|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95733_evm0 >transcript:BL95733_evm0-protein ID=transcript:BL95733_evm0-protein|Name=transcript:BL95733_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=553bp
MLGLVLVGLFDILSNYESNKCEMTYMYEYPEYLPVPLSDNVTMSFPRYNL
YLYAEGRYARQSANFKLTGVPVLFIPGNAGSHKQVRSLGSVALKKAQHLR
TTFHFNYFAVDLNEELTGMFGAILSEQTEFVHRCILKILSMYRKAEAPPK
SVILVGHSVGGIIARGLFTLPDFDPSMVNTIITQATPHQSPVVNADQYMA
DFYNTVNQFWQDGMSSGRLSHVTIASTGGAHRDYLVRAGLTSLKGIIPET
NAVSAVTSAIPKVWLSTDHLAIVWCKQLVLATKRALFDIIDPKTRQVTTD
VKHRMQVFRHHFLHHPGSKSFSLTSVQSAIPPGDNYQGARLMYLSLNIPL
PDSEVMKAQGTWFNAMPILFYFFASAICTMVSAALFGGVTMIGHCMVWFG
KKPADPEEMARKAPHPAALFVISGAFLAVASQFSGALAFALVLALYFGKT
CRLYANTITLKNCLNLQNDKKKPGPLADAEDTFHLQYTILYLIWFMSMLY
MPSVVFWGKNLNFEYRLPADPALYTAAAMSACFAFLYPLQGCNLRKRRSV
TYL Run BLAST on NCBI mRNA from alignment at Sc0000104:395372..398388+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95733_evm0 ID=transcript:BL95733_evm0|Name=transcript:BL95733_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3017bp|location=Sequence derived from alignment at Sc0000104:395372..398388+ (Branchiostoma lanceolatum)
ATGCTGGGCTTAGTCCTGGTAGGCCTGTTTGACATCCTGTCCAACTACGA
GAGCAACAAATGTGAGATGACCTACATGTACGAGTATCCAGAGTACCTCC
CCGTCCCTCTGAGCGATAATGTCACCATGTCGTTCCCGCGGTACAACCTA
TACCTGTACGCCGAGGGGAGGTATGCAAGGCAATCAGCGAACTTCAAGCT
GACAGGAGTTCCTGTGTTGTTCATCCCGGGCAACGCCGGTAGCCACAAGC
AGGTCAGGTCGCTCGGTTCGGTGGCGCTGAAGAAAGCGCAGCACCTCCGC
ACTACGTTCCACTTCAACTACTTTGCCGTGGATCTGAACGAGGAATTGAC
GGGAATGTTCGGGGCCATACTGTCGGAGCAGACAGAGTTTGTCCATCGAT
GTATCTTGAAGATCCTCTCAATGTACAGGAAGGCAGAAGCCCCGCCTAAA
AGTGTGATTCTAGTCGGTCACTCCGTGGGAGGCATCATAGCCAGGGGTCT
TTTCACCCTGCCTGACTTTGACCCCTCTATGGTCAATACCATCATCACTC
AAGCTACCCCCCACCAAAGCCCTGTCGTCAATGCAGATCAGTATATGGCA
GACTTTTACAACACAGTCAACCAGTTTTGGCAGGATGGAATGAGCAGTGG
ACGGCTTTCACACGTTACCATAGCCTCCACAGGAGGGGCTCACAGAGACT
ACCTTGTTCGGGCAGGGCTGACCTCTCTGAAAGGGATCATCCCAGAAACC
AACGCTGTCAGTGCTGTGACATCGGCAATACCAAAAGTGTGGCTGTCTAC
