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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95912_evm0 >transcript:BL95912_evm0-protein ID=transcript:BL95912_evm0-protein|Name=transcript:BL95912_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=360bp
MDVRQPGGAVLLVFAALLVISRPPPVGAAPALDPQKELRVLNNLIGKVEK
TMSVVGRGTKTLDKILTDMESRFDALLQNVTRLEQQRDGLMELSDSCGLN
DAPLAGDGSTAAREADDEGVTAGPATTAEAPRVKDCEELLPYGLTQSGVY
TIYVDNRPVRVFCRLEDGVDAWTVIQRRQDGSVNFNRSWADYKTGFGDPA
VEYWLGNEVIHQITNSGDYYTLYIYMEDWDPEDGDPPRHIQFDEFYLDSA
ATGYKLRLNLLRGGNIQNAMYYNTGQPFTTYDRDNGGYGANCAKRYGGGW
WYYGHACVYANLNGNYVQGGHTQNGVGLVWLYWRSPDWYSAKVTEMRIMK
RDASIPVRQP Run BLAST on NCBI mRNA from alignment at Sc0000202:291424..294040- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95912_evm0 ID=transcript:BL95912_evm0|Name=transcript:BL95912_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2617bp|location=Sequence derived from alignment at Sc0000202:291424..294040- (Branchiostoma lanceolatum)
ATGGATGTACGGCAGCCCGGAGGAGCCGTCCTACTGGTGTTCGCGGCTCT
TCTCGTGATCTCTCGGCCGCCCCCGGTCGGTGCCGCTCCTGCTCTGGACC
CACAGAAGGAGCTTCGTGTCCTGAACAGTGAGTAACCATGAATTATGTGC
CTGCAACACAACTGGTAGCAGCCTCTAGCCTCTACCAGTCTCCGCGGGTC
GCTGGGAAAATAGTAGAAATTGGCCAAATAGAGTCAATTGTATGAAGGGA
GTCGGCTACGGAGAGAGTCCCCCCGGCAAATGTTCTCCCTGTAGCCGGCG
TAGTTAGTCTGGTAGAGACTAAGCAGCCTCACAGTTAGGCTCCTGCATGG
CTCCAATTAGTTGATAACTGTGAGACCCCGGTTCGAATCCTCGGAAGGCC
CCTCGACTGATTACAACTACTCTGCAAAATTGCCGCCTTCATCTGCTGTT
CTTCCTCCCGCGTACAGATCTAATAGGAAAGGTGGAAAAGACCATGTCCG
TGGTGGGGCGCGGAACCAAAACACTGGACAAGATACTGACTGACATGGAA
TCGAGGTTCGATGCGCTACTCCGTGAGTCCCACTTTTCTTTACTTTGTCT
TAAGAAGTAATCTTAACTATAGATTAAACACGAGGTAAGCCCTTATGTTC
GCATGAGCTTGCGTAAATAATGTATTAAACGTTTTCGAAAGGAAATATAA
AGATTAACATATATCCTACAAGCATAATTTATTCATAATTGTGTATTGAG
ATTTAAAGCACATCTATGGAAGGATTTACAGAATATGTGACAATCACATT
TTCAAGATGTCAGATCAGACTGTAAGGTTTTGGAACCCAACTTTCTTCAA
CTGATGGCGTCTTATGTGTTTTCGCAGTCTGATATTGTTTAATCAAATCT
TCTTGGATACTTTGTGACAATCTGACAGAAAACGTGACACGTCTTGAGCA
