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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95868_evm1 >transcript:BL95868_evm1-protein ID=transcript:BL95868_evm1-protein|Name=transcript:BL95868_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=331bp
MKSAATLSVPLLVISFFAGMWTTGVYYNYYREAASEGIPEPQRKWRHSEA
QIRRQQGLDIWARRNHSYHDVTKVLYNRLPKCGSNTMKVLIRELKNRNRF
QFFEDKEYGMKALPTELLRQFVQMVDKLPRPSIYEKHIYYVDFQTFGKQQ
PTYINLVRDPLERRISGYYYMRFGRIEGNQKEKRTEEERAQTFDDCVLNN
MWECDEFGPKTFTMTQFFCGQESICMEPSQMAVERAKENIRRHYAVVGVL
EEFSSFLKVLEVVMPQFFRGAHDTWRETESKQMEHQKTAIKITPSEKSRE
IMRQRLHVDYQVYDFIKERFHMQKTQLGIKD Run BLAST on NCBI mRNA from alignment at Sc0000181:214070..216532+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95868_evm1 ID=transcript:BL95868_evm1|Name=transcript:BL95868_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2463bp|location=Sequence derived from alignment at Sc0000181:214070..216532+ (Branchiostoma lanceolatum)
ATGAAGTCTGCAGCAACACTGAGTGTTCCGCTGTTAGTGATCAGCTTCTT
CGCTGGAATGTGGACCACAGGAGTGTACTACAACTATTACAGAGGTACGG
ATCATGATTCTTGGGGCCCTTGCACAAAATAGCTACTCCATAACAGATCT
AGAGGTAGTCGTCGGCAAAAATGGTGGTGGTAGTGGTGGTGGTAGTAGTG
TGTGTGTGTGTGTGCTTGTGTGCTTGTGTGTGTGGTGATTTAGATCAAGA
GTGCCATTCTGATTTCTCGAAGTACTAGATACCCCGCTTATTGCTTAGCA
TGGATGTTGGGTGCCATCCGATTACTACCGGGGCTCCTACACTCGCTTAC
CTGGAAAAATGGGGAAGCGAGTGTAGGAGCCCCGGCAGTAAACGGTTGGC
ACCCAGGCTACCTTATAACGGTGTCGTTTTTAAAATATATCATATATAGT
AGCACAAACTGTTCACCCCCTTTTCTAACAGAAGCTGCGAGCGAAGGAAT
CCCGGAGCCACAGAGAAAATGGAGACACAGTGAGGCCCAGATAAGACGTC
AACAGGGACTGGACATCTGGGCGCGTCGTAACCATAGCTACCATGACGTC
ACAAAAGTCCTATACAACAGGTTACCTAAGTGTGGGAGTAACACCATGAA
AGTGCTTATCAGGGAACTAAAGAACAGAAATCGGTTTCAATTCTTTGAAG
ACAAGGAGTACGGAATGAAGGCACTTCCTACAGAGCTGTTGGTGAGTTAA
CTGGCATTTTTGTTTACATGTAGGGTGGGATGTGTGGTTTTGTTAAAGTC
AGGTAGGGCATATCCAGTCTAATCCTATAGTATTAGAAACCAGCCATTGA
TGTAATGATCAACTAATCAGTTTCCCCCTATTCTATATATTGACTGACAT
TTGGCTGAAATTTGCAGACTTTCCATGACAGGGATTGATTATTACTAAGG
AATCTTTGCTTGCCGTTTGTTCCACATCATGATTATTGTGAATTATGTTT
GTGACTCCAGCGTCAGTTTGTACAAATGGTCGACAAACTCCCGAGACCAT
CGATCTACGAAAAGCACATCTACTACGTGGACTTTCAAACGTGAGTATCA
AGCATTCTCGTGCGCAGCGCCACCTTGCGGTCTACTAAGTACACTGCAGG
GTGGCGCTACGCAGGAGAGAATGGTATCAAGAAGGTCGCGTTTTCATTAT
CATAACTTTGTAAAGTGCAAGAAGCATAACCTTATTGGCATGTTTTTGAA
