTATAGTAATACATGTAGTT
ATAAACATTGAAATCTATTTCACATGGAGTAGATAGGTCAGTCATTTTGC
CCCCAAGGTGATTATCATGGAGGCCTACTTGCTTGCAGCTTGATATCTGC
TTGAAAACATGTTTGTAAAAGTACAGGTCATGCAATATTCAAATTGTTAA
AAGTGCAATGTTCATAAACTCAATGTTGATCCCCATGTTTCTCAGCTGTA
AAAGTTGTATGTAGTGTATGTAGAGTTGTTTTCTACTCCAAGGAAACAGG
CAAGTCTAAATAAAAGTCAGCATAGCCTTTGTCTTTAAAAGATAAAAGTC
AGCATAGCCTTCTTCTTTAAAAGATGGAACACATAATTCATTTTTCTCTT
GTTTGTTATTATTGCAGGAAATGTGGCTGTGGAAAGAAGGGCGAGGCCTG
TGGGGACTCCTGCAAGTGTGCTGGCTGCAAAAACCCCTTCAAGATCCTCA
AGGAGTATAACATTGACTGTGTGGCAGCAGCCCAGGACAAATGTCTCATG
GACAACATCTTCAAGGTACAACAGTGCAACATGTCACTTGTACAGGCAGT
TCAGTAGCACCTTATATTAAGAAAACAAATTACACATAACACACATAAAA
TTTGAAGTGTAGACACCATTGATGTTATGACAAGCCATCTTACACTGTTT
TTGTACCCTTGTGCAGATTGAAGATCTGAGAGGCCGATTGGAGCACAGAC
TGAGAACAGAATGCTGTGGGAGGGCAGTACGGGTGTGTTGAACAGTTCAT
ATATGTCTGGTCTATGTGCCACAGTAAGAATTTATGGCCTCAGTATAAAA
CTTATACTACTGTAAATCACTTAAATATAGCGGCAGGAAAATATAGCGGT
TTGGGGGAAATGGAGTAGGTCACGGCACTTAATTTTAACGGTTTGAACAA
ACATTACTGTCTCAAATACTAGTAATCAAATATTTGTGATGATGAAATTT
TAGCGGTTGAAAAGTGACCGTTACATCAGCTAAAATTAAGTTACAGTTAA
CAAATCAAGAATTAAATGCTTCTTTTTTTAGCTACCGTTTTTGTTCTTCA
ACTGTAGAGACAAAGGTTTGTGACTTGAGCTGTACTTCTGTATCTCCACC
TCCAGCTGAAGAACATGTTGCCTGGCACCATCACCCAGTGCAACTGTCCT
GATTGTGGGCACGAGTGGCAGTACTCCTGGTGCAGTCATGAGCTTGTTGA
TTGGGAGACTCGCCCTCGCAACCACTGTGGCATCTGTCGCAGGTGTGGGG
ACTACAGGGATGCTCATTGTCAGGTAACCAAGTGTTGTGTGTTTCTAATC
TATCAGTGTCAATGTTCTCTTGCTCTACTATGCACTATATATGATAGTTC
TTGATTTAGTTCTTGTCTTACATACTCCTCATTTATGTTCATAATCTTGC
TTGAGATTATGGTAACAGCTAACACATGATTGTGGATAGCAGCATTGAAT
GGGCCATGCATTATTACTGCTACAGAATTCTAAAGCTGCATGATTTGCTC
GGCTCATAAGATTAACAATACATCTATTGCAATAGCTAGTCTTAGCATCC
CTGTTTTCTCCAAACAGAAATGCAACAAGTGCTACTTTGCCGGCATGTCT
GGTTTCGAGTGCCCATGCCAGGATCGGCGACCAAATCCAGAGGGAGACCT
GGGCTCAATGGGCATCTTCATGAAGTGGGCCATGCAGTACCTTGCTGGGG
ACGACAGCGACGGGCTCAGTGATGATTCGGAAGACGAAGGCTTCATCTAA
Coding sequence (CDS) from alignment at Sc0000235:225500..229099+ >transcript:BL95944_evm2 ID=transcript:BL95944_evm2|Name=transcript:BL95944_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=4212bp|location=Sequence derived from alignment at Sc0000235:225500..229099+ (Branchiostoma lanceolatum)
ATGGCACCCAAGCGCGCAGCTGTGGATGCTGAGCAGCAGACGGCGGGCAA
AGCCCCTGCCAAGCCAAAGCCCAAGAGGAAGAAGCCCAGCCCTCCCAAGG
CCCCAAAGTGTGGCTGCAAGGGGGACTGCAGGTCAAGGAAATGTGGCTGT