CGACCATCTGGCAATAGTATGGTGTAAACAGTTGGTGCTAGCCACCAAAA
GAGCGCTTTTTGACATCATCGACCCAAAGACAAGGCAGGTCACAACGGAC
GTGAAACACAGGATGCAGGTGTTTCGCCATCATTTTCTCCACCACCCTGG
AAGCAAGTCCTTCTCCTTAACATCAGTACAAAGTGCAATCCCTCCTGGTG
ATAAGTGGGTCGAGCTTACAGATGAGATATGGGAACTTACAGAGCCTAGA
AACAAGGATGTAACAAACTATATGTTCCCCATTGACAAAGAGTCGGGTAG
AGATACCTTTGTAGCAGCTACCAATATTGTAGAAGATAGCTGGGTGTACT
TGTGTCAAGAAGAGGGGGGGCAGAGGTGTAAAGAGGGGCTTGATATGTCC
TCTCGGTCTCAGCTCAGCCCTCCTCTTTACTCAGGTCACAAAGTTGTTCA
CCTACATCTGGCCAGCTACAGAAGTTTTTCTCACGTTGTTGTATCTGTAC
CCAAGTCATCAAAGCCAGTGAAGTTGCAAACACAGTTCTACAATGGTACA
GAGAAAGCTCAGGAATTGGAAGTCCCCCACGTCATGTCTTTTACCATACA
AAAGGTGGTTGAGGTTGAAGTTCCTAACAACACAATGTTTTACAACATCA
GTGTCGTAGGTTTACAAGAAGTCTATCATGCCTTCACAGCCAACTTGATA
AGTGATTGTGAAGACAATGACATGACAAAGATGCACATGCACATTCCATG
GTTCAAGGAGGACGTTTATAGCGTCTCCCAGGCAAGTGGAGATGGTAAAC
TTTCGATGCGTTTGCAAAGTGGAAAACTTGTGGATGAGAGCACCAATCCA
GAGCTTCGCCTCTACCTGAATCCAAAATGTAACTACAAAGTCCAAGTTTG
GGTCAACTTTGTGGAAGTCTTAGGTCAGTTGATAAGATTCCATGGCATTG
NTAAGATTCCATGGTATTGTTTTACCTGCATTTGCAGTGACCATCATACT
GATGGTACTGTCCTACCAGATTAGGACACTTGGTCGTGGACAACCTTGTC
CTTCATTTTCTGAAGCGCAGACAGCCTTCTGTAAACCATACAGAGTTGCC
CCTTTGGTCAACCTCTTCTCCTTGTTGATTAGCTACCAAGGTGCACGTCT
GATGTACCTGTCTCTCAACATCCCCCTCCCAGACTCGGAAGTCATGAAGG
CTCAGGGAACATGGTTTAATGCCATGCCGATCCTTTTCTACTTCTTTGCC
AGCGCCATCTGCACAATGGTGTCAGCTGCGCTGTTCGGGGGAGTGACTAT
GATAGGTCACTGCATGGTCTGGTTTGGGAAGAAACCCGCCGATCCTGAAG
AGATGGCGAGGAAAGCTCCCCATCCAGCGGCACTGTTTGTCATCTCTGGC
GCCTTTCTGGCCGTAGCTAGCCAGTTTTCAGGAGCACTTGCCTTCGCTCT
CGTTCTAGCACTTTACTTCGGTAAGACATGCCGGTTGTATGCCAACACCA
TCACCCTGAAGAACTGTTTGAACCTGCAGAACGACAAGAAAAAGCCCGGC
CCTCTCGCCGATGCTGAAGACACCTTCCACCTCCAGTACACAATTCTGTA
CTTGATCTGGTTCATGTCGATGCTCTACATGCCTTCTGTCGTTTTCTGGG
GAAAGAACTTGAACTTCGAGTACAGGCTACCGGCGGACCCCGCCCTGTAC
ACTGCAGCTGCCATGAGTGCGTGTTTTGCTTTCTTGTATCCTCTGCAGGG
ATGTAACCTCAGGAAGAGGCGCAGTGTTGTTTGGTTATCCTGGTTTGTGT
ACATCAGTGCGATATTGGCTTGTATGTTCTGCATGGTTGCCCTGTATAGG
ACACCATACTTCATACTTGGGGCTTTTGTAGTGGTTGCTTTCTGTCACAG
AATGGTGTAATGGAAGCATCATGAAGCATGCTTCATATCCATATCTGGCC
