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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95716_evm0 >transcript:BL95716_evm0-protein ID=transcript:BL95716_evm0-protein|Name=transcript:BL95716_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=539bp
MTMALSLRDVILVFLLMLFSNLQVQGSDSKTVTKKGSKILIINQLPHSTW
LTLRLLGRTLAERGHSVTMLMPDDVYKHLISTPVQDKVKYEGAPCAPGTL
AAGRAFEGHYWEGEYKNLLTTVENYLAEGSKSCEALLLHLERQAAKGLRY
DVALSTAPDFPCGPVLARYLGIPSAIVYVPSSTLLFGSGNPFPLAYWPVM
PSGFLTEMTFKEKIQNVLYYAGARYYLGVECSAFDFIVHKYIANDTNTEE
LLYNTDLWLSVADFTVEFARPTMPNVVNIAGYNSVQPKPLPKDLEDLMES
SGDAGVILFSLGSTTAGMPERIQQVILNAFAQVPQKVIWKMAPDIDPNSV
KFPPNVKPMSWVPQDDLLAHKKMRLFVTHGGTNGVYESVNHGVPMVSLPL
AVDHHDNVARVVGRGFGVRLDIFTMTTEELLQAINHVLSTKSYQENVDRA
ARILSXSDQPIPPMDRAMWWIEHLIRHGGLPHLRTRAHKIPFYEYFLLDV
IAFFAAVLAVVLGGLVCACRLAYQKIRGKQQGQKEKKEN Run BLAST on NCBI mRNA from alignment at Sc0000100:347693..350856- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95716_evm0 ID=transcript:BL95716_evm0|Name=transcript:BL95716_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3164bp|location=Sequence derived from alignment at Sc0000100:347693..350856- (Branchiostoma lanceolatum)
ATGACCATGGCCTTGTCACTCCGTGACGTCATCCTCGTCTTCTTGTTGAT
GCTGTTCTCTAATTTGCAAGTTCAAGGATCAGACAGTAAAACCGTAACAA
AGAAAGGCTCCAAAATTCTCATCATCAACCAACTCCCTCACAGCACGTGG
CTGACCCTCCGGTTGCTGGGACGTACACTGGCCGAAAGGGGGCACTCCGT
TACAATGCTCATGCCTGACGACGTCTACAAGCACCTCATCAGCACACCTG
TACAAGATAAGGTGAAGTACGAAGGAGCTCCGTGCGCTCCGGGGACGCTG
GCAGCAGGACGTGCGTTCGAAGGTCACTACTGGGAAGGAGAGTACAAGAA
CTTGTTGACGACGGTCGAAAACTACCTGGCCGAGGGCAGCAAAAGTTGTG
AAGCGCTTCTCCTTCACTTGGAGCGACAAGCCGCCAAAGGTCTCAGGTAT
GACGTTGCGTTGTCGACCGCCCCGGACTTTCCCTGTGGGCCCGTGTTGGC
CCGTTATCTCGGCATACCGTCCGCCATTGTGTACGTCCCTTCTTCAACAC
TGCTCTTTGGCTCCGGTAACCCGTTCCCTCTAGCGTACTGGCCCGTCATG
CCCAGTGGATTCTTAACGGAGATGACCTTCAAGGAGAAAATACAGAACGT
TCTTTACTACGCAGGAGCGAGGTACTACCTCGGCGTAGAATGTTCTGCTT