GGAAAGAAGGGCGAGGCCTGTGGGGACTCCTGCAAGTGTGCTGGCTGCAA
AAACCCCTTCAAGATCCTCAAGGAGTATAACATTGACTGTGTGGCAGCAG
CCCAGGACAAATGTCTCATGGACAACATCTTCAAGATTGAAGATCTGAGA
GGCCGATTGGAGCACAGACTGAGAACAGAATGCTGTGGGAGGGCAGTACG
GCTGAAGAACATGTTGCCTGGCACCATCACCCAGTGCAACTGTCCTGATT
GTGGGCACGAGTGGCAGTACTCCTGGTGCAGTCATGAGCTTGTTGATTGG
GAGACTCGCCCTCGCAACCACTGTGGCATCTGTCGCAGGTGTGGGGACTA
CAGGGATGCTCATTGTCAGAAATGCAACAAGTGCTACTTTGCCGGCATGT
CTGGTTTCGAGTGCCCATGCCAGGATCGGCGACCAAATCCAGAGGGAGAC
CTGGGCTCAATGGGCATCTTCATGAAGTGGGCCATGCAGTACCTTGCTGG
GGACGACAGCGACGGGCTCAGTGATGATTCGGAAGACGAAGGCTTCATCT
AAATGGCACCCAAGCGCGCAGCTGTGGATGCTGAGCAGCAGACGGCGGGC
AAAGCCCCTGCCAAGCCAAAGCCCAAGAGGAAGAAGCCCAGCCCTCCCAA
GGCCCCAAAGTGTGGCTGCAAGGGGGACTGCAGGTCAAGGAAATGTGGCT
GTGGAAAGAAGGGCGAGGCCTGTGGGGACTCCTGCAAGTGTGCTGGCTGC
AAAAACCCCTTCAAGATCCTCAAGGAGTATAACATTGACTGTGTGGCAGC
AGCCCAGGACAAATGTCTCATGGACAACATCTTCAAGATTGAAGATCTGA
GAGGCCGATTGGAGCACAGACTGAGAACAGAATGCTGTGGGAGGGCAGTA
CGGCTGAAGAACATGTTGCCTGGCACCATCACCCAGTGCAACTGTCCTGA
TTGTGGGCACGAGTGGCAGTACTCCTGGTGCAGTCATGAGCTTGTTGATT
GGGAGACTCGCCCTCGCAACCACTGTGGCATCTGTCGCAGGTGTGGGGAC
TACAGGGATGCTCATTGTCAGAAATGCAACAAGTGCTACTTTGCCGGCAT
GTCTGGTTTCGAGTGCCCATGCCAGGATCGGCGACCAAATCCAGAGGGAG
ACCTGGGCTCAATGGGCATCTTCATGAAGTGGGCCATGCAGTACCTTGCT
GGGGACGACAGCGACGGGCTCAGTGATGATTCGGAAGACGAAGGCTTCAT
CTAAATGGCACCCAAGCGCGCAGCTGTGGATGCTGAGCAGCAGACGGCGG
GCAAAGCCCCTGCCAAGCCAAAGCCCAAGAGGAAGAAGCCCAGCCCTCCC
AAGGCCCCAAAGTGTGGCTGCAAGGGGGACTGCAGGTCAAGGAAATGTGG
CTGTGGAAAGAAGGGCGAGGCCTGTGGGGACTCCTGCAAGTGTGCTGGCT
GCAAAAACCCCTTCAAGATCCTCAAGGAGTATAACATTGACTGTGTGGCA
GCAGCCCAGGACAAATGTCTCATGGACAACATCTTCAAGATTGAAGATCT
GAGAGGCCGATTGGAGCACAGACTGAGAACAGAATGCTGTGGGAGGGCAG
TACGGCTGAAGAACATGTTGCCTGGCACCATCACCCAGTGCAACTGTCCT
GATTGTGGGCACGAGTGGCAGTACTCCTGGTGCAGTCATGAGCTTGTTGA
TTGGGAGACTCGCCCTCGCAACCACTGTGGCATCTGTCGCAGGTGTGGGG
ACTACAGGGATGCTCATTGTCAGAAATGCAACAAGTGCTACTTTGCCGGC
ATGTCTGGTTTCGAGTGCCCATGCCAGGATCGGCGACCAAATCCAGAGGG
AGACCTGGGCTCAATGGGCATCTTCATGAAGTGGGCCATGCAGTACCTTG
CTGGGGACGACAGCGACGGGCTCAGTGATGATTCGGAAGACGAAGGCTTC
ATCTAAATGGCACCCAAGCGCGCAGCTGTGGATGCTGAGCAGCAGACGGC
GGGCAAAGCCCCTGCCAAGCCAAAGCCCAAGAGGAAGAAGCCCAGCCCTC
CCAAGGCCCCAAAGTGTGGCTGCAAGGGGGACTGCAGGTCAAGGAAATGT
GGCTGTGGAAAGAAGGGCGAGGCCTGTGGGGACTCCTGCAAGTGTGCTGG
