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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95812_evm1 >transcript:BL95812_evm1-protein ID=transcript:BL95812_evm1-protein|Name=transcript:BL95812_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=200bp
MTMARYIIPLVVVLVICQTTCTYGATETASTMTNTTGGGDSGHGDGGHKM
YFFFGHTGITVLFYEWKIDSVAALIGSCIGVFAIAVLYEGFRVWREMLMV
RAHDSNAASQSIELLTNAKKSSYTLDFIPSAKTRDQICNSMHALQSLLHI
VQVLVSYGLMLVFMTFNVWLCLSVALGAGVGYFAFGWRKSTTIDRNEHCH Run BLAST on NCBI mRNA from alignment at Sc0000135:172636..174339- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95812_evm1 ID=transcript:BL95812_evm1|Name=transcript:BL95812_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=1704bp|location=Sequence derived from alignment at Sc0000135:172636..174339- (Branchiostoma lanceolatum)
ATGACGATGGCACGATATATCATCCCGCTGGTTGTGGTCCTAGTCATCTG
CCAAACTACATGTACCTATGGGGCCACGGAGACAGTAAGTACCAACAAAA
ACATAAAATATGGTTCACTGTCATCATACGTGTACAACAACCATAATCTG
TGACGGAAATGATAGTCTCTGTGCAATTTATTCAACAATAGATGAATCTA
AGTACCCTGTAGAAAATAGAATGACGAAACAAAGTAACATGGACGAGATT
TTCGACGTCAGTCTACTAGTATCATTTAGGCTACTAGTATCATATGTTGT
TGTGCCATGTAATGTCTATCCAAGCACATTTTCGCCTTTCGTTTTTGTGT
GCATCTTTAATGGTGGCCTCCATGACATTGCGTTTTTCCATTGCTGTTCG
TAATAATCAGGATATCGTACGTTGTGCACCAAATAGGCAAGTACCATGAC
GAACACTACAGGTGGAGGCGATTCAGGTCATGGCGACGGGGTAAGAAGAA
CGCCATTCGTGGCTTTTTGAATTCAAGAATCCGGGTATTTGTACAGTGTT
GTATACTCTCAGCAGTCTTCTGTGATTGAGATGCATGTATGACAAACGCT
ATATTTCAAATGGAACATCCATTTACTCAGCCTTTACCGATAGTTTGTAT
TGGAAAGCAAATGAATTAAAAATCTGTCCATCGGCTCCCAGATTTTCTCA
CTGGAAAGAATTGTTTGCTTTGTAAGCGTGAACGAGAGCGTCTCGCACGT
TAGTTATTGATTCAGTGACGAATTGTCTGGCACTACTTCAGGGACACAAG
ATGTACTTCTTCTTCGGTCACACCGGAATCACCGTCCTGTTCTACGAGTG
GAAAATAGACTCAGTAGCTGGTGAGTGCTTATAAAATAACACACCGTATC
TAGTTCCAAGTTTTAAGAAAATAATGTCATAGCATTAGATGTTACAATGT
ACTTTGGCTTAGCTGTAGAGATCCCACGTATAACAAGTGATGGCGATAGC
AAATTTAGCAGAAAAGCTCTGAAGATAACCCTTGCTTCAGAGTGATGACA
TTATACCCATTCAGTTTTCTGGGATTTTGAATTTTTTTTGCTTTGGAGTA
CACTTAGAGACATCCTTTCTTTCTCTTTGATTTTTGTACGTGTTGTATGG
AATGACAGATATGATTGTCAACACACAGCTCTAATTGGCTCCTGTATCGG