TTGACTTCATCGTACACAAATATATCGCCAACGACACCAACACAGAAGAG
CTGCTGTACAACACGGACCTGTGGCTGTCTGTGGCGGACTTTACTGTAGA
GTTCGCCCGGCCGACCATGCCCAATGTCGTCAACATAGCAGGCTACAATT
CTGTTCAGCCCAAACCTCTACCAAAGGTACTTTGCGTTCGTCAATATTAC
TGCTTAAAGTGGAGAAGGATTTAAACTTCCACAAGAGAGTGGACTCATAG
AATTTTCTTCCAGTCCTAATACGGAATATTAAAGGCCTCTATTGCATGCC
TAGAAGCGACGTGTGACGTAAGTAACGTGTCAAAGGTGATTGAGAGTCGG
TATCGACCCCCGCCCCACTTCAATGAATAGCTCTGAGCCCTGAAGGAGGT
AGCTTCTTTTAGTCCAATGAAACACCGTGTCCCAGAGATTCGATTTGCTA
AATCTACGAAGCTGTCTACATCAGGGCCCTTCAAACGTTATTGAACCAGG
ACGGGGGCCGCCACCGACTTATAACCACCTTTGACCTCATTCCCGGAAGG
TCAACTGTTCCAAGCAATCGGGGCTTTTTATTTATTTATGCGTACAATTA
GTATTCAGCAGAAGACAACTTGGAACAAGGACAGGAGGCAGCAGAAGCCA
TGCCGAAAAAGAGGCAAATGTTATGCTAATGTTATGAGACCAACACAGAT
AAATTTCCATGCTAATTTACTGCCGCTAATTACAAACTTCAATCAGACAG
CACTATCGTCTGATATACTTCATGTGATCTTCCAACGATAAGAATACCCA
CTATAGACACCACTTTTGTTTTGTTCCAATTTTATCGATTATCGACTATT
GTAGGACTTAGAAGATTTGATGGAGAGTTCAGGAGACGCAGGGGTAATCC
TCTTCAGTTTGGGCTCAACCACAGCAGGCATGCCCGAGAGGATACAACAG
GTAATTTTGAACGCCTTCGCACAAGTACCACAGAAGGTTATCTGGAAGAT
GGCTCCAGACATCGATCCCAACAGCGTGAAATTCCCTCCCAACGTCAAGC
CGATGAGCTGGGTGCCACAGGACGATCTGTTGGGTACGTATACACTAGGC
CAAATTTGATTTTATACCTTATTTATACAACGTTTCGGCAACTTGTTAAC
AGCATTCATATTATTGTAACTGCTACTAAATGCCGCATGGTGGCGCTGTG
ATAAGAAGAACGCGGTCCCGTGAAACGTGACTGAGTTTGTATCCGCCCTC
GTCTCAATTCATGACTGATGTTGATTTCCTCACTCCTTTGAAACATTGTC
AGGTAAAAATCTTTTGTGATATAGAACCTTACCTTCAAATGGCCCATGAA
GCCGTTGACTAATATTTAGTCTGGCATGCAATTTTGGGATGTAACAGAAG
GGAGCATAACATAGGGACCCACTTTTTTAATGGCAAAATAAATGTACGAT
ACGCGGTATAAGATCAACAAAATCATTTGCGGCCCTCTACGTCTATTTCC
AATAGCACACAAGAAGATGAGGCTGTTCGTCACACACGGAGGGACCAACG
GCGTGTACGAGTCCGTCAACCACGGGGTACCGATGGTGTCTCTCCCGCTC
GCCGTCGACCATCACGACAACGTGGCCCGCGTGGTGGGACGAGGGTTCGG
CGTCAGACTCGACATCTTCACCATGACAACGGAGGAACTTCTACAGGCAA
TCAACCACGTGTTATCAACAAAGAGGTGAGGAAATTTAATCTCCAAGCAG
ATGTATGGTGTAGGCTTGTACGTCCTAATACGACCTTCGGGCCCCAGTAA
CATTTTATGGTCTCTGTTAATGTTATACATCAGTTACACATGATGACCAC
