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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95721_evm1 >transcript:BL95721_evm1-protein ID=transcript:BL95721_evm1-protein|Name=transcript:BL95721_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=347bp
MNTCVPVCGWIDPESLESLGKTLKHEHLVADFSCFRSKPSQHAPHLDTVS FTMENLGFIRQYPYNFLENLSLHGEENHMVEELEFFKQNGGSSIVECTTL GLSRDVGKLKKISMETGVNVICGTGYYTASTHPPSMDNLTQEQLVSIMVH DITQGADGTDVRCGVIGEVGCSWPLTDNERKVLKATATAQSETGCPVIIH PGRHTDAPSEIIRVLQEAGGDVGATVMSHIDRTFFEPEDVLEFASLGSYL EWDFFGLEVSHCQWADIDMPNDAMRIKMIRRVLEEGHADKVVISHDVDTK HRLMHYGGHGYSHILLNVVPMMMNRGISEEDINKILVENPKQWLVFK Run BLAST on NCBI mRNA from alignment at Sc0000100:680512..683758- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95721_evm1 ID=transcript:BL95721_evm1|Name=transcript:BL95721_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3247bp|location=Sequence derived from alignment at Sc0000100:680512..683758- (Branchiostoma lanceolatum) ATGAACACTTGTGTTCCAGTGTGTGGCTGGATTGACCCAGAAAGCCTGGG
TAAGACCCTGATACATGAACACTTGTGTTCCAGTGTGTGGTTGGATTGAC
CCAGAAAGCTCGTGTATGACCCTGACACATGAACACTTGTGTTCCAGTGT
GTGGCTGGATTGACCCAGAAAGCCTGGGTAAGACCCTGATACATGAACAC
TTGTGTTCCAGTGTGTGGTTGGATTGACCCAGAAAGCCTGGGTAAAACCC
TGAAACATGAACACCTGGTGGCTGACTTCTCCTGCTTCCGGTCCAAGCCA
TCCCAGCATGCTCCTCACCTGGATACCGTGTCCTTTACAATGGAGAATCT
GGGATTCATCAGACAATATCCGTAGGTGTTTTTAAATAAACCTGGAAGGA
TTCCGAGTGAGGGGTGTGGTTAGAGATTGCAATTATATTTTGCACGAGAC
ACGAGCAAGGAAATAACTTAATAGCAAAGCGAAATTATAAAGTCTGCAAT
CGCATGTCATTCCTTGTTGGTCCGTTATTTGGACTAAACAGATTGGCCAT
TATATTAAAATTGGCAGTTTTGTACGTAATATCAACATGGCATGTACTAG
TTAGCTGTATAGCAATTCCTGTCTAGGCTCAGGGTACCATGGATCCTTTT
TACTTGGCTTTGTCCGCTCTCTCGGTCGCTCCGTACTACGGGAGCCACCG
AGAGGGCGGATTTAAGTCGCAAGGATGGCACCCAGGCTAATTGCTGTCTA
TCTTTTAAAATTTTAACTCTTCTACCCAAGGTACAACTTCTTAGAAAACC
TTAGTCTTCATGGGGAGGAGAATCACATGGTGGAAGAGCTGGAATTCTTC
AAACAGAATGGAGGCTCTTCCATCGTTGAATGCACCACCCTCGGGCTGAG
CAGAGATGTTGGAAAACTGAAGAAAATCTCCATGGAAACAGGAGTGAATG
TCATCTGCGGCACAGGTTGGAAATATTGTTGACAACAAGACACAATTTTT
TTTCAATCCCATTTCATGGAACGAGTAAAAATGTTACAGAGGCAATCAAT
