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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95892_evm0 >transcript:BL95892_evm0-protein ID=transcript:BL95892_evm0-protein|Name=transcript:BL95892_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=285bp
MAAPMRFGAAAVMQSAVTRGLFRSRLFSASTAATPLSDLAKQESSEKVAP
SILQKDESTMERILLEPLKNPDFFGVNKLFTQRDLFNANVHVGHKEGAWD
RNMYPYIFGARLGVHIIDLDQTVELLNRALNFTAHMAYRKAIVLFISRHR
QFTQLVEDTAKDCGQYAHTRYWQGGMFTNATLQYGEGVRLPELVIFLHTL
NNVFEPHVAIRDAAKMNIPTVGIVDTNCNPNLITYPVPGNDDSSEAVELY
CRLFKEAILKGKAKREEIEKQIATEREEKTRKEGA Run BLAST on NCBI mRNA from alignment at Sc0000198:154600..156534- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95892_evm0 ID=transcript:BL95892_evm0|Name=transcript:BL95892_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=1935bp|location=Sequence derived from alignment at Sc0000198:154600..156534- (Branchiostoma lanceolatum)
ATGGCGGCGCCCATGCGGTTTGGTGCAGGTTGGTAGAAATATTCATCTCA
GTGTAAAGCGACTGTATCTACTGCGCTGAAGCACAGATAACGTGCGTTAC
CAGACAGAGCTAGGTTATGGTTGGGGCATAAATTTCCTGATGTTTGGGTT
CTGTAGTGCTTACAATCGTTGCTGAGCTCGTCGCCCTTGTCTCTGGAACG
CGCGTGGCTTAGGAAAAAATTATATGAATAATGAAAGCATGTAAATTATA
AAGTCTTTTGTCTCAATACAAGAAAAATCGTTGCTAGTTTTGTGGTTTTG
TTTCGTCAGCTAGTGTAGGATTTTATTTCTCATTGATTGTGTGTTCCAAA
AAAAGAGATGAATTATCTTTCACTCTCCATCATATTTGCCCCCCTCCCCC
ATTATAAAATTTTCTGTCCAAGGCCAAAGGTGAAAATTGCAGATTGATTA
CTTAAGATGTACAATCAGTAGATCGATAATCATACTTCAAAAGTGTATTG
TATGTTTGCCTCGTATATTTATATAAACTGCCATTGTGTGCATTGATTTC
AGCTGCTGTGATGCAGTCTGCTGTCACTAGGGGACTCTTCAGGTCACGGT
TGTTCTCAGCCTCAACAGCGGCCACACCGTTGAGCGACCTCGCCAAACAA
GAATCATCTGAAAAGGTGGCCCCATCAATCCTCCAGAAGGATGGTATGTT
TTTCATGTTACATTTTGTGAAATGTGAGTACATTTCAGTCTCAACAAGTT
TCAATGCTCTTATAAGCCCATTTGCGGTTCCGATTACGCATGTGCAGTGT
CAAAGGTGAAGACCCCTGACTTGTAAACAGTTCTCGTCTCGATTAGATTT
GCATAACAATACCCAGACGGGTTTTGTTTACGTTTCAGGGGCCTTTACCT
TTGACACTGCACATGCGTAAACGGAATCGTGAATCAGGGCTTAAAGAGAC
ATCCCACTGCCACGCACCTCCAACCATGTTACAGCCTCATTTCCCCATGG
GTACCTACTGGCTACTAGTACTAGTATACTTCAAGGTGAATATTCAAGGT
GAAATGTATTTTAAATGATGCTCAAATATTATGATCAATCCGTTTTTCAG