ATAAGATGTGCCATATTTGATAAATGAATGTTACACATGTATGTAAAGGA
TTCGATTTATAATCAAGAGCTTTATGCTTAGGTATGTGAAATAGCACAGT
CGGATAATCCTAATATTGTCTCAGTCCGATTATGAATGCTATCTTTTTAG
CAGAAGGGGAACACTTTGACAAGATGTAATTTTCATGAATATAAGACAGT
CTATCTGTGTTAGAACTTATACTTTGATACATTGATTTTTGTTTTATTAC
TCCAGACTTACCTATAA Coding sequence (CDS) from alignment at Sc0000104:395372..398388+ >transcript:BL95733_evm0 ID=transcript:BL95733_evm0|Name=transcript:BL95733_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=4986bp|location=Sequence derived from alignment at Sc0000104:395372..398388+ (Branchiostoma lanceolatum)
ATGCTGGGCTTAGTCCTGGTAGGCCTGTTTGACATCCTGTCCAACTACGA
GAGCAACAAATGTGAGATGACCTACATGTACGAGTATCCAGAGTACCTCC
CCGTCCCTCTGAGCGATAATGTCACCATGTCGTTCCCGCGGTACAACCTA
TACCTGTACGCCGAGGGGAGGTATGCAAGGCAATCAGCGAACTTCAAGCT
GACAGGAGTTCCTGTGTTGTTCATCCCGGGCAACGCCGGTAGCCACAAGC
AGGTCAGGTCGCTCGGTTCGGTGGCGCTGAAGAAAGCGCAGCACCTCCGC
ACTACGTTCCACTTCAACTACTTTGCCGTGGATCTGAACGAGGAATTGAC
GGGAATGTTCGGGGCCATACTGTCGGAGCAGACAGAGTTTGTCCATCGAT
GTATCTTGAAGATCCTCTCAATGTACAGGAAGGCAGAAGCCCCGCCTAAA
AGTGTGATTCTAGTCGGTCACTCCGTGGGAGGCATCATAGCCAGGGGTCT
TTTCACCCTGCCTGACTTTGACCCCTCTATGGTCAATACCATCATCACTC
AAGCTACCCCCCACCAAAGCCCTGTCGTCAATGCAGATCAGTATATGGCA
GACTTTTACAACACAGTCAACCAGTTTTGGCAGGATGGAATGAGCAGTGG
ACGGCTTTCACACGTTACCATAGCCTCCACAGGAGGGGCTCACAGAGACT
ACCTTGTTCGGGCAGGGCTGACCTCTCTGAAAGGGATCATCCCAGAAACC
AACGCTGTCAGTGCTGTGACATCGGCAATACCAAAAGTGTGGCTGTCTAC
CGACCATCTGGCAATAGTATGGTGTAAACAGTTGGTGCTAGCCACCAAAA
GAGCGCTTTTTGACATCATCGACCCAAAGACAAGGCAGGTCACAACGGAC
GTGAAACACAGGATGCAGGTGTTTCGCCATCATTTTCTCCACCACCCTGG
AAGCAAGTCCTTCTCCTTAACATCAGTACAAAGTGCAATCCCTCCTGGTG
ATAACTACCAAGGTGCACGTCTGATGTACCTGTCTCTCAACATCCCCCTC
CCAGACTCGGAAGTCATGAAGGCTCAGGGAACATGGTTTAATGCCATGCC
GATCCTTTTCTACTTCTTTGCCAGCGCCATCTGCACAATGGTGTCAGCTG
CGCTGTTCGGGGGAGTGACTATGATAGGTCACTGCATGGTCTGGTTTGGG
AAGAAACCCGCCGATCCTGAAGAGATGGCGAGGAAAGCTCCCCATCCAGC
GGCACTGTTTGTCATCTCTGGCGCCTTTCTGGCCGTAGCTAGCCAGTTTT
CAGGAGCACTTGCCTTCGCTCTCGTTCTAGCACTTTACTTCGGTAAGACA