AGCTAAACGAAGTCTCTTTCCCCTGGACCGTAGCCCTTTGCAAGTTGTCG
GCTGAGCCTCTCTTTTTGATATGATTAAATCCCTTAATTATGTGTTTCTT
TTCTTTAAGGTTCGGTAAGCAGCAGCCAACATACATTAACTTGGTCCGGG
ACCCCTTAGAACGGCGGATCTCTGGCTACTACTATATGCGGTTTGGACGA
ATCGAAGGCAACCAAAAGGAGAAACGAACAGAGGAGGAGAGAGCACAGGT
TTCTAAAATGATAAAGTCTAAAATGTCATTGACATCGTCATCGAGATATC
AATCATTGATAAAGACGGTTAACTACCCTTTCCGAACATTCTCCAGAATC
GCTTATCGTGCTGTTGTTAATTGATTCTCTTTTTTTCTTCTTTTCTAGAC
GTTTGATGACTGCGTACTTAACAACATGTGGGAATGCGATGAGTTTGGAC
CGAAAACGTTTACTATGACACAATTCTTTTGTGGGCAAGAATCGATATGC
ATGTAGGTATGAGTGTGCACATATGCATGTGTTTTCCTATGTTTGAGATA
TTCCCTATGCAACGCTATATACTTGATGATGTGTACGTAGATATACTTTT
GTATTGGGTTGTCATGAGCGATAGTTAAACGATGTGATCGCCATAGTTTT
ATAGCTGATAATTTCCTAGATAAGGAAAACACTTTTTGTTGTAGGGAGCC
TTCCCAGATGGCAGTGGAAAGAGCCAAAGAGAACATCAGGAGACATTACG
CCGTGGTCGGGGTACTGGAGGAGTTCAGCAGCTTCCTGAAGGTCCTGGAG
GTGGTCATGCCGCAGTTCTTCCGTGGAGCCCATGACACATGGCGGGAAAC
TGGTAACGTTAGGTAGTGACTAGTGAGAGTAGTTGTGCCAAAGAGATACA
AAAAGAAGTTATTATAGTCGGTGACTGGCGTCTATGCCAAATTCCTGGCG
TCTATGCCAAACGTATTCTGTTGTTGTGTCAGTATGTACCTGTATGTTTT
GGGCATAACTTACTTTCAACGTGACAGAATACTTTGTGTTTGAATCTTGC
AGAGTCAAAGCAGATGGAACATCAGAAGACGGCAATAAAGATAACCCCTT
CGGAGAAGAGCCGAGAAATCATGAGACAAAGATTGCACGTGGACTACCAA
GTGTACGACTTTATCAAGGAGAGATTCCACATGCAGAAAACACAGCTAGG
AATAAAGGACTGA Coding sequence (CDS) from alignment at Sc0000181:214070..216532+ >transcript:BL95868_evm1 ID=transcript:BL95868_evm1|Name=transcript:BL95868_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=6972bp|location=Sequence derived from alignment at Sc0000181:214070..216532+ (Branchiostoma lanceolatum)
ATGAAGTCTGCAGCAACACTGAGTGTTCCGCTGTTAGTGATCAGCTTCTT
CGCTGGAATGTGGACCACAGGAGTGTACTACAACTATTACAGAGAAGCTG
CGAGCGAAGGAATCCCGGAGCCACAGAGAAAATGGAGACACAGTGAGGCC
CAGATAAGACGTCAACAGGGACTGGACATCTGGGCGCGTCGTAACCATAG
CTACCATGACGTCACAAAAGTCCTATACAACAGGTTACCTAAGTGTGGGA
GTAACACCATGAAAGTGCTTATCAGGGAACTAAAGAACAGAAATCGGTTT
CAATTCTTTGAAGACAAGGAGTACGGAATGAAGGCACTTCCTACAGAGCT
GTTGCGTCAGTTTGTACAAATGGTCGACAAACTCCCGAGACCATCGATCT
ACGAAAAGCACATCTACTACGTGGACTTTCAAACGTTCGGTAAGCAGCAG
CCAACATACATTAACTTGGTCCGGGACCCCTTAGAACGGCGGATCTCTGG
CTACTACTATATGCGGTTTGGACGAATCGAAGGCAACCAAAAGGAGAAAC
GAACAGAGGAGGAGAGAGCACAGACGTTTGATGACTGCGTACTTAACAAC
ATGTGGGAATGCGATGAGTTTGGACCGAAAACGTTTACTATGACACAATT
