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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95917_evm2 >transcript:BL95917_evm2-protein ID=transcript:BL95917_evm2-protein|Name=transcript:BL95917_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=326bp
MPQNATLPFSQYAGYLTVNESHGRRLFYWFVESQSDPERDPLVLWLNGGP
GCSSFNGLFEENGPFSPNKDGKTLDLNPYSWNRNASVIFLESPSGVGFSY
SDTTADYTTGDRQTAQDSLNFMLKFLEKYPQFKKNKFWITGESYAGHYVP
NLASHIVDYNTVKPGSINLAGFMVGNAWTDPALDNPGATFFWWSHALISD
RTYTGINKACNYSNIGPLLTNGKQALLSSSPGRLKDECELLLAEAHTEMG
NINIYNIYVDVCLRHRDGRQLLSQLARSDSVLRKFAQRRLEAEVGKMYPC
EDDYMEKYLNRPDVIATIHAATLPYK Run BLAST on NCBI mRNA from alignment at Sc0000204:493309..496281- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95917_evm2 ID=transcript:BL95917_evm2|Name=transcript:BL95917_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2973bp|location=Sequence derived from alignment at Sc0000204:493309..496281- (Branchiostoma lanceolatum)
ATGCCACAAAACGCGACTCTCCCGTTCTCCCAGTACGCGGGTTACCTCAC
AGTGAACGAGTCTCACGGACGGAGGCTGTTCTACTGGTTTGTGGAGTCCC
AAAGCGATCCGGAAAGAGACCCACTGGTAAGAGACTGGCCTTGTACATCA
AGTGTGGAAGATGACATTACGTTCTCAGTGAGAACGTAATGTCATAACTT
CTCAGTGTAACTGTGCTTCACTTGTTTGCTAAATCCGGTTCGCTTGATTG
ACTGGTGTCTGCAGTTAGGTAAAGAATTGATAGGTGGCCTCATTGCACAA
CAGGTGTTCTAATGACAATATATTGAACGAGTCATTTATACAACGAGGTG
AGAGCTTCGCTTTATAAACTTATTCAATATAGGTTTCCCCATTTTATACA
TCTTTGCAAAGCGGAACAATTCATATTTCTAATGGCTTTAGATAAACCCT
CTATTATAAAACACACCTGTACGTATATCTACAATATATTAATACCAAGA
AGCGAGAAGAGGCCAAATTAACGTAATCATTAGATTAGTGCTAGCTTATC
ATTGTAATGTATATACATATATGTACTTGCAAACTGTTATGTTCTCTGTT
GTGACCTGTACTGAACCCAGTGGGTATGTGTGTACAATAAAGGTCTTCAT
TCATTCATTGACCATTATTACGCACCTTCTCAGGCTTACGTAAACAGGAT
AAGTAAGAAAAATATTTGTTGATTTCATGGCTATACGTAATGCGTATTGT
ATTCCCCGACGGAAATACGGACTAATCATTTTAGACCTTATATTACAGTT
TACAAGAAAGACGTTTTGGCCTCACATTTCAGCTTTCTTTTAAACTGTAG
ATCCTTCAGCGGTGCAAGCAAACGCTTCCGTTGATGGAACTCAACTTCAG
GCGTGCATTGGCGAAATGCTTGCACTCAGTGCTGCCCAGGTCAGTGTTCT
TAATCTTAATTAAAGCAATAAAACACCATCTACCAACGTTATTAAAATCT
TCCGTTCCAGGTTCTTTGGCTCAACGGAGGACCAGGCTGCTCTTCCTTCA
ACGGTTTGTTTGAGGAGAACGGGCCGTTTTCCCCCAACAAGGACGGCAAA
ACACTAGACCTGAACCCTTATTCCTGGAACAGGAATGCCAGCGTTATTTT