CAATAATGGTTATCCCTCTCACATGATAAACTGCAAACTGTGAAGCCTTA
CAGGATAAGATTTTAAGAATCCAAATCTCTCATCCATAGTTGTCACCCTT
CCTCTCTTGACTAACGTTACCTGTTGTTTCTTCCTTATCCTAACAGAATC
AACAATGGAGAGGATTCTGTTGGAACCGTTGAAGAATCCAGACTTCTTTG
GGGTCAACAAACTCTTCACCCAGAGGGACCTGTTCAACGCTAACGTCCAC
GTCGGCCACAAGGAGGGAGCGTGGGACAGAAACATGTATCCTTACATCTT
CGGCGCTCGTCTTGGAGTTCACATCATCGACCTGGACCAAACTGTCGAGC
TCCTAAACCGTGCGCTGAACTTTACGGCGCACATGGCGTACCGCAAGGCG
ATTGTCCTGTTTATCAGTCGCCACCGACAGTTTACTCAGCTCGTTGAAGA
CACCGCCAAGGACTGTGGACAGTATGCTCACACGCGTTACTGGCAGGGGG
GAATGTTCACTAACGCTACGTTACAGTACGGGGAGGGGGTGAGGCTGCCC
GAGCTTGTCATCTTCCTCCACACGTTGAATAACGTGTTTGAGCCACACGT
AGCAATACGGGACGCGGCAAAGATGAACATCCCTACCGTGGGGATTGTGG
ACACCAACTGTAATCCGAACCTCATCACGTACCCCGTACCAGGGAACGAC
GACAGTTCGGAAGCCGTGGAACTCTACTGTAGGCTCTTCAAGGAAGCCAT
CTTGAAAGGGAAGGCAAAGAGAGAGGAGATAGAGAAGCAGATAGCAACAG
AAAGAGAAGAAAAGACCAGAAAAGAAGGAGCATGA Coding sequence (CDS) from alignment at Sc0000198:154600..156534- >transcript:BL95892_evm0 ID=transcript:BL95892_evm0|Name=transcript:BL95892_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=2574bp|location=Sequence derived from alignment at Sc0000198:154600..156534- (Branchiostoma lanceolatum)
ATGGCGGCGCCCATGCGGTTTGGTGCAGCTGCTGTGATGCAGTCTGCTGT
CACTAGGGGACTCTTCAGGTCACGGTTGTTCTCAGCCTCAACAGCGGCCA
CACCGTTGAGCGACCTCGCCAAACAAGAATCATCTGAAAAGGTGGCCCCA
TCAATCCTCCAGAAGGATGAATCAACAATGGAGAGGATTCTGTTGGAACC
GTTGAAGAATCCAGACTTCTTTGGGGTCAACAAACTCTTCACCCAGAGGG
ACCTGTTCAACGCTAACGTCCACGTCGGCCACAAGGAGGGAGCGTGGGAC
AGAAACATGTATCCTTACATCTTCGGCGCTCGTCTTGGAGTTCACATCAT
CGACCTGGACCAAACTGTCGAGCTCCTAAACCGTGCGCTGAACTTTACGG
CGCACATGGCGTACCGCAAGGCGATTGTCCTGTTTATCAGTCGCCACCGA
CAGTTTACTCAGCTCGTTGAAGACACCGCCAAGGACTGTGGACAGTATGC
TCACACGCGTTACTGGCAGGGGGGAATGTTCACTAACGCTACGTTACAGT
ACGGGGAGGGGGTGAGGCTGCCCGAGCTTGTCATCTTCCTCCACACGTTG
AATAACGTGTTTGAGCCACACGTAGCAATACGGGACGCGGCAAAGATGAA
CATCCCTACCGTGGGGATTGTGGACACCAACTGTAATCCGAACCTCATCA
CGTACCCCGTACCAGGGAACGACGACAGTTCGGAAGCCGTGGAACTCTAC
TGTAGGCTCTTCAAGGAAGCCATCTTGAAAGGGAAGGCAAAGAGAGAGGA
GATAGAGAAGCAGATAGCAACAGAAAGAGAAGAAAAGACCAGAAAAGAAG