CTTTTGTGGGCAAGAATCGATATGCATGGAGCCTTCCCAGATGGCAGTGG
AAAGAGCCAAAGAGAACATCAGGAGACATTACGCCGTGGTCGGGGTACTG
GAGGAGTTCAGCAGCTTCCTGAAGGTCCTGGAGGTGGTCATGCCGCAGTT
CTTCCGTGGAGCCCATGACACATGGCGGGAAACTGAGTCAAAGCAGATGG
AACATCAGAAGACGGCAATAAAGATAACCCCTTCGGAGAAGAGCCGAGAA
ATCATGAGACAAAGATTGCACGTGGACTACCAAGTGTACGACTTTATCAA
GGAGAGATTCCACATGCAGAAAACACAGCTAGGAATAAAGGACTGAATGA
AGTCTGCAGCAACACTGAGTGTTCCGCTGTTAGTGATCAGCTTCTTCGCT
GGAATGTGGACCACAGGAGTGTACTACAACTATTACAGAGAAGCTGCGAG
CGAAGGAATCCCGGAGCCACAGAGAAAATGGAGACACAGTGAGGCCCAGA
TAAGACGTCAACAGGGACTGGACATCTGGGCGCGTCGTAACCATAGCTAC
CATGACGTCACAAAAGTCCTATACAACAGGTTACCTAAGTGTGGGAGTAA
CACCATGAAAGTGCTTATCAGGGAACTAAAGAACAGAAATCGGTTTCAAT
TCTTTGAAGACAAGGAGTACGGAATGAAGGCACTTCCTACAGAGCTGTTG
CGTCAGTTTGTACAAATGGTCGACAAACTCCCGAGACCATCGATCTACGA
AAAGCACATCTACTACGTGGACTTTCAAACGTTCGGTAAGCAGCAGCCAA
CATACATTAACTTGGTCCGGGACCCCTTAGAACGGCGGATCTCTGGCTAC
TACTATATGCGGTTTGGACGAATCGAAGGCAACCAAAAGGAGAAACGAAC
AGAGGAGGAGAGAGCACAGACGTTTGATGACTGCGTACTTAACAACATGT
GGGAATGCGATGAGTTTGGACCGAAAACGTTTACTATGACACAATTCTTT
TGTGGGCAAGAATCGATATGCATGGAGCCTTCCCAGATGGCAGTGGAAAG
AGCCAAAGAGAACATCAGGAGACATTACGCCGTGGTCGGGGTACTGGAGG
AGTTCAGCAGCTTCCTGAAGGTCCTGGAGGTGGTCATGCCGCAGTTCTTC
CGTGGAGCCCATGACACATGGCGGGAAACTGAGTCAAAGCAGATGGAACA
TCAGAAGACGGCAATAAAGATAACCCCTTCGGAGAAGAGCCGAGAAATCA
TGAGACAAAGATTGCACGTGGACTACCAAGTGTACGACTTTATCAAGGAG
AGATTCCACATGCAGAAAACACAGCTAGGAATAAAGGACTGAATGAAGTC
TGCAGCAACACTGAGTGTTCCGCTGTTAGTGATCAGCTTCTTCGCTGGAA
TGTGGACCACAGGAGTGTACTACAACTATTACAGAGAAGCTGCGAGCGAA
GGAATCCCGGAGCCACAGAGAAAATGGAGACACAGTGAGGCCCAGATAAG
ACGTCAACAGGGACTGGACATCTGGGCGCGTCGTAACCATAGCTACCATG
ACGTCACAAAAGTCCTATACAACAGGTTACCTAAGTGTGGGAGTAACACC
ATGAAAGTGCTTATCAGGGAACTAAAGAACAGAAATCGGTTTCAATTCTT
TGAAGACAAGGAGTACGGAATGAAGGCACTTCCTACAGAGCTGTTGCGTC
AGTTTGTACAAATGGTCGACAAACTCCCGAGACCATCGATCTACGAAAAG
CACATCTACTACGTGGACTTTCAAACGTTCGGTAAGCAGCAGCCAACATA
CATTAACTTGGTCCGGGACCCCTTAGAACGGCGGATCTCTGGCTACTACT
ATATGCGGTTTGGACGAATCGAAGGCAACCAAAAGGAGAAACGAACAGAG
GAGGAGAGAGCACAGACGTTTGATGACTGCGTACTTAACAACATGTGGGA
ATGCGATGAGTTTGGACCGAAAACGTTTACTATGACACAATTCTTTTGTG
GGCAAGAATCGATATGCATGGAGCCTTCCCAGATGGCAGTGGAAAGAGCC
AAAGAGAACATCAGGAGACATTACGCCGTGGTCGGGGTACTGGAGGAGTT
CAGCAGCTTCCTGAAGGTCCTGGAGGTGGTCATGCCGCAGTTCTTCCGTG
GAGCCCATGACACATGGCGGGAAACTGAGTCAAAGCAGATGGAACATCAG
