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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95900_evm0 >transcript:BL95900_evm0-protein ID=transcript:BL95900_evm0-protein|Name=transcript:BL95900_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=247bp
MRFFVFLALVSYAAAQGYEDRIVGGSEATPGAFPWQVSLQQNGYHFCGGT
LLNSQWVLSAAHCQMSASSMTVVAGDHDLSRNEGTEQSRRVQQVIPHPSY
NDNTLNNDIMLIKLSSPVTLNSRVSPASLPSSMVADGTMVTVTGWGNTRA
SGSNYPDRLQKVDVPVVSRSTCNAANAYGGEVTAKMFCAGYMDGGKDSCQ
GDSGGPVVRSGTVYGVVSWGYGCAQRNYPGVYAKVNRFTSWINGYIN Run BLAST on NCBI mRNA from alignment at Sc0000201:112225..115225+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95900_evm0 ID=transcript:BL95900_evm0|Name=transcript:BL95900_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3001bp|location=Sequence derived from alignment at Sc0000201:112225..115225+ (Branchiostoma lanceolatum)
ATGCGCTTTTTCGTCTTCCTCGCTCTTGTCTCTTACGCTGGTAGGTAGCA
TTTTGTCCTTTCGTCGGTGTACCACTGACACTGTCAATAACCTTTCCCCG
AATTTGATAAATTTCAAAATTGCCAGAGAGTTGAGCGCCCGACAATGTAC
CCTATCACATTAGATAGGGCTCGATGACCTGTGAGCATCGGCATATCCCT
AAAAATTGTGCAGCAATAAAGAAGACATCGACCGTACTGCAGCCAAAAAT
GTCCATCAGACATCACAGACTTGTTAGGCGAGTCATTTTTTTCTGCTGTG
TGCATGTGACGTCGACATTCGGAGAGAAGATTTTTGTTTAAGGCCCTGCC
ATATGGTGTCTAGCTAGACATGTATGCAACTTACCTTGGTAATTCTTAAT
TTTTACTAATTGCTACTAGTTTTCCAAAAGAAAAGTAGTTGATTGATTGA
TTGATTGAAAACAGAAAAAAATGAACCGTTTGTACATTTTCTACACGGTT
AGAGATGGTCATGAAATTTCTGTATCAAGATGATTTTTTAGATCTTTCAA
TGCAATCATCACAATTGAGCCATATATGACAGTAACATTTCTTATTGAAC
TAATGAATTGAAATGACTTCTGCTCAGTCAGATTGACAGCGATAAAAAAG
GTCGTAAACGAAGAAACCTTAAGATTTAGACACTAGCTCAGTACCTAGCT
ATGTACAAACTTAAAGATAGAAGATGACAAAATGTTTGTGGCAGTTTTAA
AAGCTGAATATCTACTGCACATAAGTGCATGATTCAAGCTCCTTGATTAT
GCTTGTTGAGTTGAAAATTCCTTCTCTCCAGCGGCGCAGGGTTATGAAGA
CCGCATTGTCGGCGGGTCGGAGGCGACCCCAGGTGCCTTCCCGTGGCAGG
TGTCTCTGCAACAGAACGGCTATCACTTTTGTGGCGGCACGCTCCTCAAC
AGCCAGTGGGTTCTCAGCGCTGCTCACTGCCAAATGAGGTACTGAAGGTC
CTTATAACACTTTTTTCCTGTGTATTTCTCACATGTAGTCCATGTTGATT
CAATTATATGGATGACATCCTGACCTCTGGGAACCCCGAAACTAATTCGA
GTGTGAATAAGAAAAAAAGTTTGCCTTCAGTATGAAAAGTTGTCAGGAAG
GTTGAACATATGACTAAACACACAGAGTATGTGTGTATGGCATACTAAAC
AACAGATTCTTCATTTTGTTCTTTTACATCTTCTTCTTTGACTTTGGAAT
TGACTTTGAGAATTCTACAACATGTGTTGAATGTCCGTTTACGGAATATG
TTGCTGTCGACAGTGCTAGTAGCATGACTGTAGTTGCCGGAGATCACGAC