AAGCCTAAAACAGTTAACGCGAAGCGCGAATATATAGTAGGAGGAACACT
CTACAAAATTTGAAACCATTGTAATGGATAACCTAATGGAACATTACCAA
CCGAGACGGGGGCCGATACCGACTTCCAACTACCTTTGACCCGTTGCTCA
CGCCACATTTCCTGAAGGTCTGAGCAATTGGGTCCTCAGTAACTAGTATC
CTGGAGAAGACCAGAGGAGTGATGAGTCCACTCTTTTGTGTTGGGACAAA
GTTAAATCATTTTACGTTACGTTGTGATGAGTGGTCATACTAATGGAACC
GTCATATTCCTGTTGACAGCTACCAGGAGAACGTGGATCGCGCCGCCCGG
ATCCTGAGCGNGAGTGACCAGCCCATCCCGCCCATGGACCGCGCCATGTG
GTGGATAGAGCACCTCATCAGGCACGGCGGACTGCCTCATCTGCGCACGC
GCGCACACAAGATCCCCTTTTACGAGTATTTCCTGCTCGACGTCATAGCT
TTCTTTGCCGCAGTTCTAGCTGTGGTGTTAGGTGGGTTAGTGTGCGCTTG
TCGTCTGGCTTACCAAAAAATAAGAGGGAAACAACAAGGACAGAAGGAGA
AGAAAGAGAACTAA Coding sequence (CDS) from alignment at Sc0000100:347693..350856- >transcript:BL95716_evm0 ID=transcript:BL95716_evm0|Name=transcript:BL95716_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=6480bp|location=Sequence derived from alignment at Sc0000100:347693..350856- (Branchiostoma lanceolatum)
ATGACCATGGCCTTGTCACTCCGTGACGTCATCCTCGTCTTCTTGTTGAT
GCTGTTCTCTAATTTGCAAGTTCAAGGATCAGACAGTAAAACCGTAACAA
AGAAAGGCTCCAAAATTCTCATCATCAACCAACTCCCTCACAGCACGTGG
CTGACCCTCCGGTTGCTGGGACGTACACTGGCCGAAAGGGGGCACTCCGT
TACAATGCTCATGCCTGACGACGTCTACAAGCACCTCATCAGCACACCTG
TACAAGATAAGGTGAAGTACGAAGGAGCTCCGTGCGCTCCGGGGACGCTG
GCAGCAGGACGTGCGTTCGAAGGTCACTACTGGGAAGGAGAGTACAAGAA
CTTGTTGACGACGGTCGAAAACTACCTGGCCGAGGGCAGCAAAAGTTGTG
AAGCGCTTCTCCTTCACTTGGAGCGACAAGCCGCCAAAGGTCTCAGGTAT
GACGTTGCGTTGTCGACCGCCCCGGACTTTCCCTGTGGGCCCGTGTTGGC
CCGTTATCTCGGCATACCGTCCGCCATTGTGTACGTCCCTTCTTCAACAC
TGCTCTTTGGCTCCGGTAACCCGTTCCCTCTAGCGTACTGGCCCGTCATG
CCCAGTGGATTCTTAACGGAGATGACCTTCAAGGAGAAAATACAGAACGT
TCTTTACTACGCAGGAGCGAGGTACTACCTCGGCGTAGAATGTTCTGCTT
TTGACTTCATCGTACACAAATATATCGCCAACGACACCAACACAGAAGAG
CTGCTGTACAACACGGACCTGTGGCTGTCTGTGGCGGACTTTACTGTAGA
GTTCGCCCGGCCGACCATGCCCAATGTCGTCAACATAGCAGGCTACAATT
CTGTTCAGCCCAAACCTCTACCAAAGGACTTAGAAGATTTGATGGAGAGT
TCAGGAGACGCAGGGGTAATCCTCTTCAGTTTGGGCTCAACCACAGCAGG