TAGTACATAAATACATCCTAACAGTTGATATGTTCTTATTCAGGCTACTA
CACGGCAAGCACCCATCCCCCCAGCATGGACAACCTCACACAGGAGCAGC
TGGTGTCTATCATGGTCCACGACATCACCCAGGGGGCTGATGGGACTGAC
GTCAGGTGCGGGGTGATTGGGGAGGTCGGCTGTTCTTGGCCACTAACAGG
TGAGACACAACTTTCACAGAGGTGAGGAGTTCGCAAACAGCCAAAAGTGA
CAACTTTGCAATTGGCGTTCTCAAAGAAAGAAACACATATGTTAGAATGA
ATTTGAATCCGTAGGAAGCCACAAGGGGGCCCGAAACATGTACCGTTCCC
TCGCACGGCCTTAAATAGTCTTTCTCAAAGTTTCTTGTCTACCTCACTGT
TTTGTTATTCTAGACAATGAAAGAAAAGTTCTCAAGGCCACGGCCACAGC
ACAGAGTGAGACAGGTTGTCCTGTCATCATCCATCCTGGAAGGCACACAG
ACGCCCCCTCTGAGATCATTCGTGTATTGCAGGAAGCAGGTGGTGACGTC
GGCGCAACGGTGATGTCCCATATTGACCGTAAGTTTTGTTTTGCTACATG
TCTTTGCTACAGCTTGGGGACTTACAACCCCAGGACGGACGCATTTTGTG
AAAGAATAACCTGGGCGACCGTAACTTTACATCCCTCGATCCTTTAGAGG
GAGGAAATGAGAACTTCTTATATTAGCTAATTGTAAACAATTCCTAATGC
TGTGACACTCTGAATTGGAACAGGTCGGTGCTTATGGCTTTGTGCATCTA
TTTTCTATTAAAGATGATCTTTCCCCAATCACAGGTACGTTTTTCGAGCC
GGAGGACGTTCTAGAGTTTGCCTCGCTGGGCAGCTACCTAGAGTGGGATT
TCTTCGGACTGGAGGTTTCCCACTGCCAGTGGGCGGACATAGACATGCCG
AACGACGCCATGAGGATCAAGATGATCCGCCGGGTGCTGGAGGAGGGACA
TGCTGACAAAGTCGTCATCTCTCATGACGTGGACACCAAACATCGGCTGG
TACGTTTGCTTTTTGTCTCCAGCACACCTTTATACTGCTATAGGTGATTA
TCCAACAAAGGAATTATCTATGAATTGATCCCTGTTACCAATTCGTTTTG
GTTAAATCTATTCAAACAAGAGTTTGGAGACTTGAACTGTCCATGAAATA
TATTATACAAATTAGGCCCACATTTGCATAATTTATATTCAACTATGTTC
ACTGTCACATAACTTCCAAATGCCACAAGTATGACATGCCAGTTATCTAC
CAATATGGAATTACAGTATTTTCTCATCACTTCATTTACATAAGTTTTAT
CTATCAATGAACCTTTATTTCTCAGTTACAACATATGTTGCATTTTTTAA
CTGTCGTACCATTGAACGGAGTGGGTTTATAAAATGCCCCCCTTAATCAT
GCAAATTAGATTCTGATTTGCATTATCACCATTTCAAGTAACACTTAAGC
TATTTACATAATAGAAACAAGAATACAGGTTTGGTTGTATACTCCTTTGT
GGTTTGACCACCAGCCGTTGGGTCCCTGGGGAATTTTTGTCCCAGTTTCG
AAACTAACAGGTGTGATCTGCCACAACATGCCTAGATTGGAGATGTAGAT
TTTCCGAATTTGCACTTCATTGTGTACATCTCTGTCCTACCTGCAAATTA
AATAACACGGAAATCTGTCGTTTCTTTGTTCAGTTAATCTCCTTGGAAGA
TTTTTACAAAAACGCCAATGCAATTCCAGGGGTCACATACCAGGTGGCCC
AAAATCGACCTTGACCTTTGTTCTCCCAACACCTACCCACATACCAAATA
TCTTTACAATCCATCCTGACGTTCTTGAGCTATGCTGACTACAAGCATCC
GGACCTACAAACATACACTAACGCAAACACACACGCAAACACGCTCAACT
AAAAAAAAACAATATCTCCATAAAAAATCTCCATATTTCATGGAGATGAC
