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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95866_evm2 >transcript:BL95866_evm2-protein ID=transcript:BL95866_evm2-protein|Name=transcript:BL95866_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=330bp
MASLAIIRRLGALIVFFAVISVWTTLQLYRDVKIGEENPGAPIQTWVGHV
QDQKPLTTQSASNHSYPKVFYNRLPKCGSTSVKMLIRELKKRNGFKFFED
KDYEIQVLRGRNLRQFAQMVDRLPTPSIYDKHIFYVDFHQFGLQQPKYIN
LVRDPLEQRISDYYYMRFGRHGDNQTAQQRQRRTDEERAQTFDECVFNNL
WECNASGAKGFLMTQFFCGQDSICMEPSQLAVERAKENIRRHYAVVGVLE
EFSSFLKVLEVVMPQFFRGAQETWREIESQQMEHQKTAKKIPPSGKARYI
MRQRLHLDYQVYDFIKERFHMQKTQLGIKD Run BLAST on NCBI mRNA from alignment at Sc0000181:230784..234019+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95866_evm2 ID=transcript:BL95866_evm2|Name=transcript:BL95866_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=3236bp|location=Sequence derived from alignment at Sc0000181:230784..234019+ (Branchiostoma lanceolatum)
ATGGCATCGCTGGCGATCATCAGGCGTTTAGGAGCCCTTATAGTGTTCTT
CGCAGTGATCTCAGTTTGGACAACACTACAGCTTTACCGTGACGTTAAGA
TAGGTAAGCATCTATTCCCTGGCTATAGTACAATTCACTAAAGTAGAGAA
ATTTGTTGTTTTGGAGACATATTTAACGTTACATGAAGGAAAATAGTCCA
CTAATTATCAGACACAGTGTCGGACCGGAACAACATGTTCCGCACAAAAC
ATGCTCCAGAAATGGCGAATGTAGGTCGATGACGAAAAGAAAACCACGTT
TTATAAACCTTGACTTGCTCTGGCACATGATTTGTTACGCTCCCCTGACA
TCATGAGATTTTCGGCAGTCGTTGAAGTAATGAAGGCTATTTCTAAATGT
ACCAGACCGAAAGCAAACACCCTTTCTTTTGAAACCAGTCTCCCTAAGTT
GTTTTCCTATCCACGCCGTTGGCTAGGAATTAACCTATTGGAATCTTCTT
ATATCTGTCAGTCCTTACCAGTACCTTATTACCTACCAGTAGTCTGAATT
TCCTCTGTACGTTTTTTGCTACCCGTTTCTCCCATGTCTTCAAAAGAGAT
CAGTTTACGACTTGAAAAATCTGATTTCGTTTGAATGTGCTTTGTTGGTG
TAGAGTCATAACGTTACATAATTAAGTGACTTAAATGACTGTGTAACCTT
ACTCCAGGTGAAGAGAACCCCGGAGCGCCAATACAAACGTGGGTTGGACA
TGTCCAGGACCAGAAGCCCCTGACCACCCAGTCGGCGTCCAACCATAGCT
ACCCCAAAGTCTTCTACAATAGACTGCCAAAGTGTGGAAGCACCAGTGTC
AAAATGCTCATCAGGGAACTGAAAAAGAGGAACGGATTCAAATTCTTTGA
AGACAAAGATTACGAAATCCAGGTTCTCCGCGGCAGAAACCTGGTGAGTT
TAGAATGGTATAACCTTCTGTATATATCTAATGTACCCGCTAGGGTGGCA