CATGCCCGAGAGGATACAACAGGTAATTTTGAACGCCTTCGCACAAGTAC
CACAGAAGGTTATCTGGAAGATGGCTCCAGACATCGATCCCAACAGCGTG
AAATTCCCTCCCAACGTCAAGCCGATGAGCTGGGTGCCACAGGACGATCT
GTTGGCACACAAGAAGATGAGGCTGTTCGTCACACACGGAGGGACCAACG
GCGTGTACGAGTCCGTCAACCACGGGGTACCGATGGTGTCTCTCCCGCTC
GCCGTCGACCATCACGACAACGTGGCCCGCGTGGTGGGACGAGGGTTCGG
CGTCAGACTCGACATCTTCACCATGACAACGGAGGAACTTCTACAGGCAA
TCAACCACGTGTTATCAACAAAGAGCTACCAGGAGAACGTGGATCGCGCC
GCCCGGATCCTGAGCGNGAGTGACCAGCCCATCCCGCCCATGGACCGCGC
CATGTGGTGGATAGAGCACCTCATCAGGCACGGCGGACTGCCTCATCTGC
GCACGCGCGCACACAAGATCCCCTTTTACGAGTATTTCCTGCTCGACGTC
ATAGCTTTCTTTGCCGCAGTTCTAGCTGTGGTGTTAGGTGGGTTAGTGTG
CGCTTGTCGTCTGGCTTACCAAAAAATAAGAGGGAAACAACAAGGACAGA
AGGAGAAGAAAGAGAACTAAATGACCATGGCCTTGTCACTCCGTGACGTC
ATCCTCGTCTTCTTGTTGATGCTGTTCTCTAATTTGCAAGTTCAAGGATC
AGACAGTAAAACCGTAACAAAGAAAGGCTCCAAAATTCTCATCATCAACC
AACTCCCTCACAGCACGTGGCTGACCCTCCGGTTGCTGGGACGTACACTG
GCCGAAAGGGGGCACTCCGTTACAATGCTCATGCCTGACGACGTCTACAA
GCACCTCATCAGCACACCTGTACAAGATAAGGTGAAGTACGAAGGAGCTC
CGTGCGCTCCGGGGACGCTGGCAGCAGGACGTGCGTTCGAAGGTCACTAC
TGGGAAGGAGAGTACAAGAACTTGTTGACGACGGTCGAAAACTACCTGGC
CGAGGGCAGCAAAAGTTGTGAAGCGCTTCTCCTTCACTTGGAGCGACAAG
CCGCCAAAGGTCTCAGGTATGACGTTGCGTTGTCGACCGCCCCGGACTTT
CCCTGTGGGCCCGTGTTGGCCCGTTATCTCGGCATACCGTCCGCCATTGT
GTACGTCCCTTCTTCAACACTGCTCTTTGGCTCCGGTAACCCGTTCCCTC
TAGCGTACTGGCCCGTCATGCCCAGTGGATTCTTAACGGAGATGACCTTC
AAGGAGAAAATACAGAACGTTCTTTACTACGCAGGAGCGAGGTACTACCT
CGGCGTAGAATGTTCTGCTTTTGACTTCATCGTACACAAATATATCGCCA
ACGACACCAACACAGAAGAGCTGCTGTACAACACGGACCTGTGGCTGTCT
GTGGCGGACTTTACTGTAGAGTTCGCCCGGCCGACCATGCCCAATGTCGT
CAACATAGCAGGCTACAATTCTGTTCAGCCCAAACCTCTACCAAAGGACT
TAGAAGATTTGATGGAGAGTTCAGGAGACGCAGGGGTAATCCTCTTCAGT
TTGGGCTCAACCACAGCAGGCATGCCCGAGAGGATACAACAGGTAATTTT
GAACGCCTTCGCACAAGTACCACAGAAGGTTATCTGGAAGATGGCTCCAG
ACATCGATCCCAACAGCGTGAAATTCCCTCCCAACGTCAAGCCGATGAGC
TGGGTGCCACAGGACGATCTGTTGGCACACAAGAAGATGAGGCTGTTCGT