AACGGATGCTAATGACGTACGGAGTGACGAGAGAAATAATGAAGAGTGTT
TATTGTTTCTAGATGCACTACGGCGGCCACGGCTACTCCCACATCCTACT
CAATGTTGTACCCATGATGATGAACAGAGGAATATCTGAGGAAGACATCA
ATAAGATTCTCGTCGAGAATCCCAAACAATGGCTAGTCTTCAAGTAG Coding sequence (CDS) from alignment at Sc0000100:680512..683758- >transcript:BL95721_evm1 ID=transcript:BL95721_evm1|Name=transcript:BL95721_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=7308bp|location=Sequence derived from alignment at Sc0000100:680512..683758- (Branchiostoma lanceolatum) ATGAACACTTGTGTTCCAGTGTGTGGCTGGATTGACCCAGAAAGCCTGGA AAGCCTGGGTAAAACCCTGAAACATGAACACCTGGTGGCTGACTTCTCCT GCTTCCGGTCCAAGCCATCCCAGCATGCTCCTCACCTGGATACCGTGTCC TTTACAATGGAGAATCTGGGATTCATCAGACAATATCCGTACAACTTCTT AGAAAACCTTAGTCTTCATGGGGAGGAGAATCACATGGTGGAAGAGCTGG AATTCTTCAAACAGAATGGAGGCTCTTCCATCGTTGAATGCACCACCCTC GGGCTGAGCAGAGATGTTGGAAAACTGAAGAAAATCTCCATGGAAACAGG AGTGAATGTCATCTGCGGCACAGGCTACTACACGGCAAGCACCCATCCCC CCAGCATGGACAACCTCACACAGGAGCAGCTGGTGTCTATCATGGTCCAC GACATCACCCAGGGGGCTGATGGGACTGACGTCAGGTGCGGGGTGATTGG GGAGGTCGGCTGTTCTTGGCCACTAACAGACAATGAAAGAAAAGTTCTCA AGGCCACGGCCACAGCACAGAGTGAGACAGGTTGTCCTGTCATCATCCAT CCTGGAAGGCACACAGACGCCCCCTCTGAGATCATTCGTGTATTGCAGGA AGCAGGTGGTGACGTCGGCGCAACGGTGATGTCCCATATTGACCGTACGT TTTTCGAGCCGGAGGACGTTCTAGAGTTTGCCTCGCTGGGCAGCTACCTA GAGTGGGATTTCTTCGGACTGGAGGTTTCCCACTGCCAGTGGGCGGACAT AGACATGCCGAACGACGCCATGAGGATCAAGATGATCCGCCGGGTGCTGG AGGAGGGACATGCTGACAAAGTCGTCATCTCTCATGACGTGGACACCAAA CATCGGCTGATGCACTACGGCGGCCACGGCTACTCCCACATCCTACTCAA TGTTGTACCCATGATGATGAACAGAGGAATATCTGAGGAAGACATCAATA AGATTCTCGTCGAGAATCCCAAACAATGGCTAGTCTTCAAGTAGATGAAC ACTTGTGTTCCAGTGTGTGGCTGGATTGACCCAGAAAGCCTGGAAAGCCT GGGTAAAACCCTGAAACATGAACACCTGGTGGCTGACTTCTCCTGCTTCC GGTCCAAGCCATCCCAGCATGCTCCTCACCTGGATACCGTGTCCTTTACA ATGGAGAATCTGGGATTCATCAGACAATATCCGTACAACTTCTTAGAAAA CCTTAGTCTTCATGGGGAGGAGAATCACATGGTGGAAGAGCTGGAATTCT TCAAACAGAATGGAGGCTCTTCCATCGTTGAATGCACCACCCTCGGGCTG AGCAGAGATGTTGGAAAACTGAAGAAAATCTCCATGGAAACAGGAGTGAA TGTCATCTGCGGCACAGGCTACTACACGGCAAGCACCCATCCCCCCAGCA TGGACAACCTCACACAGGAGCAGCTGGTGTCTATCATGGTCCACGACATC ACCCAGGGGGCTGATGGGACTGACGTCAGGTGCGGGGTGATTGGGGAGGT