GAGCATGAATGGCGGCGCCCATGCGGTTTGGTGCAGCTGCTGTGATGCAG
TCTGCTGTCACTAGGGGACTCTTCAGGTCACGGTTGTTCTCAGCCTCAAC
AGCGGCCACACCGTTGAGCGACCTCGCCAAACAAGAATCATCTGAAAAGG
TGGCCCCATCAATCCTCCAGAAGGATGAATCAACAATGGAGAGGATTCTG
TTGGAACCGTTGAAGAATCCAGACTTCTTTGGGGTCAACAAACTCTTCAC
CCAGAGGGACCTGTTCAACGCTAACGTCCACGTCGGCCACAAGGAGGGAG
CGTGGGACAGAAACATGTATCCTTACATCTTCGGCGCTCGTCTTGGAGTT
CACATCATCGACCTGGACCAAACTGTCGAGCTCCTAAACCGTGCGCTGAA
CTTTACGGCGCACATGGCGTACCGCAAGGCGATTGTCCTGTTTATCAGTC
GCCACCGACAGTTTACTCAGCTCGTTGAAGACACCGCCAAGGACTGTGGA
CAGTATGCTCACACGCGTTACTGGCAGGGGGGAATGTTCACTAACGCTAC
GTTACAGTACGGGGAGGGGGTGAGGCTGCCCGAGCTTGTCATCTTCCTCC
ACACGTTGAATAACGTGTTTGAGCCACACGTAGCAATACGGGACGCGGCA
AAGATGAACATCCCTACCGTGGGGATTGTGGACACCAACTGTAATCCGAA
CCTCATCACGTACCCCGTACCAGGGAACGACGACAGTTCGGAAGCCGTGG
AACTCTACTGTAGGCTCTTCAAGGAAGCCATCTTGAAAGGGAAGGCAAAG
AGAGAGGAGATAGAGAAGCAGATAGCAACAGAAAGAGAAGAAAAGACCAG
AAAAGAAGGAGCATGAATGGCGGCGCCCATGCGGTTTGGTGCAGCTGCTG
TGATGCAGTCTGCTGTCACTAGGGGACTCTTCAGGTCACGGTTGTTCTCA
GCCTCAACAGCGGCCACACCGTTGAGCGACCTCGCCAAACAAGAATCATC
TGAAAAGGTGGCCCCATCAATCCTCCAGAAGGATGAATCAACAATGGAGA
GGATTCTGTTGGAACCGTTGAAGAATCCAGACTTCTTTGGGGTCAACAAA
CTCTTCACCCAGAGGGACCTGTTCAACGCTAACGTCCACGTCGGCCACAA
GGAGGGAGCGTGGGACAGAAACATGTATCCTTACATCTTCGGCGCTCGTC
TTGGAGTTCACATCATCGACCTGGACCAAACTGTCGAGCTCCTAAACCGT
GCGCTGAACTTTACGGCGCACATGGCGTACCGCAAGGCGATTGTCCTGTT
TATCAGTCGCCACCGACAGTTTACTCAGCTCGTTGAAGACACCGCCAAGG
ACTGTGGACAGTATGCTCACACGCGTTACTGGCAGGGGGGAATGTTCACT
AACGCTACGTTACAGTACGGGGAGGGGGTGAGGCTGCCCGAGCTTGTCAT
CTTCCTCCACACGTTGAATAACGTGTTTGAGCCACACGTAGCAATACGGG
ACGCGGCAAAGATGAACATCCCTACCGTGGGGATTGTGGACACCAACTGT
AATCCGAACCTCATCACGTACCCCGTACCAGGGAACGACGACAGTTCGGA
AGCCGTGGAACTCTACTGTAGGCTCTTCAAGGAAGCCATCTTGAAAGGGA
AGGCAAAGAGAGAGGAGATAGAGAAGCAGATAGCAACAGAAAGAGAAGAA
AAGACCAGAAAAGAAGGAGCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000198 | genome | Sc0000198:154600..156534 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95892_evm0 |
| Biotype | protein_coding |
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