GCAGCGCGATGGGCTGATGGAACTGTCCGACAGTTGTGGACTTAACGACG
CGCCCCTTGCGGGGGATGGTAGCACTGCAGCAAGAGAAGCAGACGACGAA
GGGGTAACAGCAGGGCCAGCCACGACAGCGGAAGCACCACGTGTCAAAGG
TACAGTAGTAGCGTATTGGACAAACTCTCTAGCTGTTGTGAAAGGCCAAA
CCTCTTGTACTGCTGGCTGCACCAGGCAAAACTAGCCTCTGTTACAAAGC
CTTTTTTTACTTTGTCTATAGACGGGATTATGTTCTGATTTAGCTCTAGA
CAGCTACAACTAGCAATCAGACATAGGTAAGTAATTAGAATTCGGTAGCT
ATCAGAAAATTGTGCATATTTGAAAAAAAATTGTTTTACTGAAATTTCCT
ACCCATTAGATGCAATGTAACGTTATGAGATGTCAGCATTACCCTAAGAC
CGAAAACATAGCAGAACCTGTTACAAAGTACATAGTGTGTGCTTTTATTT
CCTAAACTTATTCCCCAGACTGTGAAGAGTTGCTGCCCTATGGGTTGACA
CAAAGCGGTGTGTACACCATCTATGTCGACAACCGGCCAGTGAGGGTCTT
CTGTCGCCTCGAGGACGGGGTGGATGCCTGGACCGTCATCCAGCGGCGCC
AGGACGGGTCCGTCAACTTCAACCGCTCCTGGGCCGACTACAAGACTGGG
TTCGGGGACCCCGCGGTGGAATACTGGCTGGGGAACGAGGTCATCCACCA
GATCACGAACAGCGGGGACTACTACACGCTGTACATTTACATGGAGGACT
GGGATCCGGAGGATGGGGATCCTCCCCGCCACATTCAGTTCGATGAGTTC
TACCTGGACAGCGCGGCGACCGGCTACAAGCTGCGACTGAACCTCCTCCG
TGGCGGAAACATCCAGAACGCGATGTACTACAACACCGGACAACCCTTCA
CCACGTACGACCGAGATAATGGCGGATATGGAGCCAACTGCGCCAAGGTG
AGTGATTTATCATTGATTGATCACCATCATCATCCTCAACAGCATCACCA
ACATCATCGTCATCAAAATCATCGTCACATTCAATATTATCGTCATCATC
ATCATCAACGTCATTGCCATCGTCTTCATCAATGTTATCGCCATCATCAT
CGTCATCATTACCATGACCCCATTTCAGCACCGTGATTTCAGAGTATACT
GATAGCGACGGGCCGTCATTATGATTCACCATTGTCTCTAGCTCTTATCT
GTTGATAATCGCAGCCTGGCTCTTTGCAGAAATGTGTCTTCTGTTTCACC
AACCTTGCTTAGCTATGATTCTTTACCTGGTCGTCGCTATCTTATTCTTT
CTGATTCAACGAATGTTTTTGTTTGTAAATGGGCCTATTAAAATGGGATT
ATGACTATGTACTAATATCCTAGGAGTTTAGATTTCTGTATTTACATGTG
TTTGTTAATCCTTTAGAGGTACGGTGGAGGGTGGTGGTACTACGGCCACG
CCTGTGTGTACGCCAACCTGAATGGGAACTACGTGCAGGGCGGACACACC
CAGAACGGGGTCGGGCTGGTGTGGCTCTACTGGCGCTCCCCTGACTGGTA
CTCCGCTAAGGTCACCGAGATGAGGATCATGAAGCGCGATGCCAGCATCC
CTGTGCGCCAGCCTTAG Coding sequence (CDS) from alignment at Sc0000202:291424..294040- >transcript:BL95912_evm0 ID=transcript:BL95912_evm0|Name=transcript:BL95912_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=5415bp|location=Sequence derived from alignment at Sc0000202:291424..294040- (Branchiostoma lanceolatum)