CGGCTGTTCTTGGCCACTAACAGACAATGAAAGAAAAGTTCTCAAGGCCA CGGCCACAGCACAGAGTGAGACAGGTTGTCCTGTCATCATCCATCCTGGA AGGCACACAGACGCCCCCTCTGAGATCATTCGTGTATTGCAGGAAGCAGG TGGTGACGTCGGCGCAACGGTGATGTCCCATATTGACCGTACGTTTTTCG AGCCGGAGGACGTTCTAGAGTTTGCCTCGCTGGGCAGCTACCTAGAGTGG GATTTCTTCGGACTGGAGGTTTCCCACTGCCAGTGGGCGGACATAGACAT GCCGAACGACGCCATGAGGATCAAGATGATCCGCCGGGTGCTGGAGGAGG GACATGCTGACAAAGTCGTCATCTCTCATGACGTGGACACCAAACATCGG CTGATGCACTACGGCGGCCACGGCTACTCCCACATCCTACTCAATGTTGT ACCCATGATGATGAACAGAGGAATATCTGAGGAAGACATCAATAAGATTC TCGTCGAGAATCCCAAACAATGGCTAGTCTTCAAGTAGATGAACACTTGT GTTCCAGTGTGTGGCTGGATTGACCCAGAAAGCCTGGAAAGCCTGGGTAA AACCCTGAAACATGAACACCTGGTGGCTGACTTCTCCTGCTTCCGGTCCA AGCCATCCCAGCATGCTCCTCACCTGGATACCGTGTCCTTTACAATGGAG AATCTGGGATTCATCAGACAATATCCGTACAACTTCTTAGAAAACCTTAG TCTTCATGGGGAGGAGAATCACATGGTGGAAGAGCTGGAATTCTTCAAAC AGAATGGAGGCTCTTCCATCGTTGAATGCACCACCCTCGGGCTGAGCAGA GATGTTGGAAAACTGAAGAAAATCTCCATGGAAACAGGAGTGAATGTCAT CTGCGGCACAGGCTACTACACGGCAAGCACCCATCCCCCCAGCATGGACA ACCTCACACAGGAGCAGCTGGTGTCTATCATGGTCCACGACATCACCCAG GGGGCTGATGGGACTGACGTCAGGTGCGGGGTGATTGGGGAGGTCGGCTG TTCTTGGCCACTAACAGACAATGAAAGAAAAGTTCTCAAGGCCACGGCCA CAGCACAGAGTGAGACAGGTTGTCCTGTCATCATCCATCCTGGAAGGCAC ACAGACGCCCCCTCTGAGATCATTCGTGTATTGCAGGAAGCAGGTGGTGA CGTCGGCGCAACGGTGATGTCCCATATTGACCGTACGTTTTTCGAGCCGG AGGACGTTCTAGAGTTTGCCTCGCTGGGCAGCTACCTAGAGTGGGATTTC TTCGGACTGGAGGTTTCCCACTGCCAGTGGGCGGACATAGACATGCCGAA CGACGCCATGAGGATCAAGATGATCCGCCGGGTGCTGGAGGAGGGACATG CTGACAAAGTCGTCATCTCTCATGACGTGGACACCAAACATCGGCTGATG CACTACGGCGGCCACGGCTACTCCCACATCCTACTCAATGTTGTACCCAT GATGATGAACAGAGGAATATCTGAGGAAGACATCAATAAGATTCTCGTCG AGAATCCCAAACAATGGCTAGTCTTCAAGTAGATGAACACTTGTGTTCCA GTGTGTGGCTGGATTGACCCAGAAAGCCTGGAAAGCCTGGGTAAAACCCT GAAACATGAACACCTGGTGGCTGACTTCTCCTGCTTCCGGTCCAAGCCAT CCCAGCATGCTCCTCACCTGGATACCGTGTCCTTTACAATGGAGAATCTG GGATTCATCAGACAATATCCGTACAACTTCTTAGAAAACCTTAGTCTTCA TGGGGAGGAGAATCACATGGTGGAAGAGCTGGAATTCTTCAAACAGAATG GAGGCTCTTCCATCGTTGAATGCACCACCCTCGGGCTGAGCAGAGATGTT GGAAAACTGAAGAAAATCTCCATGGAAACAGGAGTGAATGTCATCTGCGG CACAGGCTACTACACGGCAAGCACCCATCCCCCCAGCATGGACAACCTCA