TGCCGGTTGTATGCCAACACCATCACCCTGAAGAACTGTTTGAACCTGCA
GAACGACAAGAAAAAGCCCGGCCCTCTCGCCGATGCTGAAGACACCTTCC
ACCTCCAGTACACAATTCTGTACTTGATCTGGTTCATGTCGATGCTCTAC
ATGCCTTCTGTCGTTTTCTGGGGAAAGAACTTGAACTTCGAGTACAGGCT
ACCGGCGGACCCCGCCCTGTACACTGCAGCTGCCATGAGTGCGTGTTTTG
CTTTCTTGTATCCTCTGCAGGGATGTAACCTCAGGAAGAGGCGCAGTGTT
ACTTACCTATAAATGCTGGGCTTAGTCCTGGTAGGCCTGTTTGACATCCT
GTCCAACTACGAGAGCAACAAATGTGAGATGACCTACATGTACGAGTATC
CAGAGTACCTCCCCGTCCCTCTGAGCGATAATGTCACCATGTCGTTCCCG
CGGTACAACCTATACCTGTACGCCGAGGGGAGGTATGCAAGGCAATCAGC
GAACTTCAAGCTGACAGGAGTTCCTGTGTTGTTCATCCCGGGCAACGCCG
GTAGCCACAAGCAGGTCAGGTCGCTCGGTTCGGTGGCGCTGAAGAAAGCG
CAGCACCTCCGCACTACGTTCCACTTCAACTACTTTGCCGTGGATCTGAA
CGAGGAATTGACGGGAATGTTCGGGGCCATACTGTCGGAGCAGACAGAGT
TTGTCCATCGATGTATCTTGAAGATCCTCTCAATGTACAGGAAGGCAGAA
GCCCCGCCTAAAAGTGTGATTCTAGTCGGTCACTCCGTGGGAGGCATCAT
AGCCAGGGGTCTTTTCACCCTGCCTGACTTTGACCCCTCTATGGTCAATA
CCATCATCACTCAAGCTACCCCCCACCAAAGCCCTGTCGTCAATGCAGAT
CAGTATATGGCAGACTTTTACAACACAGTCAACCAGTTTTGGCAGGATGG
AATGAGCAGTGGACGGCTTTCACACGTTACCATAGCCTCCACAGGAGGGG
CTCACAGAGACTACCTTGTTCGGGCAGGGCTGACCTCTCTGAAAGGGATC
ATCCCAGAAACCAACGCTGTCAGTGCTGTGACATCGGCAATACCAAAAGT
GTGGCTGTCTACCGACCATCTGGCAATAGTATGGTGTAAACAGTTGGTGC
TAGCCACCAAAAGAGCGCTTTTTGACATCATCGACCCAAAGACAAGGCAG
GTCACAACGGACGTGAAACACAGGATGCAGGTGTTTCGCCATCATTTTCT
CCACCACCCTGGAAGCAAGTCCTTCTCCTTAACATCAGTACAAAGTGCAA
TCCCTCCTGGTGATAACTACCAAGGTGCACGTCTGATGTACCTGTCTCTC
AACATCCCCCTCCCAGACTCGGAAGTCATGAAGGCTCAGGGAACATGGTT
TAATGCCATGCCGATCCTTTTCTACTTCTTTGCCAGCGCCATCTGCACAA
TGGTGTCAGCTGCGCTGTTCGGGGGAGTGACTATGATAGGTCACTGCATG
GTCTGGTTTGGGAAGAAACCCGCCGATCCTGAAGAGATGGCGAGGAAAGC
TCCCCATCCAGCGGCACTGTTTGTCATCTCTGGCGCCTTTCTGGCCGTAG
CTAGCCAGTTTTCAGGAGCACTTGCCTTCGCTCTCGTTCTAGCACTTTAC
TTCGGTAAGACATGCCGGTTGTATGCCAACACCATCACCCTGAAGAACTG
TTTGAACCTGCAGAACGACAAGAAAAAGCCCGGCCCTCTCGCCGATGCTG
AAGACACCTTCCACCTCCAGTACACAATTCTGTACTTGATCTGGTTCATG
TCGATGCTCTACATGCCTTCTGTCGTTTTCTGGGGAAAGAACTTGAACTT
CGAGTACAGGCTACCGGCGGACCCCGCCCTGTACACTGCAGCTGCCATGA