ACGGAACCATCTGGTTGTTGCTGGCATGCTTTTGTTTTTGCAGTTACGAA
GTGAAACAGTACTGGGATGTATATAGGTGCGGAATACACATTTCATGTGG
CATACCTAGTCTTATGTAACGTTAGCCTAATATTTATTGAGAAATAACTG
TCATTGTCAATGCATGTTACGTTATATGTATATGTTTATTTAGATACATA
TTCACGATCAAATAAGCGTGTGTAGCTTTGATGGTGACAGTCAATTCTAT
CCTTCGATTTCAGAGACAATTTGCACAGATGGTCGACAGACTCCCAACTC
CATCTATTTATGACAAGCACATCTTCTATGTAGACTTCCACCAGTAAGTA
CTCAATGTCCCATGATTAGCCGCTGTAGAATTTCAGTCGTTGAACTTGTA
GGGCTCTTGCCAGAAATTTTCCAATGCCGATAATGTATCAATTATGGTTT
CATGATCACTTATCAAACAGTCAAATTTCAACAGCATTTACGATAAACTG
TATTTTCAACACATATTTTCTGCTATAAGACAAGTTGGTGTTCCTATAGA
CCAACTCAATCTCTAGTTCAGGTACAAGCGCAGATCACAGTATTTGATTG
CTTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTAAGCAA
ATCCATGAGCATTATACGTTACGTGTTTCTCTGCCTACCCTTCAAGGTTC
GGGTTGCAGCAGCCCAAGTACATTAACCTAGTCCGGGACCCCTTGGAGCA
GCGGATCTCTGACTACTACTACATGCGGTTTGGCCGACACGGAGACAACC
AAACGGCACAACAACGCCAACGACGAACAGACGAAGAAAGAGCACAGGTT
TCAGTTTTACCCAAAAGCTGTGAAGGACTCAGTGATACTTTGACACCGAT
CTAAAAATATATAGCTAGTAATTGTAACATCGATTCTATAGGCCTGAGTC
TACAAGACAATCGTTTTTTCTATGATTCCAAATTATTTCGCTGTTTCTAA
AATCCAATGCAAAAGAAACAACTTCTGCCACACACATTTAAACGAACGTC
TATTTTGTAACAGTTTCTACGCCTACAACTGTTTCTAAAACGCTATGAAG
AGTACAAGGCTACAGCAAAGTTAAAGAGATATGTCGTGGGGTGAAGAATA
ACCATCACTTTTTTGTCTTTCCAGACATTTGATGAGTGTGTTTTCAACAA
CCTGTGGGAGTGCAATGCCTCTGGTGCCAAAGGATTTCTGATGACCCAGT
TTTTCTGTGGACAGGATTCAATATGCATGTTCGTGCGGTGTGAAATCTAA
CAAATTAGACATATCTCATACAATAGTCAACTACTCAGCAGGAAAAAAAA
CACATTATGAAGAAGTGTCATAGGACAGATAAAGAAGTCTGTAGATATAA
AGCACCTCAAGTAAAGGCCTATTGCGAATTCCATTTTCAGGTAGAGTTCT
CTGCTGCTAAATGTCTTCTCCACAACTTTTGAAACTGTAACAATTGTTGT
ATGGTTACGTTCTAACGTGGCAAATCGTTGTTATAATCATAAACTCACGT
GATGTTACAGTGATGTTGGCATTAATCAGAAGAGCTTTGTTCTAGGGAGC
CTTCCCAGTTGGCAGTGGAAAGAGCCAAAGAGAACATCAGGAGACACTAC
GCTGTGGTCGGGGTACTGGAGGAGTTTAGCAGCTTCCTGAAGGTCCTGGA
GGTGGTCATGCCGCAGTTCTTCCGTGGAGCCCAGGAAACATGGCGGGAAA
TTGGTAGGTAGTATTTATTAATGGAAGCGCAAAGATGGGGGACAAGCCTA
CATGAAACTTTGGAATTGGTTGTTCACCGTTGTTGTAATGGTTTTGGACG
AAACACTGACTGTTGCAATGTGCTATATAACATATGGAATTGGATGTGTA
TAGAAAGACGAATGCGGATGTAAAAATTGATGAAGATATTAGTAACGCAG
