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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95839_evm1 >transcript:BL95839_evm1-protein ID=transcript:BL95839_evm1-protein|Name=transcript:BL95839_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=322bp
MPRARRTSRVRRRRRQLSEADLRLRMAVANGDISELRAWTSDGDVNELDS
SGWSLLHLAASRGRERCVRVLLEHGALAAVQDSIGGFTSLHYAAMHGRTR
IARLILDCQHSDAVINACSNDGWTPMHVAAHYGRDDFIRVLVDYRAKVDA
LSDKGTTPLQLALIRNRFSCVNLLLDAGADINIQSGFPLRYSVIKGYLPL
GRTLLQRGAEPNLGRPEDGETPLHLAALKNDLNFARLLYEFGGDMYKRNY
DGQTPIATAKMVEDRSRPLLDFLLEASRSCRSLQNLCRLTIRRAIGHRRL
EKIHQLPTATVMVDFLRHKFED Run BLAST on NCBI mRNA from alignment at Sc0000155:134707..137265- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95839_evm1 ID=transcript:BL95839_evm1|Name=transcript:BL95839_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2559bp|location=Sequence derived from alignment at Sc0000155:134707..137265- (Branchiostoma lanceolatum)
ATGCCTCGGGCCAGACGGACGTCCCGAGTACGGAGGAGAAGGCGGCAACT
GTCGGAGGCCGACCTGAGACTCCGAATGGCGGTAGCGAATGGCGACATCA
GTGAACTACGTGCCTGGACGTCGGACGGAGACGTGAACGAGTTGGACTCG
AGCGGCTGGTCTCTACTTCACCTGGCGGCGTCTAGAGGGAGGGAGAGATG
TGTCAGGGTCCTCCTGGAACACGGAGGTACTAAAAACTACTTTACATGGG
CAGGTGTATTAAACCGTACGTGTAACAAAAAGAAGGTGTGGCGCTTGATT
AGGTTTACGTGTAACTGTCAACTTGTGAGTGTGGCGGCAACTGTGGCCAA
ATAAACTTTCGTAGAATGAACGGTTAGTAAGATTAGTAGAAGTTCTCTGT
TTGCAATATGATCATTCTCTTGTGGAGCAATTCTGAAATTTTGCGATTGT
TTTGCTACTCGTGGGTAGTAATATCAACATTAACATTATTCTAGCTTCTT
TTAAATGATAGACACCATTGTGCTTTTGGTAGCAATAATTCAGTCACTGT
GGTACAAACGTGTATGAAAAATGCTTTGCATCTTCATCGTTCTAATAACT
TCATCAGACCTAAGAAAAGAAGGAAACAGCACAGCACCATGTTGATAACA
TAATGCCTAATATCTTAAATTCTCCAGCATTGGCAGCTGTGCAGGATTCC
ATTGGCGGCTTCACGTCTCTTCACTACGCGGCCATGCACGGGAGGACTCG
CATTGCCAGACTCATACTCGACTGCCAACATTCCGACGCCGTCATCAACG
CCTGCAGCAACGACGGCTGGACCCCCATGCACGTGGCCGCGCACTACGGG
CGCGATGACTTCATCCGCGTGCTGGTGGACTACCGGGCAAAAGTAGACGC
TCTAAGCGACAAGGGAACCACACCGCTTCAGTTAGCCTTGATCAGGAATA
GGTTCTCTTGTGTCAATCTCTTATTGGATGCGGGTGCAGACATCAACATC
CAATCAGGTTTCCCCCTGAGATACTCTGTGATTAAAGGTTACCTCCCATT
GGGCAGGACGCTCCTCCAGAGGGGGGCTGAACCCAACCTGGGACGGCCGG
AGGATGGGGAGACGCCACTCCATCTAGCCGCTCTGAAAAATGACCTCAAT
TTTGCGAGGCTGTTGTATGAATTCGGAGGGGACATGTATAAGAGGAACTA
TGACGGACAAACGCCCATAGCTACAGCAAAAATGGTGGAGGACAGGAGCA
GGCCGCTCTTAGATTTCCTTCTAGAGGCATCAAGTAAGCAATGGATACTG
ATGTATCAGCTGTCTGTGATTTTATCCATATCAGTAATACTTGCCAATCA
GGCTAGGTCTGTGATGGTACCAAGGATCTTATCTGAATTATACCGGTATT