TTGAGCAGAAACGAGGGCACCGAACAGAGTCGTCGGGTACAACAGGTCAT
ACCACACCCAAGTAAGCGTATATTGTGCATCATTACTATTATAAGTAAGA
AGTTATGAAGTAATATGTCCTGCTGTGGTTCATGAAGATGCAAACAGGGC
ACATTGAGATTATTTTGCAATTAACTTGTTCTGAACTGAAAACAAATTCA
ATCAATATGTGCAGTTTGCATACAATGTATGCAGACTCATACTGAGTGCA
TTCTGCATAGAGTGTTGTGTTCACTGCTGATCTCCTTGTCTAGGCTACAA
CGACAACACCCTTAACAACGACATCATGCTCATCAAGCTCAGCTCTCCCG
TCACTCTGAACTCCCGGGTCAGCCCGGCGTCCCTGCCATCCTCCATGGTT
GCCGACGGGACCATGGTCACTGTCACCGGCTGGGGAAACACCCGTGCCAG
TGGATGTAAGTACCGGTATCTTATGGACTCACCTTTGCTTAGGAAGATAA
GTGCAGCCATTGTAGTACAATTTCCTGTAGTGCCGTTGTATCCTCCTAGA
AAATGTTTAACGGCACCCAGGGGAAATCCTGTAAATGGATTTAATTTCAT
GTGAACTTAATTTCACGTTTGGTTGAGGCAAAGATTTTTCGCGGTCCAAA
CAATTGTGCGAAGTTGTGCAACGTGCTTTGAGCTCTCGGTGGATAGGTCA
CTACGATGATTAACATGCAGTGAGCTTAAAATCATCGCGACTATATATTT
ATCGCATTACGGTATCCCAAGCACACCGTGGCTTACCTAGTAGGTTATCG
CTGACAGATCTATCAAGGTATTGCTGCCAAGGGGCGTCATCGTTCAGTGT
GGCTATGTACTGGTTGCTGTTCATTGTCGTTGCTTTTTCTGTGTAATCGT
TGCCAGACAGTGTGTGGACAGGAGTGGATGCTGTGAACTATGATTGTTTT
TGCTGTAAGTGCTGATGTGTGACATTACTATTCACTCCTTTTCCCCTGAT
CCAACTTCCAGCTAACTACCCGGACAGGCTACAAAAGGTCGATGTGCCCG
TCGTCTCCCGATCCACCTGCAATGCTGCTAACGCTTACGGCGGAGAGGTC
ACGGCCAAAATGTTCTGTGCCGGCTACATGGATGGCGGCAAGGACTCCTG
CCAGGTAACGCAATTCTGTTGTAGAAAACTTTAGCTTGTATCTAAGAAAC
CATGTTTGTCCCTTTCTGTGACGTCTCTGTCTCCAGGTTATGACATAAGA
TGATACAATGATACGTGACAGTGAACATCGCACATCCCCAAATATCGTAA
GCTAGCGGATGGAGATAAATAATTCCAATTTTATAGGATGTTAGAATACA
TAAACTGCCCATGTCACATACAGATGCTTGAAGTATCAAAGAGGAAAATT
TGAAATTCAAATTTATACTAGATTTGTCAGACTTTTGTTAACCTGTGTAA
AGTCCTTAACAGACATCGATCGACTAACGAACATGTTTGATGCTGATGTT
TGTGTAGGGAGACAGCGGCGGTCCCGTGGTGAGATCCGGTACGGTCTACG
GCGTAGTGAGCTGGGGCTACGGTTGTGCCCAGCGTAACTACCCGGGTGTC
TACGCCAAGGTGAACAGATTCACCAGCTGGATCAACGGTTACATCAATTA
A Coding sequence (CDS) from alignment at Sc0000201:112225..115225+ >transcript:BL95900_evm0 ID=transcript:BL95900_evm0|Name=transcript:BL95900_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=4464bp|location=Sequence derived from alignment at Sc0000201:112225..115225+ (Branchiostoma lanceolatum)
ATGCGCTTTTTCGTCTTCCTCGCTCTTGTCTCTTACGCTGCGGCGCAGGG
TTATGAAGACCGCATTGTCGGCGGGTCGGAGGCGACCCCAGGTGCCTTCC
CGTGGCAGGTGTCTCTGCAACAGAACGGCTATCACTTTTGTGGCGGCACG
CTCCTCAACAGCCAGTGGGTTCTCAGCGCTGCTCACTGCCAAATGAGTGC
TAGTAGCATGACTGTAGTTGCCGGAGATCACGACTTGAGCAGAAACGAGG
GCACCGAACAGAGTCGTCGGGTACAACAGGTCATACCACACCCAAGCTAC