ATGTGAGTGAGGTGAGTGAGGTGAGGTAACGAAGAATAGACGTCCAAGAA
GTGGCTGTGATCGTTATACATGCAGTCAATTGCTCATGATGGTACGTTTC
CTGACACATTCGTTTTACACTCCAGAGTCGCAGCAAATGGAACACCAGAA
AACGGCCAAAAAGATTCCCCCTTCTGGGAAGGCTCGGTATATCATGAGAC
AAAGATTGCACCTGGACTATCAAGTGTACGACTTCATAAAGGAGAGATTC
CACATGCAGAAAACACAGCTAGGAATAAAGGACTGA Coding sequence (CDS) from alignment at Sc0000181:230784..234019+ >transcript:BL95866_evm2 ID=transcript:BL95866_evm2|Name=transcript:BL95866_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=6951bp|location=Sequence derived from alignment at Sc0000181:230784..234019+ (Branchiostoma lanceolatum)
ATGGCATCGCTGGCGATCATCAGGCGTTTAGGAGCCCTTATAGTGTTCTT
CGCAGTGATCTCAGTTTGGACAACACTACAGCTTTACCGTGACGTTAAGA
TAGGTGAAGAGAACCCCGGAGCGCCAATACAAACGTGGGTTGGACATGTC
CAGGACCAGAAGCCCCTGACCACCCAGTCGGCGTCCAACCATAGCTACCC
CAAAGTCTTCTACAATAGACTGCCAAAGTGTGGAAGCACCAGTGTCAAAA
TGCTCATCAGGGAACTGAAAAAGAGGAACGGATTCAAATTCTTTGAAGAC
AAAGATTACGAAATCCAGGTTCTCCGCGGCAGAAACCTGAGACAATTTGC
ACAGATGGTCGACAGACTCCCAACTCCATCTATTTATGACAAGCACATCT
TCTATGTAGACTTCCACCAGTTCGGGTTGCAGCAGCCCAAGTACATTAAC
CTAGTCCGGGACCCCTTGGAGCAGCGGATCTCTGACTACTACTACATGCG
GTTTGGCCGACACGGAGACAACCAAACGGCACAACAACGCCAACGACGAA
CAGACGAAGAAAGAGCACAGACATTTGATGAGTGTGTTTTCAACAACCTG
TGGGAGTGCAATGCCTCTGGTGCCAAAGGATTTCTGATGACCCAGTTTTT
CTGTGGACAGGATTCAATATGCATGGAGCCTTCCCAGTTGGCAGTGGAAA
GAGCCAAAGAGAACATCAGGAGACACTACGCTGTGGTCGGGGTACTGGAG
GAGTTTAGCAGCTTCCTGAAGGTCCTGGAGGTGGTCATGCCGCAGTTCTT
CCGTGGAGCCCAGGAAACATGGCGGGAAATTGAGTCGCAGCAAATGGAAC
ACCAGAAAACGGCCAAAAAGATTCCCCCTTCTGGGAAGGCTCGGTATATC
ATGAGACAAAGATTGCACCTGGACTATCAAGTGTACGACTTCATAAAGGA
GAGATTCCACATGCAGAAAACACAGCTAGGAATAAAGGACTGAATGGCAT
CGCTGGCGATCATCAGGCGTTTAGGAGCCCTTATAGTGTTCTTCGCAGTG
ATCTCAGTTTGGACAACACTACAGCTTTACCGTGACGTTAAGATAGGTGA
AGAGAACCCCGGAGCGCCAATACAAACGTGGGTTGGACATGTCCAGGACC
AGAAGCCCCTGACCACCCAGTCGGCGTCCAACCATAGCTACCCCAAAGTC
TTCTACAATAGACTGCCAAAGTGTGGAAGCACCAGTGTCAAAATGCTCAT
CAGGGAACTGAAAAAGAGGAACGGATTCAAATTCTTTGAAGACAAAGATT
ACGAAATCCAGGTTCTCCGCGGCAGAAACCTGAGACAATTTGCACAGATG