CCTGGAGTCTCCGAGCGGGGTTGGGTTCTCCTACTCCGACACGACCGCAG
ATTACACCACAGGCGATCGGCAGACTGCTCAAGACAGTCTCAACTTCATG
CTCAAGTTCTTGGAGAAATATCCGCAGTTCAAGAAGAACAAGTTTTGGAT
CACGGGAGAGTCGTATGCCGGTCATTACGTCCCGAACCTCGCCAGTCACA
TCGTGGATTATAATACCGTGAAACCAGGCAGTATCAACTTAGCAGGTTGT
TATTCTTATTTTTTTTCTTGCAATACAACATAGTCATAGAAGTGATGCTT
CTTATTTTGATAGCACCACTGTAACAGAACGAACAGGAAATGAAAAAAAA
AAAACACTTGTTCATGTAGGTACATAGTAAAACACACGATACTACATAAA
CGTAGCGGTATTGCTAATTCCTAACTGAAATTCCTGTTGACACATTCCTG
TACAATTCCTAGAATTCTTGCTGACTGCACACAATCAGCAATACTACACA
CAATAATATACCATTAGGCTCGCTCCTGCGGCGTCGCCAAAAACATTGAA
TAAGACGCAAACTACAAATAAAAATGCTGAGGAACGCCCATGAAACAAGG
TAGCTGGAGGTGAATCTACAGATGTGTAAGGTCAATGCGATAATTAAGTC
AAGAGTGTCGTAACAGATAACATCTAATAAACTTTGATGAAAACTCCCCA
GGGTTCATGGTGGGTAACGCGTGGACGGATCCTGCCCTGGATAACCCCGG
CGCCACGTTCTTCTGGTGGAGCCACGCCCTCATCTCTGACAGGACGTACA
CTGGCATCAACAAGGCCTGTAACTATAGCAACATCGGACCGCTCCTGACC
AATGGGAAACAGGCGTTGCTATCCTCATCACCTGGTCGTCTGAAGGATGA
GTGTGAGCTGTTACTGGCAGAAGGTAAGACTCGATGATATAAGATAGTTT
GCGTAAACTTGGTTGAGACCATTTTTGGTTGAGACAAGGATCGTGCATGG
TTTAGATAGGACCTCCTTGGATGAGACAATGGTATCAGGTCTCAGGTTTC
AACAGCAGTTTCGACTGGTTTTCATATTACTCTTTTCTGATTGCTTCTTG
TTTTTTGTTTGCTGTCTTTTTTTCTGAGACGTTTGGGCATCAGATGACCG
GAATACGGCTGCAAACAAACAATGGACAATATCATTCAGGAAACTGCTCA
CAAGCAGTAAATGACGACAATATAGACACGCCGACCTGAGACCTGTATGG
GTGGTACGAAAACTCTACAACTTGAATAGATAGTAATTAAATTAAATGAA
GTTCTACACCCGTCCAGCAGAATGCAATTGTCCTGTTGCCAATTACGGTG
GCCATATTTTAAATCTCCCAGGACCGTACACTAAAACGAGGATGCAGTTG
GTGCTCCCTATACTGTAATAGGCTTATACGAAGGGAGCACCAACTGCAGC
CTCGTTTTGGTGCACGGTCCCGGGAAATCCAAAATGGCCGCTGTAATTGG
CAAAAGGTCTATTGCATACCAACGAGGAACATTTTTTAAATTTTCTACTG
CTAACTTCCGCCTTAATTTGCCCAGCCCACACCGAGATGGGAAACATCAA
CATCTATAACATCTACGTGGACGTGTGCCTACGACACCGGGACGGACGGC
AGCTCCTGAGCCAGCTGGCCCGCTCGGACTCCGTCCTGAGGAAGTTCGCA
CAGCGCCGGCTGGAGGCGGAGGTGGGGAAGATGTACCCGTGTGAGGACGA
CTACATGGAGAAGTACCTCAACAGGCCTGACGTCATCGCTACCATCCATG
CTGCCACGCTGCCCTACAAGTAA Coding sequence (CDS) from alignment at Sc0000204:493309..496281- >transcript:BL95917_evm2 ID=transcript:BL95917_evm2|Name=transcript:BL95917_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=3924bp|location=Sequence derived from alignment at Sc0000204:493309..496281- (Branchiostoma lanceolatum)