ATGGATGTACGGCAGCCCGGAGGAGCCGTCCTACTGGTGTTCGCGGCTCT
TCTCGTGATCTCTCGGCCGCCCCCGGTCGGTGCCGCTCCTGCTCTGGACC
CACAGAAGGAGCTTCGTGTCCTGAACAATCTAATAGGAAAGGTGGAAAAG
ACCATGTCCGTGGTGGGGCGCGGAACCAAAACACTGGACAAGATACTGAC
TGACATGGAATCGAGGTTCGATGCGCTACTCCAAAACGTGACACGTCTTG
AGCAGCAGCGCGATGGGCTGATGGAACTGTCCGACAGTTGTGGACTTAAC
GACGCGCCCCTTGCGGGGGATGGTAGCACTGCAGCAAGAGAAGCAGACGA
CGAAGGGGTAACAGCAGGGCCAGCCACGACAGCGGAAGCACCACGTGTCA
AAGACTGTGAAGAGTTGCTGCCCTATGGGTTGACACAAAGCGGTGTGTAC
ACCATCTATGTCGACAACCGGCCAGTGAGGGTCTTCTGTCGCCTCGAGGA
CGGGGTGGATGCCTGGACCGTCATCCAGCGGCGCCAGGACGGGTCCGTCA
ACTTCAACCGCTCCTGGGCCGACTACAAGACTGGGTTCGGGGACCCCGCG
GTGGAATACTGGCTGGGGAACGAGGTCATCCACCAGATCACGAACAGCGG
GGACTACTACACGCTGTACATTTACATGGAGGACTGGGATCCGGAGGATG
GGGATCCTCCCCGCCACATTCAGTTCGATGAGTTCTACCTGGACAGCGCG
GCGACCGGCTACAAGCTGCGACTGAACCTCCTCCGTGGCGGAAACATCCA
GAACGCGATGTACTACAACACCGGACAACCCTTCACCACGTACGACCGAG
ATAATGGCGGATATGGAGCCAACTGCGCCAAGAGGTACGGTGGAGGGTGG
TGGTACTACGGCCACGCCTGTGTGTACGCCAACCTGAATGGGAACTACGT
GCAGGGCGGACACACCCAGAACGGGGTCGGGCTGGTGTGGCTCTACTGGC
GCTCCCCTGACTGGTACTCCGCTAAGGTCACCGAGATGAGGATCATGAAG
CGCGATGCCAGCATCCCTGTGCGCCAGCCTTAGATGGATGTACGGCAGCC
CGGAGGAGCCGTCCTACTGGTGTTCGCGGCTCTTCTCGTGATCTCTCGGC
CGCCCCCGGTCGGTGCCGCTCCTGCTCTGGACCCACAGAAGGAGCTTCGT
GTCCTGAACAATCTAATAGGAAAGGTGGAAAAGACCATGTCCGTGGTGGG
GCGCGGAACCAAAACACTGGACAAGATACTGACTGACATGGAATCGAGGT
TCGATGCGCTACTCCAAAACGTGACACGTCTTGAGCAGCAGCGCGATGGG
CTGATGGAACTGTCCGACAGTTGTGGACTTAACGACGCGCCCCTTGCGGG
GGATGGTAGCACTGCAGCAAGAGAAGCAGACGACGAAGGGGTAACAGCAG
GGCCAGCCACGACAGCGGAAGCACCACGTGTCAAAGACTGTGAAGAGTTG
CTGCCCTATGGGTTGACACAAAGCGGTGTGTACACCATCTATGTCGACAA
CCGGCCAGTGAGGGTCTTCTGTCGCCTCGAGGACGGGGTGGATGCCTGGA
CCGTCATCCAGCGGCGCCAGGACGGGTCCGTCAACTTCAACCGCTCCTGG
GCCGACTACAAGACTGGGTTCGGGGACCCCGCGGTGGAATACTGGCTGGG
GAACGAGGTCATCCACCAGATCACGAACAGCGGGGACTACTACACGCTGT
ACATTTACATGGAGGACTGGGATCCGGAGGATGGGGATCCTCCCCGCCAC
ATTCAGTTCGATGAGTTCTACCTGGACAGCGCGGCGACCGGCTACAAGCT