GTGCGTGTTTTGCTTTCTTGTATCCTCTGCAGGGATGTAACCTCAGGAAG
AGGCGCAGTGTTACTTACCTATAAATGCTGGGCTTAGTCCTGGTAGGCCT
GTTTGACATCCTGTCCAACTACGAGAGCAACAAATGTGAGATGACCTACA
TGTACGAGTATCCAGAGTACCTCCCCGTCCCTCTGAGCGATAATGTCACC
ATGTCGTTCCCGCGGTACAACCTATACCTGTACGCCGAGGGGAGGTATGC
AAGGCAATCAGCGAACTTCAAGCTGACAGGAGTTCCTGTGTTGTTCATCC
CGGGCAACGCCGGTAGCCACAAGCAGGTCAGGTCGCTCGGTTCGGTGGCG
CTGAAGAAAGCGCAGCACCTCCGCACTACGTTCCACTTCAACTACTTTGC
CGTGGATCTGAACGAGGAATTGACGGGAATGTTCGGGGCCATACTGTCGG
AGCAGACAGAGTTTGTCCATCGATGTATCTTGAAGATCCTCTCAATGTAC
AGGAAGGCAGAAGCCCCGCCTAAAAGTGTGATTCTAGTCGGTCACTCCGT
GGGAGGCATCATAGCCAGGGGTCTTTTCACCCTGCCTGACTTTGACCCCT
CTATGGTCAATACCATCATCACTCAAGCTACCCCCCACCAAAGCCCTGTC
GTCAATGCAGATCAGTATATGGCAGACTTTTACAACACAGTCAACCAGTT
TTGGCAGGATGGAATGAGCAGTGGACGGCTTTCACACGTTACCATAGCCT
CCACAGGAGGGGCTCACAGAGACTACCTTGTTCGGGCAGGGCTGACCTCT
CTGAAAGGGATCATCCCAGAAACCAACGCTGTCAGTGCTGTGACATCGGC
AATACCAAAAGTGTGGCTGTCTACCGACCATCTGGCAATAGTATGGTGTA
AACAGTTGGTGCTAGCCACCAAAAGAGCGCTTTTTGACATCATCGACCCA
AAGACAAGGCAGGTCACAACGGACGTGAAACACAGGATGCAGGTGTTTCG
CCATCATTTTCTCCACCACCCTGGAAGCAAGTCCTTCTCCTTAACATCAG
TACAAAGTGCAATCCCTCCTGGTGATAACTACCAAGGTGCACGTCTGATG
TACCTGTCTCTCAACATCCCCCTCCCAGACTCGGAAGTCATGAAGGCTCA
GGGAACATGGTTTAATGCCATGCCGATCCTTTTCTACTTCTTTGCCAGCG
CCATCTGCACAATGGTGTCAGCTGCGCTGTTCGGGGGAGTGACTATGATA
GGTCACTGCATGGTCTGGTTTGGGAAGAAACCCGCCGATCCTGAAGAGAT
GGCGAGGAAAGCTCCCCATCCAGCGGCACTGTTTGTCATCTCTGGCGCCT
TTCTGGCCGTAGCTAGCCAGTTTTCAGGAGCACTTGCCTTCGCTCTCGTT
CTAGCACTTTACTTCGGTAAGACATGCCGGTTGTATGCCAACACCATCAC
CCTGAAGAACTGTTTGAACCTGCAGAACGACAAGAAAAAGCCCGGCCCTC
TCGCCGATGCTGAAGACACCTTCCACCTCCAGTACACAATTCTGTACTTG
ATCTGGTTCATGTCGATGCTCTACATGCCTTCTGTCGTTTTCTGGGGAAA
GAACTTGAACTTCGAGTACAGGCTACCGGCGGACCCCGCCCTGTACACTG
CAGCTGCCATGAGTGCGTGTTTTGCTTTCTTGTATCCTCTGCAGGGATGT
AACCTCAGGAAGAGGCGCAGTGTTACTTACCTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000104 | genome | Sc0000104:395372..398388 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95733_evm0 |
| Biotype | protein_coding |
|