CACACACGGAGGGACCAACGGCGTGTACGAGTCCGTCAACCACGGGGTAC
CGATGGTGTCTCTCCCGCTCGCCGTCGACCATCACGACAACGTGGCCCGC
GTGGTGGGACGAGGGTTCGGCGTCAGACTCGACATCTTCACCATGACAAC
GGAGGAACTTCTACAGGCAATCAACCACGTGTTATCAACAAAGAGCTACC
AGGAGAACGTGGATCGCGCCGCCCGGATCCTGAGCGNGAGTGACCAGCCC
ATCCCGCCCATGGACCGCGCCATGTGGTGGATAGAGCACCTCATCAGGCA
CGGCGGACTGCCTCATCTGCGCACGCGCGCACACAAGATCCCCTTTTACG
AGTATTTCCTGCTCGACGTCATAGCTTTCTTTGCCGCAGTTCTAGCTGTG
GTGTTAGGTGGGTTAGTGTGCGCTTGTCGTCTGGCTTACCAAAAAATAAG
AGGGAAACAACAAGGACAGAAGGAGAAGAAAGAGAACTAAATGACCATGG
CCTTGTCACTCCGTGACGTCATCCTCGTCTTCTTGTTGATGCTGTTCTCT
AATTTGCAAGTTCAAGGATCAGACAGTAAAACCGTAACAAAGAAAGGCTC
CAAAATTCTCATCATCAACCAACTCCCTCACAGCACGTGGCTGACCCTCC
GGTTGCTGGGACGTACACTGGCCGAAAGGGGGCACTCCGTTACAATGCTC
ATGCCTGACGACGTCTACAAGCACCTCATCAGCACACCTGTACAAGATAA
GGTGAAGTACGAAGGAGCTCCGTGCGCTCCGGGGACGCTGGCAGCAGGAC
GTGCGTTCGAAGGTCACTACTGGGAAGGAGAGTACAAGAACTTGTTGACG
ACGGTCGAAAACTACCTGGCCGAGGGCAGCAAAAGTTGTGAAGCGCTTCT
CCTTCACTTGGAGCGACAAGCCGCCAAAGGTCTCAGGTATGACGTTGCGT
TGTCGACCGCCCCGGACTTTCCCTGTGGGCCCGTGTTGGCCCGTTATCTC
GGCATACCGTCCGCCATTGTGTACGTCCCTTCTTCAACACTGCTCTTTGG
CTCCGGTAACCCGTTCCCTCTAGCGTACTGGCCCGTCATGCCCAGTGGAT
TCTTAACGGAGATGACCTTCAAGGAGAAAATACAGAACGTTCTTTACTAC
GCAGGAGCGAGGTACTACCTCGGCGTAGAATGTTCTGCTTTTGACTTCAT
CGTACACAAATATATCGCCAACGACACCAACACAGAAGAGCTGCTGTACA
ACACGGACCTGTGGCTGTCTGTGGCGGACTTTACTGTAGAGTTCGCCCGG
CCGACCATGCCCAATGTCGTCAACATAGCAGGCTACAATTCTGTTCAGCC
CAAACCTCTACCAAAGGACTTAGAAGATTTGATGGAGAGTTCAGGAGACG
CAGGGGTAATCCTCTTCAGTTTGGGCTCAACCACAGCAGGCATGCCCGAG
AGGATACAACAGGTAATTTTGAACGCCTTCGCACAAGTACCACAGAAGGT
TATCTGGAAGATGGCTCCAGACATCGATCCCAACAGCGTGAAATTCCCTC
CCAACGTCAAGCCGATGAGCTGGGTGCCACAGGACGATCTGTTGGCACAC
AAGAAGATGAGGCTGTTCGTCACACACGGAGGGACCAACGGCGTGTACGA
GTCCGTCAACCACGGGGTACCGATGGTGTCTCTCCCGCTCGCCGTCGACC
ATCACGACAACGTGGCCCGCGTGGTGGGACGAGGGTTCGGCGTCAGACTC
GACATCTTCACCATGACAACGGAGGAACTTCTACAGGCAATCAACCACGT
GTTATCAACAAAGAGCTACCAGGAGAACGTGGATCGCGCCGCCCGGATCC