CACAGGAGCAGCTGGTGTCTATCATGGTCCACGACATCACCCAGGGGGCT GATGGGACTGACGTCAGGTGCGGGGTGATTGGGGAGGTCGGCTGTTCTTG GCCACTAACAGACAATGAAAGAAAAGTTCTCAAGGCCACGGCCACAGCAC AGAGTGAGACAGGTTGTCCTGTCATCATCCATCCTGGAAGGCACACAGAC GCCCCCTCTGAGATCATTCGTGTATTGCAGGAAGCAGGTGGTGACGTCGG CGCAACGGTGATGTCCCATATTGACCGTACGTTTTTCGAGCCGGAGGACG TTCTAGAGTTTGCCTCGCTGGGCAGCTACCTAGAGTGGGATTTCTTCGGA CTGGAGGTTTCCCACTGCCAGTGGGCGGACATAGACATGCCGAACGACGC CATGAGGATCAAGATGATCCGCCGGGTGCTGGAGGAGGGACATGCTGACA AAGTCGTCATCTCTCATGACGTGGACACCAAACATCGGCTGATGCACTAC GGCGGCCACGGCTACTCCCACATCCTACTCAATGTTGTACCCATGATGAT GAACAGAGGAATATCTGAGGAAGACATCAATAAGATTCTCGTCGAGAATC CCAAACAATGGCTAGTCTTCAAGTAGATGAACACTTGTGTTCCAGTGTGT GGCTGGATTGACCCAGAAAGCCTGGAAAGCCTGGGTAAAACCCTGAAACA TGAACACCTGGTGGCTGACTTCTCCTGCTTCCGGTCCAAGCCATCCCAGC ATGCTCCTCACCTGGATACCGTGTCCTTTACAATGGAGAATCTGGGATTC ATCAGACAATATCCGTACAACTTCTTAGAAAACCTTAGTCTTCATGGGGA GGAGAATCACATGGTGGAAGAGCTGGAATTCTTCAAACAGAATGGAGGCT CTTCCATCGTTGAATGCACCACCCTCGGGCTGAGCAGAGATGTTGGAAAA CTGAAGAAAATCTCCATGGAAACAGGAGTGAATGTCATCTGCGGCACAGG CTACTACACGGCAAGCACCCATCCCCCCAGCATGGACAACCTCACACAGG AGCAGCTGGTGTCTATCATGGTCCACGACATCACCCAGGGGGCTGATGGG ACTGACGTCAGGTGCGGGGTGATTGGGGAGGTCGGCTGTTCTTGGCCACT AACAGACAATGAAAGAAAAGTTCTCAAGGCCACGGCCACAGCACAGAGTG AGACAGGTTGTCCTGTCATCATCCATCCTGGAAGGCACACAGACGCCCCC TCTGAGATCATTCGTGTATTGCAGGAAGCAGGTGGTGACGTCGGCGCAAC GGTGATGTCCCATATTGACCGTACGTTTTTCGAGCCGGAGGACGTTCTAG AGTTTGCCTCGCTGGGCAGCTACCTAGAGTGGGATTTCTTCGGACTGGAG GTTTCCCACTGCCAGTGGGCGGACATAGACATGCCGAACGACGCCATGAG GATCAAGATGATCCGCCGGGTGCTGGAGGAGGGACATGCTGACAAAGTCG TCATCTCTCATGACGTGGACACCAAACATCGGCTGATGCACTACGGCGGC CACGGCTACTCCCACATCCTACTCAATGTTGTACCCATGATGATGAACAG AGGAATATCTGAGGAAGACATCAATAAGATTCTCGTCGAGAATCCCAAAC AATGGCTAGTCTTCAAGTAGATGAACACTTGTGTTCCAGTGTGTGGCTGG ATTGACCCAGAAAGCCTGGAAAGCCTGGGTAAAACCCTGAAACATGAACA CCTGGTGGCTGACTTCTCCTGCTTCCGGTCCAAGCCATCCCAGCATGCTC CTCACCTGGATACCGTGTCCTTTACAATGGAGAATCTGGGATTCATCAGA CAATATCCGTACAACTTCTTAGAAAACCTTAGTCTTCATGGGGAGGAGAA TCACATGGTGGAAGAGCTGGAATTCTTCAAACAGAATGGAGGCTCTTCCA TCGTTGAATGCACCACCCTCGGGCTGAGCAGAGATGTTGGAAAACTGAAG