AGTGTTCGCCATCGCCGTGTTGTACGAAGGCTTCAGGGTTTGGCGGGAAA
TGTTGATGGTCCGGGCACACGACAGTAATGCGGCCTCTCAAAGCATCGAG
CTGCTCACCAACGCGAAGAAATCAAGCTATACACTGGACTTCATACCCTC
AGCAAAGACAAGGTGAATATTATCATTAGAACACGGTCTTGCGGGTCTTC
TCTTACACGGTCTTTTCTTCTGTAGTGACTTCTCTCTAATTTCGTGAGGC
CATGTTCATTCATACAACACTGAATAGTATGTACCTCAATCCTATTTTCC
AGGGATCAGATCTGTAACAGCATGCACGCGCTACAGTCTCTCCTGCACAT
CGTCCAGGTGCTGGTCAGCTACGGGCTGATGTTGGTCTTCATGACGTTTA
ACGTGTGGCTGTGTCTGTCCGTGGCGCTCGGGGCAGGGGTCGGGTACTTC
GCCTTCGGCTGGCGCAAGTCCACCACCATAGACCGGAACGAACATTGTCA
TTGA Coding sequence (CDS) from alignment at Sc0000135:172636..174339- >transcript:BL95812_evm1 ID=transcript:BL95812_evm1|Name=transcript:BL95812_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3015bp|location=Sequence derived from alignment at Sc0000135:172636..174339- (Branchiostoma lanceolatum)
ATGACGATGGCACGATATATCATCCCGCTGGTTGTGGTCCTAGTCATCTG
CCAAACTACATGTACCTATGGGGCCACGGAGACAGCAAGTACCATGACGA
ACACTACAGGTGGAGGCGATTCAGGTCATGGCGACGGGGGACACAAGATG
TACTTCTTCTTCGGTCACACCGGAATCACCGTCCTGTTCTACGAGTGGAA
AATAGACTCAGTAGCTGCTCTAATTGGCTCCTGTATCGGAGTGTTCGCCA
TCGCCGTGTTGTACGAAGGCTTCAGGGTTTGGCGGGAAATGTTGATGGTC
CGGGCACACGACAGTAATGCGGCCTCTCAAAGCATCGAGCTGCTCACCAA
CGCGAAGAAATCAAGCTATACACTGGACTTCATACCCTCAGCAAAGACAA
GGGATCAGATCTGTAACAGCATGCACGCGCTACAGTCTCTCCTGCACATC
GTCCAGGTGCTGGTCAGCTACGGGCTGATGTTGGTCTTCATGACGTTTAA
CGTGTGGCTGTGTCTGTCCGTGGCGCTCGGGGCAGGGGTCGGGTACTTCG
CCTTCGGCTGGCGCAAGTCCACCACCATAGACCGGAACGAACATTGTCAT
TGAATGACGATGGCACGATATATCATCCCGCTGGTTGTGGTCCTAGTCAT
CTGCCAAACTACATGTACCTATGGGGCCACGGAGACAGCAAGTACCATGA
CGAACACTACAGGTGGAGGCGATTCAGGTCATGGCGACGGGGGACACAAG
ATGTACTTCTTCTTCGGTCACACCGGAATCACCGTCCTGTTCTACGAGTG
GAAAATAGACTCAGTAGCTGCTCTAATTGGCTCCTGTATCGGAGTGTTCG
CCATCGCCGTGTTGTACGAAGGCTTCAGGGTTTGGCGGGAAATGTTGATG
GTCCGGGCACACGACAGTAATGCGGCCTCTCAAAGCATCGAGCTGCTCAC
CAACGCGAAGAAATCAAGCTATACACTGGACTTCATACCCTCAGCAAAGA
CAAGGGATCAGATCTGTAACAGCATGCACGCGCTACAGTCTCTCCTGCAC
ATCGTCCAGGTGCTGGTCAGCTACGGGCTGATGTTGGTCTTCATGACGTT
TAACGTGTGGCTGTGTCTGTCCGTGGCGCTCGGGGCAGGGGTCGGGTACT
TCGCCTTCGGCTGGCGCAAGTCCACCACCATAGACCGGAACGAACATTGT
CATTGAATGACGATGGCACGATATATCATCCCGCTGGTTGTGGTCCTAGT