GCGACTGAACCTCCTCCGTGGCGGAAACATCCAGAACGCGATGTACTACA
ACACCGGACAACCCTTCACCACGTACGACCGAGATAATGGCGGATATGGA
GCCAACTGCGCCAAGAGGTACGGTGGAGGGTGGTGGTACTACGGCCACGC
CTGTGTGTACGCCAACCTGAATGGGAACTACGTGCAGGGCGGACACACCC
AGAACGGGGTCGGGCTGGTGTGGCTCTACTGGCGCTCCCCTGACTGGTAC
TCCGCTAAGGTCACCGAGATGAGGATCATGAAGCGCGATGCCAGCATCCC
TGTGCGCCAGCCTTAGATGGATGTACGGCAGCCCGGAGGAGCCGTCCTAC
TGGTGTTCGCGGCTCTTCTCGTGATCTCTCGGCCGCCCCCGGTCGGTGCC
GCTCCTGCTCTGGACCCACAGAAGGAGCTTCGTGTCCTGAACAATCTAAT
AGGAAAGGTGGAAAAGACCATGTCCGTGGTGGGGCGCGGAACCAAAACAC
TGGACAAGATACTGACTGACATGGAATCGAGGTTCGATGCGCTACTCCAA
AACGTGACACGTCTTGAGCAGCAGCGCGATGGGCTGATGGAACTGTCCGA
CAGTTGTGGACTTAACGACGCGCCCCTTGCGGGGGATGGTAGCACTGCAG
CAAGAGAAGCAGACGACGAAGGGGTAACAGCAGGGCCAGCCACGACAGCG
GAAGCACCACGTGTCAAAGACTGTGAAGAGTTGCTGCCCTATGGGTTGAC
ACAAAGCGGTGTGTACACCATCTATGTCGACAACCGGCCAGTGAGGGTCT
TCTGTCGCCTCGAGGACGGGGTGGATGCCTGGACCGTCATCCAGCGGCGC
CAGGACGGGTCCGTCAACTTCAACCGCTCCTGGGCCGACTACAAGACTGG
GTTCGGGGACCCCGCGGTGGAATACTGGCTGGGGAACGAGGTCATCCACC
AGATCACGAACAGCGGGGACTACTACACGCTGTACATTTACATGGAGGAC
TGGGATCCGGAGGATGGGGATCCTCCCCGCCACATTCAGTTCGATGAGTT
CTACCTGGACAGCGCGGCGACCGGCTACAAGCTGCGACTGAACCTCCTCC
GTGGCGGAAACATCCAGAACGCGATGTACTACAACACCGGACAACCCTTC
ACCACGTACGACCGAGATAATGGCGGATATGGAGCCAACTGCGCCAAGAG
GTACGGTGGAGGGTGGTGGTACTACGGCCACGCCTGTGTGTACGCCAACC
TGAATGGGAACTACGTGCAGGGCGGACACACCCAGAACGGGGTCGGGCTG
GTGTGGCTCTACTGGCGCTCCCCTGACTGGTACTCCGCTAAGGTCACCGA
GATGAGGATCATGAAGCGCGATGCCAGCATCCCTGTGCGCCAGCCTTAGA
TGGATGTACGGCAGCCCGGAGGAGCCGTCCTACTGGTGTTCGCGGCTCTT
CTCGTGATCTCTCGGCCGCCCCCGGTCGGTGCCGCTCCTGCTCTGGACCC
ACAGAAGGAGCTTCGTGTCCTGAACAATCTAATAGGAAAGGTGGAAAAGA
CCATGTCCGTGGTGGGGCGCGGAACCAAAACACTGGACAAGATACTGACT
GACATGGAATCGAGGTTCGATGCGCTACTCCAAAACGTGACACGTCTTGA
GCAGCAGCGCGATGGGCTGATGGAACTGTCCGACAGTTGTGGACTTAACG
ACGCGCCCCTTGCGGGGGATGGTAGCACTGCAGCAAGAGAAGCAGACGAC
GAAGGGGTAACAGCAGGGCCAGCCACGACAGCGGAAGCACCACGTGTCAA
AGACTGTGAAGAGTTGCTGCCCTATGGGTTGACACAAAGCGGTGTGTACA
CCATCTATGTCGACAACCGGCCAGTGAGGGTCTTCTGTCGCCTCGAGGAC