ATAAATCCAAGAACATTATTTCTATTATTCATAGGCATGGTAACAGGTAG
ATAGGTAAGATGTCATAGAATATAGAATTTTGTGTAATCACCTGTTTTGT
TCATTTTGAATACTAGAACTCTTTACTACATACTTGAAGAATCAAAATTA
AAACATACCTTATATGTTGNTATCAACGCCTGCAGCAACGACGGCTGGAC
CCCCATGCACGTGGCCGCGCACTACGGGCGCGACGACTTCATCCGCGTGC
TGGTGGACTACCGGGCAAAAGTAGACGCTCTAAGCGACAAGGGAACCACA
CCGCTTCAGTTAGCCTTGATCAGGAATAGGTTCTCTTGTGTCAATCTCTT
ATTGGATGCGGGTGCAGACATCAACATCCAATCAGGTTTCCCCCTGAGAT
ACTCTGTGATTAAAGGTTACCTCCCATTGGGCAGGACGCTCCTCCAGAGG
GGGGCTGAACCCAACCTGGGACGGCCGGAGGATGGGGAGACGCCACTCCA
TCTAGCCGCTCTGAAAAATGACCTCAATTTTGCGAGGCTGTTGTATGAAT
TCGGAGGGGACATGTATAAGAGGAACTATGACGGACAAACGCCCATAGCT
ACAGCAAAAATGGTGGAGGACAGGAGCAGGCCGCTGTTAGATTTCCTTCT
AGAGGCATCAAGTAAGCAATGGATACTGATGTATCAGCTGTCTGTGATTT
TAACCATATCAGTAATACTTGCTAATCAGGCTAGGTCTGTGATGGCGACT
AACTCGGACCAAGGATCTTCTTTGAATTATACCGGTATTATAAATCCAAG
AACATTATTTTGAATAATCATAGGCATAGTAACTGGTAGATAGGTAAGAT
GTCATAGAATATAGAATTTTGTGTAATTCCTTGTTTTGTTCATTTTGAAT
ACTAGAACTCTGTACTACATACTTGAATCAAAATGAAAACATACCTTTTA
TGTTGATAGAACCTGAATATTGTCAAACTAAGTCTCAGTAGATATCTCAC
TGCATTTTTTTAAAACTTCCAGGGAGCTGCAGAAGTCTACAGAACCTGTG
CCGTCTGACGATTAGAAGAGCCATAGGCCACAGGCGCCTGGAGAAAATAC
ACCAACTGCCGACGGCCACGGTCATGGTCGACTTTCTCAGGCACAAGTTT
GAGGACTGA Coding sequence (CDS) from alignment at Sc0000155:134707..137265- >transcript:BL95839_evm1 ID=transcript:BL95839_evm1|Name=transcript:BL95839_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2907bp|location=Sequence derived from alignment at Sc0000155:134707..137265- (Branchiostoma lanceolatum)
ATGCCTCGGGCCAGACGGACGTCCCGAGTACGGAGGAGAAGGCGGCAACT
GTCGGAGGCCGACCTGAGACTCCGAATGGCGGTAGCGAATGGCGACATCA
GTGAACTACGTGCCTGGACGTCGGACGGAGACGTGAACGAGTTGGACTCG
AGCGGCTGGTCTCTACTTCACCTGGCGGCGTCTAGAGGGAGGGAGAGATG
TGTCAGGGTCCTCCTGGAACACGGAGCATTGGCAGCTGTGCAGGATTCCA
TTGGCGGCTTCACGTCTCTTCACTACGCGGCCATGCACGGGAGGACTCGC
ATTGCCAGACTCATACTCGACTGCCAACATTCCGACGCCGTCATCAACGC
CTGCAGCAACGACGGCTGGACCCCCATGCACGTGGCCGCGCACTACGGGC
GCGATGACTTCATCCGCGTGCTGGTGGACTACCGGGCAAAAGTAGACGCT
CTAAGCGACAAGGGAACCACACCGCTTCAGTTAGCCTTGATCAGGAATAG
GTTCTCTTGTGTCAATCTCTTATTGGATGCGGGTGCAGACATCAACATCC
AATCAGGTTTCCCCCTGAGATACTCTGTGATTAAAGGTTACCTCCCATTG
GGCAGGACGCTCCTCCAGAGGGGGGCTGAACCCAACCTGGGACGGCCGGA
GGATGGGGAGACGCCACTCCATCTAGCCGCTCTGAAAAATGACCTCAATT
TTGCGAGGCTGTTGTATGAATTCGGAGGGGACATGTATAAGAGGAACTAT
GACGGACAAACGCCCATAGCTACAGCAAAAATGGTGGAGGACAGGAGCAG
GCCGCTCTTAGATTTCCTTCTAGAGGCATCAAGGAGCTGCAGAAGTCTAC