GTCGACAGACTCCCAACTCCATCTATTTATGACAAGCACATCTTCTATGT
AGACTTCCACCAGTTCGGGTTGCAGCAGCCCAAGTACATTAACCTAGTCC
GGGACCCCTTGGAGCAGCGGATCTCTGACTACTACTACATGCGGTTTGGC
CGACACGGAGACAACCAAACGGCACAACAACGCCAACGACGAACAGACGA
AGAAAGAGCACAGACATTTGATGAGTGTGTTTTCAACAACCTGTGGGAGT
GCAATGCCTCTGGTGCCAAAGGATTTCTGATGACCCAGTTTTTCTGTGGA
CAGGATTCAATATGCATGGAGCCTTCCCAGTTGGCAGTGGAAAGAGCCAA
AGAGAACATCAGGAGACACTACGCTGTGGTCGGGGTACTGGAGGAGTTTA
GCAGCTTCCTGAAGGTCCTGGAGGTGGTCATGCCGCAGTTCTTCCGTGGA
GCCCAGGAAACATGGCGGGAAATTGAGTCGCAGCAAATGGAACACCAGAA
AACGGCCAAAAAGATTCCCCCTTCTGGGAAGGCTCGGTATATCATGAGAC
AAAGATTGCACCTGGACTATCAAGTGTACGACTTCATAAAGGAGAGATTC
CACATGCAGAAAACACAGCTAGGAATAAAGGACTGAATGGCATCGCTGGC
GATCATCAGGCGTTTAGGAGCCCTTATAGTGTTCTTCGCAGTGATCTCAG
TTTGGACAACACTACAGCTTTACCGTGACGTTAAGATAGGTGAAGAGAAC
CCCGGAGCGCCAATACAAACGTGGGTTGGACATGTCCAGGACCAGAAGCC
CCTGACCACCCAGTCGGCGTCCAACCATAGCTACCCCAAAGTCTTCTACA
ATAGACTGCCAAAGTGTGGAAGCACCAGTGTCAAAATGCTCATCAGGGAA
CTGAAAAAGAGGAACGGATTCAAATTCTTTGAAGACAAAGATTACGAAAT
CCAGGTTCTCCGCGGCAGAAACCTGAGACAATTTGCACAGATGGTCGACA
GACTCCCAACTCCATCTATTTATGACAAGCACATCTTCTATGTAGACTTC
CACCAGTTCGGGTTGCAGCAGCCCAAGTACATTAACCTAGTCCGGGACCC
CTTGGAGCAGCGGATCTCTGACTACTACTACATGCGGTTTGGCCGACACG
GAGACAACCAAACGGCACAACAACGCCAACGACGAACAGACGAAGAAAGA
GCACAGACATTTGATGAGTGTGTTTTCAACAACCTGTGGGAGTGCAATGC
CTCTGGTGCCAAAGGATTTCTGATGACCCAGTTTTTCTGTGGACAGGATT
CAATATGCATGGAGCCTTCCCAGTTGGCAGTGGAAAGAGCCAAAGAGAAC
ATCAGGAGACACTACGCTGTGGTCGGGGTACTGGAGGAGTTTAGCAGCTT
CCTGAAGGTCCTGGAGGTGGTCATGCCGCAGTTCTTCCGTGGAGCCCAGG
AAACATGGCGGGAAATTGAGTCGCAGCAAATGGAACACCAGAAAACGGCC
AAAAAGATTCCCCCTTCTGGGAAGGCTCGGTATATCATGAGACAAAGATT
GCACCTGGACTATCAAGTGTACGACTTCATAAAGGAGAGATTCCACATGC
AGAAAACACAGCTAGGAATAAAGGACTGAATGGCATCGCTGGCGATCATC
AGGCGTTTAGGAGCCCTTATAGTGTTCTTCGCAGTGATCTCAGTTTGGAC
AACACTACAGCTTTACCGTGACGTTAAGATAGGTGAAGAGAACCCCGGAG
CGCCAATACAAACGTGGGTTGGACATGTCCAGGACCAGAAGCCCCTGACC
ACCCAGTCGGCGTCCAACCATAGCTACCCCAAAGTCTTCTACAATAGACT
GCCAAAGTGTGGAAGCACCAGTGTCAAAATGCTCATCAGGGAACTGAAAA
AGAGGAACGGATTCAAATTCTTTGAAGACAAAGATTACGAAATCCAGGTT