AAGACGGCAATAAAGATAACCCCTTCGGAGAAGAGCCGAGAAATCATGAG
ACAAAGATTGCACGTGGACTACCAAGTGTACGACTTTATCAAGGAGAGAT
TCCACATGCAGAAAACACAGCTAGGAATAAAGGACTGAATGAAGTCTGCA
GCAACACTGAGTGTTCCGCTGTTAGTGATCAGCTTCTTCGCTGGAATGTG
GACCACAGGAGTGTACTACAACTATTACAGAGAAGCTGCGAGCGAAGGAA
TCCCGGAGCCACAGAGAAAATGGAGACACAGTGAGGCCCAGATAAGACGT
CAACAGGGACTGGACATCTGGGCGCGTCGTAACCATAGCTACCATGACGT
CACAAAAGTCCTATACAACAGGTTACCTAAGTGTGGGAGTAACACCATGA
AAGTGCTTATCAGGGAACTAAAGAACAGAAATCGGTTTCAATTCTTTGAA
GACAAGGAGTACGGAATGAAGGCACTTCCTACAGAGCTGTTGCGTCAGTT
TGTACAAATGGTCGACAAACTCCCGAGACCATCGATCTACGAAAAGCACA
TCTACTACGTGGACTTTCAAACGTTCGGTAAGCAGCAGCCAACATACATT
AACTTGGTCCGGGACCCCTTAGAACGGCGGATCTCTGGCTACTACTATAT
GCGGTTTGGACGAATCGAAGGCAACCAAAAGGAGAAACGAACAGAGGAGG
AGAGAGCACAGACGTTTGATGACTGCGTACTTAACAACATGTGGGAATGC
GATGAGTTTGGACCGAAAACGTTTACTATGACACAATTCTTTTGTGGGCA
AGAATCGATATGCATGGAGCCTTCCCAGATGGCAGTGGAAAGAGCCAAAG
AGAACATCAGGAGACATTACGCCGTGGTCGGGGTACTGGAGGAGTTCAGC
AGCTTCCTGAAGGTCCTGGAGGTGGTCATGCCGCAGTTCTTCCGTGGAGC
CCATGACACATGGCGGGAAACTGAGTCAAAGCAGATGGAACATCAGAAGA
CGGCAATAAAGATAACCCCTTCGGAGAAGAGCCGAGAAATCATGAGACAA
AGATTGCACGTGGACTACCAAGTGTACGACTTTATCAAGGAGAGATTCCA
CATGCAGAAAACACAGCTAGGAATAAAGGACTGAATGAAGTCTGCAGCAA
CACTGAGTGTTCCGCTGTTAGTGATCAGCTTCTTCGCTGGAATGTGGACC
ACAGGAGTGTACTACAACTATTACAGAGAAGCTGCGAGCGAAGGAATCCC
GGAGCCACAGAGAAAATGGAGACACAGTGAGGCCCAGATAAGACGTCAAC
AGGGACTGGACATCTGGGCGCGTCGTAACCATAGCTACCATGACGTCACA
AAAGTCCTATACAACAGGTTACCTAAGTGTGGGAGTAACACCATGAAAGT
GCTTATCAGGGAACTAAAGAACAGAAATCGGTTTCAATTCTTTGAAGACA
AGGAGTACGGAATGAAGGCACTTCCTACAGAGCTGTTGCGTCAGTTTGTA
CAAATGGTCGACAAACTCCCGAGACCATCGATCTACGAAAAGCACATCTA
CTACGTGGACTTTCAAACGTTCGGTAAGCAGCAGCCAACATACATTAACT
TGGTCCGGGACCCCTTAGAACGGCGGATCTCTGGCTACTACTATATGCGG
TTTGGACGAATCGAAGGCAACCAAAAGGAGAAACGAACAGAGGAGGAGAG
AGCACAGACGTTTGATGACTGCGTACTTAACAACATGTGGGAATGCGATG
AGTTTGGACCGAAAACGTTTACTATGACACAATTCTTTTGTGGGCAAGAA
TCGATATGCATGGAGCCTTCCCAGATGGCAGTGGAAAGAGCCAAAGAGAA
CATCAGGAGACATTACGCCGTGGTCGGGGTACTGGAGGAGTTCAGCAGCT
TCCTGAAGGTCCTGGAGGTGGTCATGCCGCAGTTCTTCCGTGGAGCCCAT
GACACATGGCGGGAAACTGAGTCAAAGCAGATGGAACATCAGAAGACGGC
AATAAAGATAACCCCTTCGGAGAAGAGCCGAGAAATCATGAGACAAAGAT
TGCACGTGGACTACCAAGTGTACGACTTTATCAAGGAGAGATTCCACATG
CAGAAAACACAGCTAGGAATAAAGGACTGAATGAAGTCTGCAGCAACACT
GAGTGTTCCGCTGTTAGTGATCAGCTTCTTCGCTGGAATGTGGACCACAG