AAAATCTCCATGGAAACAGGAGTGAATGTCATCTGCGGCACAGGCTACTA CACGGCAAGCACCCATCCCCCCAGCATGGACAACCTCACACAGGAGCAGC TGGTGTCTATCATGGTCCACGACATCACCCAGGGGGCTGATGGGACTGAC GTCAGGTGCGGGGTGATTGGGGAGGTCGGCTGTTCTTGGCCACTAACAGA CAATGAAAGAAAAGTTCTCAAGGCCACGGCCACAGCACAGAGTGAGACAG GTTGTCCTGTCATCATCCATCCTGGAAGGCACACAGACGCCCCCTCTGAG ATCATTCGTGTATTGCAGGAAGCAGGTGGTGACGTCGGCGCAACGGTGAT GTCCCATATTGACCGTACGTTTTTCGAGCCGGAGGACGTTCTAGAGTTTG CCTCGCTGGGCAGCTACCTAGAGTGGGATTTCTTCGGACTGGAGGTTTCC CACTGCCAGTGGGCGGACATAGACATGCCGAACGACGCCATGAGGATCAA GATGATCCGCCGGGTGCTGGAGGAGGGACATGCTGACAAAGTCGTCATCT CTCATGACGTGGACACCAAACATCGGCTGATGCACTACGGCGGCCACGGC TACTCCCACATCCTACTCAATGTTGTACCCATGATGATGAACAGAGGAAT ATCTGAGGAAGACATCAATAAGATTCTCGTCGAGAATCCCAAACAATGGC TAGTCTTCAAGTAGATGAACACTTGTGTTCCAGTGTGTGGCTGGATTGAC CCAGAAAGCCTGGAAAGCCTGGGTAAAACCCTGAAACATGAACACCTGGT GGCTGACTTCTCCTGCTTCCGGTCCAAGCCATCCCAGCATGCTCCTCACC TGGATACCGTGTCCTTTACAATGGAGAATCTGGGATTCATCAGACAATAT CCGTACAACTTCTTAGAAAACCTTAGTCTTCATGGGGAGGAGAATCACAT GGTGGAAGAGCTGGAATTCTTCAAACAGAATGGAGGCTCTTCCATCGTTG AATGCACCACCCTCGGGCTGAGCAGAGATGTTGGAAAACTGAAGAAAATC TCCATGGAAACAGGAGTGAATGTCATCTGCGGCACAGGCTACTACACGGC AAGCACCCATCCCCCCAGCATGGACAACCTCACACAGGAGCAGCTGGTGT CTATCATGGTCCACGACATCACCCAGGGGGCTGATGGGACTGACGTCAGG TGCGGGGTGATTGGGGAGGTCGGCTGTTCTTGGCCACTAACAGACAATGA AAGAAAAGTTCTCAAGGCCACGGCCACAGCACAGAGTGAGACAGGTTGTC CTGTCATCATCCATCCTGGAAGGCACACAGACGCCCCCTCTGAGATCATT CGTGTATTGCAGGAAGCAGGTGGTGACGTCGGCGCAACGGTGATGTCCCA TATTGACCGTACGTTTTTCGAGCCGGAGGACGTTCTAGAGTTTGCCTCGC TGGGCAGCTACCTAGAGTGGGATTTCTTCGGACTGGAGGTTTCCCACTGC CAGTGGGCGGACATAGACATGCCGAACGACGCCATGAGGATCAAGATGAT CCGCCGGGTGCTGGAGGAGGGACATGCTGACAAAGTCGTCATCTCTCATG ACGTGGACACCAAACATCGGCTGATGCACTACGGCGGCCACGGCTACTCC CACATCCTACTCAATGTTGTACCCATGATGATGAACAGAGGAATATCTGA GGAAGACATCAATAAGATTCTCGTCGAGAATCCCAAACAATGGCTAGTCT TCAAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| Sc0000100 | genome | Sc0000100:680512..683758 - |
Properties
| Property Name | Value |
| Transcript id | BL95721_evm1 |
| Biotype | protein_coding |
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