CTCCGCGGCAGAAACCTGAGACAATTTGCACAGATGGTCGACAGACTCCC
AACTCCATCTATTTATGACAAGCACATCTTCTATGTAGACTTCCACCAGT
TCGGGTTGCAGCAGCCCAAGTACATTAACCTAGTCCGGGACCCCTTGGAG
CAGCGGATCTCTGACTACTACTACATGCGGTTTGGCCGACACGGAGACAA
CCAAACGGCACAACAACGCCAACGACGAACAGACGAAGAAAGAGCACAGA
CATTTGATGAGTGTGTTTTCAACAACCTGTGGGAGTGCAATGCCTCTGGT
GCCAAAGGATTTCTGATGACCCAGTTTTTCTGTGGACAGGATTCAATATG
CATGGAGCCTTCCCAGTTGGCAGTGGAAAGAGCCAAAGAGAACATCAGGA
GACACTACGCTGTGGTCGGGGTACTGGAGGAGTTTAGCAGCTTCCTGAAG
GTCCTGGAGGTGGTCATGCCGCAGTTCTTCCGTGGAGCCCAGGAAACATG
GCGGGAAATTGAGTCGCAGCAAATGGAACACCAGAAAACGGCCAAAAAGA
TTCCCCCTTCTGGGAAGGCTCGGTATATCATGAGACAAAGATTGCACCTG
GACTATCAAGTGTACGACTTCATAAAGGAGAGATTCCACATGCAGAAAAC
ACAGCTAGGAATAAAGGACTGAATGGCATCGCTGGCGATCATCAGGCGTT
TAGGAGCCCTTATAGTGTTCTTCGCAGTGATCTCAGTTTGGACAACACTA
CAGCTTTACCGTGACGTTAAGATAGGTGAAGAGAACCCCGGAGCGCCAAT
ACAAACGTGGGTTGGACATGTCCAGGACCAGAAGCCCCTGACCACCCAGT
CGGCGTCCAACCATAGCTACCCCAAAGTCTTCTACAATAGACTGCCAAAG
TGTGGAAGCACCAGTGTCAAAATGCTCATCAGGGAACTGAAAAAGAGGAA
CGGATTCAAATTCTTTGAAGACAAAGATTACGAAATCCAGGTTCTCCGCG
GCAGAAACCTGAGACAATTTGCACAGATGGTCGACAGACTCCCAACTCCA
TCTATTTATGACAAGCACATCTTCTATGTAGACTTCCACCAGTTCGGGTT
GCAGCAGCCCAAGTACATTAACCTAGTCCGGGACCCCTTGGAGCAGCGGA
TCTCTGACTACTACTACATGCGGTTTGGCCGACACGGAGACAACCAAACG
GCACAACAACGCCAACGACGAACAGACGAAGAAAGAGCACAGACATTTGA
TGAGTGTGTTTTCAACAACCTGTGGGAGTGCAATGCCTCTGGTGCCAAAG
GATTTCTGATGACCCAGTTTTTCTGTGGACAGGATTCAATATGCATGGAG
CCTTCCCAGTTGGCAGTGGAAAGAGCCAAAGAGAACATCAGGAGACACTA
CGCTGTGGTCGGGGTACTGGAGGAGTTTAGCAGCTTCCTGAAGGTCCTGG
AGGTGGTCATGCCGCAGTTCTTCCGTGGAGCCCAGGAAACATGGCGGGAA
ATTGAGTCGCAGCAAATGGAACACCAGAAAACGGCCAAAAAGATTCCCCC
TTCTGGGAAGGCTCGGTATATCATGAGACAAAGATTGCACCTGGACTATC
AAGTGTACGACTTCATAAAGGAGAGATTCCACATGCAGAAAACACAGCTA
GGAATAAAGGACTGAATGGCATCGCTGGCGATCATCAGGCGTTTAGGAGC
CCTTATAGTGTTCTTCGCAGTGATCTCAGTTTGGACAACACTACAGCTTT
ACCGTGACGTTAAGATAGGTGAAGAGAACCCCGGAGCGCCAATACAAACG
TGGGTTGGACATGTCCAGGACCAGAAGCCCCTGACCACCCAGTCGGCGTC
CAACCATAGCTACCCCAAAGTCTTCTACAATAGACTGCCAAAGTGTGGAA
GCACCAGTGTCAAAATGCTCATCAGGGAACTGAAAAAGAGGAACGGATTC