GAGTGTACTACAACTATTACAGAGAAGCTGCGAGCGAAGGAATCCCGGAG
CCACAGAGAAAATGGAGACACAGTGAGGCCCAGATAAGACGTCAACAGGG
ACTGGACATCTGGGCGCGTCGTAACCATAGCTACCATGACGTCACAAAAG
TCCTATACAACAGGTTACCTAAGTGTGGGAGTAACACCATGAAAGTGCTT
ATCAGGGAACTAAAGAACAGAAATCGGTTTCAATTCTTTGAAGACAAGGA
GTACGGAATGAAGGCACTTCCTACAGAGCTGTTGCGTCAGTTTGTACAAA
TGGTCGACAAACTCCCGAGACCATCGATCTACGAAAAGCACATCTACTAC
GTGGACTTTCAAACGTTCGGTAAGCAGCAGCCAACATACATTAACTTGGT
CCGGGACCCCTTAGAACGGCGGATCTCTGGCTACTACTATATGCGGTTTG
GACGAATCGAAGGCAACCAAAAGGAGAAACGAACAGAGGAGGAGAGAGCA
CAGACGTTTGATGACTGCGTACTTAACAACATGTGGGAATGCGATGAGTT
TGGACCGAAAACGTTTACTATGACACAATTCTTTTGTGGGCAAGAATCGA
TATGCATGGAGCCTTCCCAGATGGCAGTGGAAAGAGCCAAAGAGAACATC
AGGAGACATTACGCCGTGGTCGGGGTACTGGAGGAGTTCAGCAGCTTCCT
GAAGGTCCTGGAGGTGGTCATGCCGCAGTTCTTCCGTGGAGCCCATGACA
CATGGCGGGAAACTGAGTCAAAGCAGATGGAACATCAGAAGACGGCAATA
AAGATAACCCCTTCGGAGAAGAGCCGAGAAATCATGAGACAAAGATTGCA
CGTGGACTACCAAGTGTACGACTTTATCAAGGAGAGATTCCACATGCAGA
AAACACAGCTAGGAATAAAGGACTGAATGAAGTCTGCAGCAACACTGAGT
GTTCCGCTGTTAGTGATCAGCTTCTTCGCTGGAATGTGGACCACAGGAGT
GTACTACAACTATTACAGAGAAGCTGCGAGCGAAGGAATCCCGGAGCCAC
AGAGAAAATGGAGACACAGTGAGGCCCAGATAAGACGTCAACAGGGACTG
GACATCTGGGCGCGTCGTAACCATAGCTACCATGACGTCACAAAAGTCCT
ATACAACAGGTTACCTAAGTGTGGGAGTAACACCATGAAAGTGCTTATCA
GGGAACTAAAGAACAGAAATCGGTTTCAATTCTTTGAAGACAAGGAGTAC
GGAATGAAGGCACTTCCTACAGAGCTGTTGCGTCAGTTTGTACAAATGGT
CGACAAACTCCCGAGACCATCGATCTACGAAAAGCACATCTACTACGTGG
ACTTTCAAACGTTCGGTAAGCAGCAGCCAACATACATTAACTTGGTCCGG
GACCCCTTAGAACGGCGGATCTCTGGCTACTACTATATGCGGTTTGGACG
AATCGAAGGCAACCAAAAGGAGAAACGAACAGAGGAGGAGAGAGCACAGA
CGTTTGATGACTGCGTACTTAACAACATGTGGGAATGCGATGAGTTTGGA
CCGAAAACGTTTACTATGACACAATTCTTTTGTGGGCAAGAATCGATATG
CATGGAGCCTTCCCAGATGGCAGTGGAAAGAGCCAAAGAGAACATCAGGA
GACATTACGCCGTGGTCGGGGTACTGGAGGAGTTCAGCAGCTTCCTGAAG
GTCCTGGAGGTGGTCATGCCGCAGTTCTTCCGTGGAGCCCATGACACATG
GCGGGAAACTGAGTCAAAGCAGATGGAACATCAGAAGACGGCAATAAAGA
TAACCCCTTCGGAGAAGAGCCGAGAAATCATGAGACAAAGATTGCACGTG
GACTACCAAGTGTACGACTTTATCAAGGAGAGATTCCACATGCAGAAAAC
ACAGCTAGGAATAAAGGACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000181 | genome | Sc0000181:214070..216532 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95868_evm1 |
| Biotype | protein_coding |
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