GGGGTGGATGCCTGGACCGTCATCCAGCGGCGCCAGGACGGGTCCGTCAA
CTTCAACCGCTCCTGGGCCGACTACAAGACTGGGTTCGGGGACCCCGCGG
TGGAATACTGGCTGGGGAACGAGGTCATCCACCAGATCACGAACAGCGGG
GACTACTACACGCTGTACATTTACATGGAGGACTGGGATCCGGAGGATGG
GGATCCTCCCCGCCACATTCAGTTCGATGAGTTCTACCTGGACAGCGCGG
CGACCGGCTACAAGCTGCGACTGAACCTCCTCCGTGGCGGAAACATCCAG
AACGCGATGTACTACAACACCGGACAACCCTTCACCACGTACGACCGAGA
TAATGGCGGATATGGAGCCAACTGCGCCAAGAGGTACGGTGGAGGGTGGT
GGTACTACGGCCACGCCTGTGTGTACGCCAACCTGAATGGGAACTACGTG
CAGGGCGGACACACCCAGAACGGGGTCGGGCTGGTGTGGCTCTACTGGCG
CTCCCCTGACTGGTACTCCGCTAAGGTCACCGAGATGAGGATCATGAAGC
GCGATGCCAGCATCCCTGTGCGCCAGCCTTAGATGGATGTACGGCAGCCC
GGAGGAGCCGTCCTACTGGTGTTCGCGGCTCTTCTCGTGATCTCTCGGCC
GCCCCCGGTCGGTGCCGCTCCTGCTCTGGACCCACAGAAGGAGCTTCGTG
TCCTGAACAATCTAATAGGAAAGGTGGAAAAGACCATGTCCGTGGTGGGG
CGCGGAACCAAAACACTGGACAAGATACTGACTGACATGGAATCGAGGTT
CGATGCGCTACTCCAAAACGTGACACGTCTTGAGCAGCAGCGCGATGGGC
TGATGGAACTGTCCGACAGTTGTGGACTTAACGACGCGCCCCTTGCGGGG
GATGGTAGCACTGCAGCAAGAGAAGCAGACGACGAAGGGGTAACAGCAGG
GCCAGCCACGACAGCGGAAGCACCACGTGTCAAAGACTGTGAAGAGTTGC
TGCCCTATGGGTTGACACAAAGCGGTGTGTACACCATCTATGTCGACAAC
CGGCCAGTGAGGGTCTTCTGTCGCCTCGAGGACGGGGTGGATGCCTGGAC
CGTCATCCAGCGGCGCCAGGACGGGTCCGTCAACTTCAACCGCTCCTGGG
CCGACTACAAGACTGGGTTCGGGGACCCCGCGGTGGAATACTGGCTGGGG
AACGAGGTCATCCACCAGATCACGAACAGCGGGGACTACTACACGCTGTA
CATTTACATGGAGGACTGGGATCCGGAGGATGGGGATCCTCCCCGCCACA
TTCAGTTCGATGAGTTCTACCTGGACAGCGCGGCGACCGGCTACAAGCTG
CGACTGAACCTCCTCCGTGGCGGAAACATCCAGAACGCGATGTACTACAA
CACCGGACAACCCTTCACCACGTACGACCGAGATAATGGCGGATATGGAG
CCAACTGCGCCAAGAGGTACGGTGGAGGGTGGTGGTACTACGGCCACGCC
TGTGTGTACGCCAACCTGAATGGGAACTACGTGCAGGGCGGACACACCCA
GAACGGGGTCGGGCTGGTGTGGCTCTACTGGCGCTCCCCTGACTGGTACT
CCGCTAAGGTCACCGAGATGAGGATCATGAAGCGCGATGCCAGCATCCCT
GTGCGCCAGCCTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000202 | genome | Sc0000202:291424..294040 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95912_evm0 |
| Biotype | protein_coding |
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