AGAACCTGTGCCGTCTGACGATTAGAAGAGCCATAGGCCACAGGCGCCTG
GAGAAAATACACCAACTGCCGACGGCCACGGTCATGGTCGACTTTCTCAG
GCACAAGTTTGAGGACTGAATGCCTCGGGCCAGACGGACGTCCCGAGTAC
GGAGGAGAAGGCGGCAACTGTCGGAGGCCGACCTGAGACTCCGAATGGCG
GTAGCGAATGGCGACATCAGTGAACTACGTGCCTGGACGTCGGACGGAGA
CGTGAACGAGTTGGACTCGAGCGGCTGGTCTCTACTTCACCTGGCGGCGT
CTAGAGGGAGGGAGAGATGTGTCAGGGTCCTCCTGGAACACGGAGCATTG
GCAGCTGTGCAGGATTCCATTGGCGGCTTCACGTCTCTTCACTACGCGGC
CATGCACGGGAGGACTCGCATTGCCAGACTCATACTCGACTGCCAACATT
CCGACGCCGTCATCAACGCCTGCAGCAACGACGGCTGGACCCCCATGCAC
GTGGCCGCGCACTACGGGCGCGATGACTTCATCCGCGTGCTGGTGGACTA
CCGGGCAAAAGTAGACGCTCTAAGCGACAAGGGAACCACACCGCTTCAGT
TAGCCTTGATCAGGAATAGGTTCTCTTGTGTCAATCTCTTATTGGATGCG
GGTGCAGACATCAACATCCAATCAGGTTTCCCCCTGAGATACTCTGTGAT
TAAAGGTTACCTCCCATTGGGCAGGACGCTCCTCCAGAGGGGGGCTGAAC
CCAACCTGGGACGGCCGGAGGATGGGGAGACGCCACTCCATCTAGCCGCT
CTGAAAAATGACCTCAATTTTGCGAGGCTGTTGTATGAATTCGGAGGGGA
CATGTATAAGAGGAACTATGACGGACAAACGCCCATAGCTACAGCAAAAA
TGGTGGAGGACAGGAGCAGGCCGCTCTTAGATTTCCTTCTAGAGGCATCA
AGGAGCTGCAGAAGTCTACAGAACCTGTGCCGTCTGACGATTAGAAGAGC
CATAGGCCACAGGCGCCTGGAGAAAATACACCAACTGCCGACGGCCACGG
TCATGGTCGACTTTCTCAGGCACAAGTTTGAGGACTGAATGCCTCGGGCC
AGACGGACGTCCCGAGTACGGAGGAGAAGGCGGCAACTGTCGGAGGCCGA
CCTGAGACTCCGAATGGCGGTAGCGAATGGCGACATCAGTGAACTACGTG
CCTGGACGTCGGACGGAGACGTGAACGAGTTGGACTCGAGCGGCTGGTCT
CTACTTCACCTGGCGGCGTCTAGAGGGAGGGAGAGATGTGTCAGGGTCCT
CCTGGAACACGGAGCATTGGCAGCTGTGCAGGATTCCATTGGCGGCTTCA
CGTCTCTTCACTACGCGGCCATGCACGGGAGGACTCGCATTGCCAGACTC
ATACTCGACTGCCAACATTCCGACGCCGTCATCAACGCCTGCAGCAACGA
CGGCTGGACCCCCATGCACGTGGCCGCGCACTACGGGCGCGATGACTTCA
TCCGCGTGCTGGTGGACTACCGGGCAAAAGTAGACGCTCTAAGCGACAAG
GGAACCACACCGCTTCAGTTAGCCTTGATCAGGAATAGGTTCTCTTGTGT
CAATCTCTTATTGGATGCGGGTGCAGACATCAACATCCAATCAGGTTTCC
CCCTGAGATACTCTGTGATTAAAGGTTACCTCCCATTGGGCAGGACGCTC
CTCCAGAGGGGGGCTGAACCCAACCTGGGACGGCCGGAGGATGGGGAGAC
GCCACTCCATCTAGCCGCTCTGAAAAATGACCTCAATTTTGCGAGGCTGT
TGTATGAATTCGGAGGGGACATGTATAAGAGGAACTATGACGGACAAACG
CCCATAGCTACAGCAAAAATGGTGGAGGACAGGAGCAGGCCGCTCTTAGA
TTTCCTTCTAGAGGCATCAAGGAGCTGCAGAAGTCTACAGAACCTGTGCC
GTCTGACGATTAGAAGAGCCATAGGCCACAGGCGCCTGGAGAAAATACAC
CAACTGCCGACGGCCACGGTCATGGTCGACTTTCTCAGGCACAAGTTTGA
GGACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000155 | genome | Sc0000155:134707..137265 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95839_evm1 |
| Biotype | protein_coding |
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