AACGACAACACCCTTAACAACGACATCATGCTCATCAAGCTCAGCTCTCC
CGTCACTCTGAACTCCCGGGTCAGCCCGGCGTCCCTGCCATCCTCCATGG
TTGCCGACGGGACCATGGTCACTGTCACCGGCTGGGGAAACACCCGTGCC
AGTGGATCTAACTACCCGGACAGGCTACAAAAGGTCGATGTGCCCGTCGT
CTCCCGATCCACCTGCAATGCTGCTAACGCTTACGGCGGAGAGGTCACGG
CCAAAATGTTCTGTGCCGGCTACATGGATGGCGGCAAGGACTCCTGCCAG
GGAGACAGCGGCGGTCCCGTGGTGAGATCCGGTACGGTCTACGGCGTAGT
GAGCTGGGGCTACGGTTGTGCCCAGCGTAACTACCCGGGTGTCTACGCCA
AGGTGAACAGATTCACCAGCTGGATCAACGGTTACATCAATTAAATGCGC
TTTTTCGTCTTCCTCGCTCTTGTCTCTTACGCTGCGGCGCAGGGTTATGA
AGACCGCATTGTCGGCGGGTCGGAGGCGACCCCAGGTGCCTTCCCGTGGC
AGGTGTCTCTGCAACAGAACGGCTATCACTTTTGTGGCGGCACGCTCCTC
AACAGCCAGTGGGTTCTCAGCGCTGCTCACTGCCAAATGAGTGCTAGTAG
CATGACTGTAGTTGCCGGAGATCACGACTTGAGCAGAAACGAGGGCACCG
AACAGAGTCGTCGGGTACAACAGGTCATACCACACCCAAGCTACAACGAC
AACACCCTTAACAACGACATCATGCTCATCAAGCTCAGCTCTCCCGTCAC
TCTGAACTCCCGGGTCAGCCCGGCGTCCCTGCCATCCTCCATGGTTGCCG
ACGGGACCATGGTCACTGTCACCGGCTGGGGAAACACCCGTGCCAGTGGA
TCTAACTACCCGGACAGGCTACAAAAGGTCGATGTGCCCGTCGTCTCCCG
ATCCACCTGCAATGCTGCTAACGCTTACGGCGGAGAGGTCACGGCCAAAA
TGTTCTGTGCCGGCTACATGGATGGCGGCAAGGACTCCTGCCAGGGAGAC
AGCGGCGGTCCCGTGGTGAGATCCGGTACGGTCTACGGCGTAGTGAGCTG
GGGCTACGGTTGTGCCCAGCGTAACTACCCGGGTGTCTACGCCAAGGTGA
ACAGATTCACCAGCTGGATCAACGGTTACATCAATTAAATGCGCTTTTTC
GTCTTCCTCGCTCTTGTCTCTTACGCTGCGGCGCAGGGTTATGAAGACCG
CATTGTCGGCGGGTCGGAGGCGACCCCAGGTGCCTTCCCGTGGCAGGTGT
CTCTGCAACAGAACGGCTATCACTTTTGTGGCGGCACGCTCCTCAACAGC
CAGTGGGTTCTCAGCGCTGCTCACTGCCAAATGAGTGCTAGTAGCATGAC
TGTAGTTGCCGGAGATCACGACTTGAGCAGAAACGAGGGCACCGAACAGA
GTCGTCGGGTACAACAGGTCATACCACACCCAAGCTACAACGACAACACC
CTTAACAACGACATCATGCTCATCAAGCTCAGCTCTCCCGTCACTCTGAA
CTCCCGGGTCAGCCCGGCGTCCCTGCCATCCTCCATGGTTGCCGACGGGA
CCATGGTCACTGTCACCGGCTGGGGAAACACCCGTGCCAGTGGATCTAAC
TACCCGGACAGGCTACAAAAGGTCGATGTGCCCGTCGTCTCCCGATCCAC
CTGCAATGCTGCTAACGCTTACGGCGGAGAGGTCACGGCCAAAATGTTCT
GTGCCGGCTACATGGATGGCGGCAAGGACTCCTGCCAGGGAGACAGCGGC
GGTCCCGTGGTGAGATCCGGTACGGTCTACGGCGTAGTGAGCTGGGGCTA
CGGTTGTGCCCAGCGTAACTACCCGGGTGTCTACGCCAAGGTGAACAGAT
TCACCAGCTGGATCAACGGTTACATCAATTAAATGCGCTTTTTCGTCTTC
CTCGCTCTTGTCTCTTACGCTGCGGCGCAGGGTTATGAAGACCGCATTGT
CGGCGGGTCGGAGGCGACCCCAGGTGCCTTCCCGTGGCAGGTGTCTCTGC
AACAGAACGGCTATCACTTTTGTGGCGGCACGCTCCTCAACAGCCAGTGG
GTTCTCAGCGCTGCTCACTGCCAAATGAGTGCTAGTAGCATGACTGTAGT
TGCCGGAGATCACGACTTGAGCAGAAACGAGGGCACCGAACAGAGTCGTC