AAATTCTTTGAAGACAAAGATTACGAAATCCAGGTTCTCCGCGGCAGAAA
CCTGAGACAATTTGCACAGATGGTCGACAGACTCCCAACTCCATCTATTT
ATGACAAGCACATCTTCTATGTAGACTTCCACCAGTTCGGGTTGCAGCAG
CCCAAGTACATTAACCTAGTCCGGGACCCCTTGGAGCAGCGGATCTCTGA
CTACTACTACATGCGGTTTGGCCGACACGGAGACAACCAAACGGCACAAC
AACGCCAACGACGAACAGACGAAGAAAGAGCACAGACATTTGATGAGTGT
GTTTTCAACAACCTGTGGGAGTGCAATGCCTCTGGTGCCAAAGGATTTCT
GATGACCCAGTTTTTCTGTGGACAGGATTCAATATGCATGGAGCCTTCCC
AGTTGGCAGTGGAAAGAGCCAAAGAGAACATCAGGAGACACTACGCTGTG
GTCGGGGTACTGGAGGAGTTTAGCAGCTTCCTGAAGGTCCTGGAGGTGGT
CATGCCGCAGTTCTTCCGTGGAGCCCAGGAAACATGGCGGGAAATTGAGT
CGCAGCAAATGGAACACCAGAAAACGGCCAAAAAGATTCCCCCTTCTGGG
AAGGCTCGGTATATCATGAGACAAAGATTGCACCTGGACTATCAAGTGTA
CGACTTCATAAAGGAGAGATTCCACATGCAGAAAACACAGCTAGGAATAA
AGGACTGAATGGCATCGCTGGCGATCATCAGGCGTTTAGGAGCCCTTATA
GTGTTCTTCGCAGTGATCTCAGTTTGGACAACACTACAGCTTTACCGTGA
CGTTAAGATAGGTGAAGAGAACCCCGGAGCGCCAATACAAACGTGGGTTG
GACATGTCCAGGACCAGAAGCCCCTGACCACCCAGTCGGCGTCCAACCAT
AGCTACCCCAAAGTCTTCTACAATAGACTGCCAAAGTGTGGAAGCACCAG
TGTCAAAATGCTCATCAGGGAACTGAAAAAGAGGAACGGATTCAAATTCT
TTGAAGACAAAGATTACGAAATCCAGGTTCTCCGCGGCAGAAACCTGAGA
CAATTTGCACAGATGGTCGACAGACTCCCAACTCCATCTATTTATGACAA
GCACATCTTCTATGTAGACTTCCACCAGTTCGGGTTGCAGCAGCCCAAGT
ACATTAACCTAGTCCGGGACCCCTTGGAGCAGCGGATCTCTGACTACTAC
TACATGCGGTTTGGCCGACACGGAGACAACCAAACGGCACAACAACGCCA
ACGACGAACAGACGAAGAAAGAGCACAGACATTTGATGAGTGTGTTTTCA
ACAACCTGTGGGAGTGCAATGCCTCTGGTGCCAAAGGATTTCTGATGACC
CAGTTTTTCTGTGGACAGGATTCAATATGCATGGAGCCTTCCCAGTTGGC
AGTGGAAAGAGCCAAAGAGAACATCAGGAGACACTACGCTGTGGTCGGGG
TACTGGAGGAGTTTAGCAGCTTCCTGAAGGTCCTGGAGGTGGTCATGCCG
CAGTTCTTCCGTGGAGCCCAGGAAACATGGCGGGAAATTGAGTCGCAGCA
AATGGAACACCAGAAAACGGCCAAAAAGATTCCCCCTTCTGGGAAGGCTC
GGTATATCATGAGACAAAGATTGCACCTGGACTATCAAGTGTACGACTTC
ATAAAGGAGAGATTCCACATGCAGAAAACACAGCTAGGAATAAAGGACTG
A
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000181 | genome | Sc0000181:230784..234019 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95866_evm2 |
| Biotype | protein_coding |
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