ATGCCACAAAACGCGACTCTCCCGTTCTCCCAGTACGCGGGTTACCTCAC
AGTGAACGAGTCTCACGGACGGAGGCTGTTCTACTGGTTTGTGGAGTCCC
AAAGCGATCCGGAAAGAGACCCACTGGTTCTTTGGCTCAACGGAGGACCA
GGCTGCTCTTCCTTCAACGGTTTGTTTGAGGAGAACGGGCCGTTTTCCCC
CAACAAGGACGGCAAAACACTAGACCTGAACCCTTATTCCTGGAACAGGA
ATGCCAGCGTTATTTTCCTGGAGTCTCCGAGCGGGGTTGGGTTCTCCTAC
TCCGACACGACCGCAGATTACACCACAGGCGATCGGCAGACTGCTCAAGA
CAGTCTCAACTTCATGCTCAAGTTCTTGGAGAAATATCCGCAGTTCAAGA
AGAACAAGTTTTGGATCACGGGAGAGTCGTATGCCGGTCATTACGTCCCG
AACCTCGCCAGTCACATCGTGGATTATAATACCGTGAAACCAGGCAGTAT
CAACTTAGCAGGGTTCATGGTGGGTAACGCGTGGACGGATCCTGCCCTGG
ATAACCCCGGCGCCACGTTCTTCTGGTGGAGCCACGCCCTCATCTCTGAC
AGGACGTACACTGGCATCAACAAGGCCTGTAACTATAGCAACATCGGACC
GCTCCTGACCAATGGGAAACAGGCGTTGCTATCCTCATCACCTGGTCGTC
TGAAGGATGAGTGTGAGCTGTTACTGGCAGAAGCCCACACCGAGATGGGA
AACATCAACATCTATAACATCTACGTGGACGTGTGCCTACGACACCGGGA
CGGACGGCAGCTCCTGAGCCAGCTGGCCCGCTCGGACTCCGTCCTGAGGA
AGTTCGCACAGCGCCGGCTGGAGGCGGAGGTGGGGAAGATGTACCCGTGT
GAGGACGACTACATGGAGAAGTACCTCAACAGGCCTGACGTCATCGCTAC
CATCCATGCTGCCACGCTGCCCTACAAGTAAATGCCACAAAACGCGACTC
TCCCGTTCTCCCAGTACGCGGGTTACCTCACAGTGAACGAGTCTCACGGA
CGGAGGCTGTTCTACTGGTTTGTGGAGTCCCAAAGCGATCCGGAAAGAGA
CCCACTGGTTCTTTGGCTCAACGGAGGACCAGGCTGCTCTTCCTTCAACG
GTTTGTTTGAGGAGAACGGGCCGTTTTCCCCCAACAAGGACGGCAAAACA
CTAGACCTGAACCCTTATTCCTGGAACAGGAATGCCAGCGTTATTTTCCT
GGAGTCTCCGAGCGGGGTTGGGTTCTCCTACTCCGACACGACCGCAGATT
ACACCACAGGCGATCGGCAGACTGCTCAAGACAGTCTCAACTTCATGCTC
AAGTTCTTGGAGAAATATCCGCAGTTCAAGAAGAACAAGTTTTGGATCAC
GGGAGAGTCGTATGCCGGTCATTACGTCCCGAACCTCGCCAGTCACATCG
TGGATTATAATACCGTGAAACCAGGCAGTATCAACTTAGCAGGGTTCATG
GTGGGTAACGCGTGGACGGATCCTGCCCTGGATAACCCCGGCGCCACGTT
CTTCTGGTGGAGCCACGCCCTCATCTCTGACAGGACGTACACTGGCATCA
ACAAGGCCTGTAACTATAGCAACATCGGACCGCTCCTGACCAATGGGAAA
CAGGCGTTGCTATCCTCATCACCTGGTCGTCTGAAGGATGAGTGTGAGCT
GTTACTGGCAGAAGCCCACACCGAGATGGGAAACATCAACATCTATAACA
TCTACGTGGACGTGTGCCTACGACACCGGGACGGACGGCAGCTCCTGAGC
CAGCTGGCCCGCTCGGACTCCGTCCTGAGGAAGTTCGCACAGCGCCGGCT
GGAGGCGGAGGTGGGGAAGATGTACCCGTGTGAGGACGACTACATGGAGA
AGTACCTCAACAGGCCTGACGTCATCGCTACCATCCATGCTGCCACGCTG
CCCTACAAGTAAATGCCACAAAACGCGACTCTCCCGTTCTCCCAGTACGC
GGGTTACCTCACAGTGAACGAGTCTCACGGACGGAGGCTGTTCTACTGGT