CATCTGCCAAACTACATGTACCTATGGGGCCACGGAGACAGCAAGTACCA
TGACGAACACTACAGGTGGAGGCGATTCAGGTCATGGCGACGGGGGACAC
AAGATGTACTTCTTCTTCGGTCACACCGGAATCACCGTCCTGTTCTACGA
GTGGAAAATAGACTCAGTAGCTGCTCTAATTGGCTCCTGTATCGGAGTGT
TCGCCATCGCCGTGTTGTACGAAGGCTTCAGGGTTTGGCGGGAAATGTTG
ATGGTCCGGGCACACGACAGTAATGCGGCCTCTCAAAGCATCGAGCTGCT
CACCAACGCGAAGAAATCAAGCTATACACTGGACTTCATACCCTCAGCAA
AGACAAGGGATCAGATCTGTAACAGCATGCACGCGCTACAGTCTCTCCTG
CACATCGTCCAGGTGCTGGTCAGCTACGGGCTGATGTTGGTCTTCATGAC
GTTTAACGTGTGGCTGTGTCTGTCCGTGGCGCTCGGGGCAGGGGTCGGGT
ACTTCGCCTTCGGCTGGCGCAAGTCCACCACCATAGACCGGAACGAACAT
TGTCATTGAATGACGATGGCACGATATATCATCCCGCTGGTTGTGGTCCT
AGTCATCTGCCAAACTACATGTACCTATGGGGCCACGGAGACAGCAAGTA
CCATGACGAACACTACAGGTGGAGGCGATTCAGGTCATGGCGACGGGGGA
CACAAGATGTACTTCTTCTTCGGTCACACCGGAATCACCGTCCTGTTCTA
CGAGTGGAAAATAGACTCAGTAGCTGCTCTAATTGGCTCCTGTATCGGAG
TGTTCGCCATCGCCGTGTTGTACGAAGGCTTCAGGGTTTGGCGGGAAATG
TTGATGGTCCGGGCACACGACAGTAATGCGGCCTCTCAAAGCATCGAGCT
GCTCACCAACGCGAAGAAATCAAGCTATACACTGGACTTCATACCCTCAG
CAAAGACAAGGGATCAGATCTGTAACAGCATGCACGCGCTACAGTCTCTC
CTGCACATCGTCCAGGTGCTGGTCAGCTACGGGCTGATGTTGGTCTTCAT
GACGTTTAACGTGTGGCTGTGTCTGTCCGTGGCGCTCGGGGCAGGGGTCG
GGTACTTCGCCTTCGGCTGGCGCAAGTCCACCACCATAGACCGGAACGAA
CATTGTCATTGAATGACGATGGCACGATATATCATCCCGCTGGTTGTGGT
CCTAGTCATCTGCCAAACTACATGTACCTATGGGGCCACGGAGACAGCAA
GTACCATGACGAACACTACAGGTGGAGGCGATTCAGGTCATGGCGACGGG
GGACACAAGATGTACTTCTTCTTCGGTCACACCGGAATCACCGTCCTGTT
CTACGAGTGGAAAATAGACTCAGTAGCTGCTCTAATTGGCTCCTGTATCG
GAGTGTTCGCCATCGCCGTGTTGTACGAAGGCTTCAGGGTTTGGCGGGAA
ATGTTGATGGTCCGGGCACACGACAGTAATGCGGCCTCTCAAAGCATCGA
GCTGCTCACCAACGCGAAGAAATCAAGCTATACACTGGACTTCATACCCT
CAGCAAAGACAAGGGATCAGATCTGTAACAGCATGCACGCGCTACAGTCT
CTCCTGCACATCGTCCAGGTGCTGGTCAGCTACGGGCTGATGTTGGTCTT
CATGACGTTTAACGTGTGGCTGTGTCTGTCCGTGGCGCTCGGGGCAGGGG
TCGGGTACTTCGCCTTCGGCTGGCGCAAGTCCACCACCATAGACCGGAAC
GAACATTGTCATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000135 | genome | Sc0000135:172636..174339 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95812_evm1 |
| Biotype | protein_coding |
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