CTGCAAAAACCCCTTCAAGATCCTCAAGGAGTATAACATTGACTGTGTGG
CAGCAGCCCAGGACAAATGTCTCATGGACAACATCTTCAAGATTGAAGAT
CTGAGAGGCCGATTGGAGCACAGACTGAGAACAGAATGCTGTGGGAGGGC
AGTACGGCTGAAGAACATGTTGCCTGGCACCATCACCCAGTGCAACTGTC
CTGATTGTGGGCACGAGTGGCAGTACTCCTGGTGCAGTCATGAGCTTGTT
GATTGGGAGACTCGCCCTCGCAACCACTGTGGCATCTGTCGCAGGTGTGG
GGACTACAGGGATGCTCATTGTCAGAAATGCAACAAGTGCTACTTTGCCG
GCATGTCTGGTTTCGAGTGCCCATGCCAGGATCGGCGACCAAATCCAGAG
GGAGACCTGGGCTCAATGGGCATCTTCATGAAGTGGGCCATGCAGTACCT
TGCTGGGGACGACAGCGACGGGCTCAGTGATGATTCGGAAGACGAAGGCT
TCATCTAAATGGCACCCAAGCGCGCAGCTGTGGATGCTGAGCAGCAGACG
GCGGGCAAAGCCCCTGCCAAGCCAAAGCCCAAGAGGAAGAAGCCCAGCCC
TCCCAAGGCCCCAAAGTGTGGCTGCAAGGGGGACTGCAGGTCAAGGAAAT
GTGGCTGTGGAAAGAAGGGCGAGGCCTGTGGGGACTCCTGCAAGTGTGCT
GGCTGCAAAAACCCCTTCAAGATCCTCAAGGAGTATAACATTGACTGTGT
GGCAGCAGCCCAGGACAAATGTCTCATGGACAACATCTTCAAGATTGAAG
ATCTGAGAGGCCGATTGGAGCACAGACTGAGAACAGAATGCTGTGGGAGG
GCAGTACGGCTGAAGAACATGTTGCCTGGCACCATCACCCAGTGCAACTG
TCCTGATTGTGGGCACGAGTGGCAGTACTCCTGGTGCAGTCATGAGCTTG
TTGATTGGGAGACTCGCCCTCGCAACCACTGTGGCATCTGTCGCAGGTGT
GGGGACTACAGGGATGCTCATTGTCAGAAATGCAACAAGTGCTACTTTGC
CGGCATGTCTGGTTTCGAGTGCCCATGCCAGGATCGGCGACCAAATCCAG
AGGGAGACCTGGGCTCAATGGGCATCTTCATGAAGTGGGCCATGCAGTAC
CTTGCTGGGGACGACAGCGACGGGCTCAGTGATGATTCGGAAGACGAAGG
CTTCATCTAAATGGCACCCAAGCGCGCAGCTGTGGATGCTGAGCAGCAGA
CGGCGGGCAAAGCCCCTGCCAAGCCAAAGCCCAAGAGGAAGAAGCCCAGC
CCTCCCAAGGCCCCAAAGTGTGGCTGCAAGGGGGACTGCAGGTCAAGGAA
ATGTGGCTGTGGAAAGAAGGGCGAGGCCTGTGGGGACTCCTGCAAGTGTG
CTGGCTGCAAAAACCCCTTCAAGATCCTCAAGGAGTATAACATTGACTGT
GTGGCAGCAGCCCAGGACAAATGTCTCATGGACAACATCTTCAAGATTGA
AGATCTGAGAGGCCGATTGGAGCACAGACTGAGAACAGAATGCTGTGGGA
GGGCAGTACGGCTGAAGAACATGTTGCCTGGCACCATCACCCAGTGCAAC
TGTCCTGATTGTGGGCACGAGTGGCAGTACTCCTGGTGCAGTCATGAGCT
TGTTGATTGGGAGACTCGCCCTCGCAACCACTGTGGCATCTGTCGCAGGT
GTGGGGACTACAGGGATGCTCATTGTCAGAAATGCAACAAGTGCTACTTT
GCCGGCATGTCTGGTTTCGAGTGCCCATGCCAGGATCGGCGACCAAATCC
AGAGGGAGACCTGGGCTCAATGGGCATCTTCATGAAGTGGGCCATGCAGT
ACCTTGCTGGGGACGACAGCGACGGGCTCAGTGATGATTCGGAAGACGAA
GGCTTCATCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000235 | genome | Sc0000235:225500..229099 + |
Properties
| Property Name | Value |
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| Transcript id | BL95944_evm2 |
| Biotype | protein_coding |
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