TTGTGGAGTCCCAAAGCGATCCGGAAAGAGACCCACTGGTTCTTTGGCTC
AACGGAGGACCAGGCTGCTCTTCCTTCAACGGTTTGTTTGAGGAGAACGG
GCCGTTTTCCCCCAACAAGGACGGCAAAACACTAGACCTGAACCCTTATT
CCTGGAACAGGAATGCCAGCGTTATTTTCCTGGAGTCTCCGAGCGGGGTT
GGGTTCTCCTACTCCGACACGACCGCAGATTACACCACAGGCGATCGGCA
GACTGCTCAAGACAGTCTCAACTTCATGCTCAAGTTCTTGGAGAAATATC
CGCAGTTCAAGAAGAACAAGTTTTGGATCACGGGAGAGTCGTATGCCGGT
CATTACGTCCCGAACCTCGCCAGTCACATCGTGGATTATAATACCGTGAA
ACCAGGCAGTATCAACTTAGCAGGGTTCATGGTGGGTAACGCGTGGACGG
ATCCTGCCCTGGATAACCCCGGCGCCACGTTCTTCTGGTGGAGCCACGCC
CTCATCTCTGACAGGACGTACACTGGCATCAACAAGGCCTGTAACTATAG
CAACATCGGACCGCTCCTGACCAATGGGAAACAGGCGTTGCTATCCTCAT
CACCTGGTCGTCTGAAGGATGAGTGTGAGCTGTTACTGGCAGAAGCCCAC
ACCGAGATGGGAAACATCAACATCTATAACATCTACGTGGACGTGTGCCT
ACGACACCGGGACGGACGGCAGCTCCTGAGCCAGCTGGCCCGCTCGGACT
CCGTCCTGAGGAAGTTCGCACAGCGCCGGCTGGAGGCGGAGGTGGGGAAG
ATGTACCCGTGTGAGGACGACTACATGGAGAAGTACCTCAACAGGCCTGA
CGTCATCGCTACCATCCATGCTGCCACGCTGCCCTACAAGTAAATGCCAC
AAAACGCGACTCTCCCGTTCTCCCAGTACGCGGGTTACCTCACAGTGAAC
GAGTCTCACGGACGGAGGCTGTTCTACTGGTTTGTGGAGTCCCAAAGCGA
TCCGGAAAGAGACCCACTGGTTCTTTGGCTCAACGGAGGACCAGGCTGCT
CTTCCTTCAACGGTTTGTTTGAGGAGAACGGGCCGTTTTCCCCCAACAAG
GACGGCAAAACACTAGACCTGAACCCTTATTCCTGGAACAGGAATGCCAG
CGTTATTTTCCTGGAGTCTCCGAGCGGGGTTGGGTTCTCCTACTCCGACA
CGACCGCAGATTACACCACAGGCGATCGGCAGACTGCTCAAGACAGTCTC
AACTTCATGCTCAAGTTCTTGGAGAAATATCCGCAGTTCAAGAAGAACAA
GTTTTGGATCACGGGAGAGTCGTATGCCGGTCATTACGTCCCGAACCTCG
CCAGTCACATCGTGGATTATAATACCGTGAAACCAGGCAGTATCAACTTA
GCAGGGTTCATGGTGGGTAACGCGTGGACGGATCCTGCCCTGGATAACCC
CGGCGCCACGTTCTTCTGGTGGAGCCACGCCCTCATCTCTGACAGGACGT
ACACTGGCATCAACAAGGCCTGTAACTATAGCAACATCGGACCGCTCCTG
ACCAATGGGAAACAGGCGTTGCTATCCTCATCACCTGGTCGTCTGAAGGA
TGAGTGTGAGCTGTTACTGGCAGAAGCCCACACCGAGATGGGAAACATCA
ACATCTATAACATCTACGTGGACGTGTGCCTACGACACCGGGACGGACGG
CAGCTCCTGAGCCAGCTGGCCCGCTCGGACTCCGTCCTGAGGAAGTTCGC
ACAGCGCCGGCTGGAGGCGGAGGTGGGGAAGATGTACCCGTGTGAGGACG
ACTACATGGAGAAGTACCTCAACAGGCCTGACGTCATCGCTACCATCCAT
GCTGCCACGCTGCCCTACAAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000204 | genome | Sc0000204:493309..496281 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95917_evm2 |
| Biotype | protein_coding |
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