GGGTACAACAGGTCATACCACACCCAAGCTACAACGACAACACCCTTAAC
AACGACATCATGCTCATCAAGCTCAGCTCTCCCGTCACTCTGAACTCCCG
GGTCAGCCCGGCGTCCCTGCCATCCTCCATGGTTGCCGACGGGACCATGG
TCACTGTCACCGGCTGGGGAAACACCCGTGCCAGTGGATCTAACTACCCG
GACAGGCTACAAAAGGTCGATGTGCCCGTCGTCTCCCGATCCACCTGCAA
TGCTGCTAACGCTTACGGCGGAGAGGTCACGGCCAAAATGTTCTGTGCCG
GCTACATGGATGGCGGCAAGGACTCCTGCCAGGGAGACAGCGGCGGTCCC
GTGGTGAGATCCGGTACGGTCTACGGCGTAGTGAGCTGGGGCTACGGTTG
TGCCCAGCGTAACTACCCGGGTGTCTACGCCAAGGTGAACAGATTCACCA
GCTGGATCAACGGTTACATCAATTAAATGCGCTTTTTCGTCTTCCTCGCT
CTTGTCTCTTACGCTGCGGCGCAGGGTTATGAAGACCGCATTGTCGGCGG
GTCGGAGGCGACCCCAGGTGCCTTCCCGTGGCAGGTGTCTCTGCAACAGA
ACGGCTATCACTTTTGTGGCGGCACGCTCCTCAACAGCCAGTGGGTTCTC
AGCGCTGCTCACTGCCAAATGAGTGCTAGTAGCATGACTGTAGTTGCCGG
AGATCACGACTTGAGCAGAAACGAGGGCACCGAACAGAGTCGTCGGGTAC
AACAGGTCATACCACACCCAAGCTACAACGACAACACCCTTAACAACGAC
ATCATGCTCATCAAGCTCAGCTCTCCCGTCACTCTGAACTCCCGGGTCAG
CCCGGCGTCCCTGCCATCCTCCATGGTTGCCGACGGGACCATGGTCACTG
TCACCGGCTGGGGAAACACCCGTGCCAGTGGATCTAACTACCCGGACAGG
CTACAAAAGGTCGATGTGCCCGTCGTCTCCCGATCCACCTGCAATGCTGC
TAACGCTTACGGCGGAGAGGTCACGGCCAAAATGTTCTGTGCCGGCTACA
TGGATGGCGGCAAGGACTCCTGCCAGGGAGACAGCGGCGGTCCCGTGGTG
AGATCCGGTACGGTCTACGGCGTAGTGAGCTGGGGCTACGGTTGTGCCCA
GCGTAACTACCCGGGTGTCTACGCCAAGGTGAACAGATTCACCAGCTGGA
TCAACGGTTACATCAATTAAATGCGCTTTTTCGTCTTCCTCGCTCTTGTC
TCTTACGCTGCGGCGCAGGGTTATGAAGACCGCATTGTCGGCGGGTCGGA
GGCGACCCCAGGTGCCTTCCCGTGGCAGGTGTCTCTGCAACAGAACGGCT
ATCACTTTTGTGGCGGCACGCTCCTCAACAGCCAGTGGGTTCTCAGCGCT
GCTCACTGCCAAATGAGTGCTAGTAGCATGACTGTAGTTGCCGGAGATCA
CGACTTGAGCAGAAACGAGGGCACCGAACAGAGTCGTCGGGTACAACAGG
TCATACCACACCCAAGCTACAACGACAACACCCTTAACAACGACATCATG
CTCATCAAGCTCAGCTCTCCCGTCACTCTGAACTCCCGGGTCAGCCCGGC
GTCCCTGCCATCCTCCATGGTTGCCGACGGGACCATGGTCACTGTCACCG
GCTGGGGAAACACCCGTGCCAGTGGATCTAACTACCCGGACAGGCTACAA
AAGGTCGATGTGCCCGTCGTCTCCCGATCCACCTGCAATGCTGCTAACGC
TTACGGCGGAGAGGTCACGGCCAAAATGTTCTGTGCCGGCTACATGGATG
GCGGCAAGGACTCCTGCCAGGGAGACAGCGGCGGTCCCGTGGTGAGATCC
GGTACGGTCTACGGCGTAGTGAGCTGGGGCTACGGTTGTGCCCAGCGTAA
CTACCCGGGTGTCTACGCCAAGGTGAACAGATTCACCAGCTGGATCAACG
GTTACATCAATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000201 | genome | Sc0000201:112225..115225 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95900_evm0 |
| Biotype | protein_coding |
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