TGAGCGNGAGTGACCAGCCCATCCCGCCCATGGACCGCGCCATGTGGTGG
ATAGAGCACCTCATCAGGCACGGCGGACTGCCTCATCTGCGCACGCGCGC
ACACAAGATCCCCTTTTACGAGTATTTCCTGCTCGACGTCATAGCTTTCT
TTGCCGCAGTTCTAGCTGTGGTGTTAGGTGGGTTAGTGTGCGCTTGTCGT
CTGGCTTACCAAAAAATAAGAGGGAAACAACAAGGACAGAAGGAGAAGAA
AGAGAACTAAATGACCATGGCCTTGTCACTCCGTGACGTCATCCTCGTCT
TCTTGTTGATGCTGTTCTCTAATTTGCAAGTTCAAGGATCAGACAGTAAA
ACCGTAACAAAGAAAGGCTCCAAAATTCTCATCATCAACCAACTCCCTCA
CAGCACGTGGCTGACCCTCCGGTTGCTGGGACGTACACTGGCCGAAAGGG
GGCACTCCGTTACAATGCTCATGCCTGACGACGTCTACAAGCACCTCATC
AGCACACCTGTACAAGATAAGGTGAAGTACGAAGGAGCTCCGTGCGCTCC
GGGGACGCTGGCAGCAGGACGTGCGTTCGAAGGTCACTACTGGGAAGGAG
AGTACAAGAACTTGTTGACGACGGTCGAAAACTACCTGGCCGAGGGCAGC
AAAAGTTGTGAAGCGCTTCTCCTTCACTTGGAGCGACAAGCCGCCAAAGG
TCTCAGGTATGACGTTGCGTTGTCGACCGCCCCGGACTTTCCCTGTGGGC
CCGTGTTGGCCCGTTATCTCGGCATACCGTCCGCCATTGTGTACGTCCCT
TCTTCAACACTGCTCTTTGGCTCCGGTAACCCGTTCCCTCTAGCGTACTG
GCCCGTCATGCCCAGTGGATTCTTAACGGAGATGACCTTCAAGGAGAAAA
TACAGAACGTTCTTTACTACGCAGGAGCGAGGTACTACCTCGGCGTAGAA
TGTTCTGCTTTTGACTTCATCGTACACAAATATATCGCCAACGACACCAA
CACAGAAGAGCTGCTGTACAACACGGACCTGTGGCTGTCTGTGGCGGACT
TTACTGTAGAGTTCGCCCGGCCGACCATGCCCAATGTCGTCAACATAGCA
GGCTACAATTCTGTTCAGCCCAAACCTCTACCAAAGGACTTAGAAGATTT
GATGGAGAGTTCAGGAGACGCAGGGGTAATCCTCTTCAGTTTGGGCTCAA
CCACAGCAGGCATGCCCGAGAGGATACAACAGGTAATTTTGAACGCCTTC
GCACAAGTACCACAGAAGGTTATCTGGAAGATGGCTCCAGACATCGATCC
CAACAGCGTGAAATTCCCTCCCAACGTCAAGCCGATGAGCTGGGTGCCAC
AGGACGATCTGTTGGCACACAAGAAGATGAGGCTGTTCGTCACACACGGA
GGGACCAACGGCGTGTACGAGTCCGTCAACCACGGGGTACCGATGGTGTC
TCTCCCGCTCGCCGTCGACCATCACGACAACGTGGCCCGCGTGGTGGGAC
GAGGGTTCGGCGTCAGACTCGACATCTTCACCATGACAACGGAGGAACTT
CTACAGGCAATCAACCACGTGTTATCAACAAAGAGCTACCAGGAGAACGT
GGATCGCGCCGCCCGGATCCTGAGCGNGAGTGACCAGCCCATCCCGCCCA
TGGACCGCGCCATGTGGTGGATAGAGCACCTCATCAGGCACGGCGGACTG
CCTCATCTGCGCACGCGCGCACACAAGATCCCCTTTTACGAGTATTTCCT
GCTCGACGTCATAGCTTTCTTTGCCGCAGTTCTAGCTGTGGTGTTAGGTG
GGTTAGTGTGCGCTTGTCGTCTGGCTTACCAAAAAATAAGAGGGAAACAA
CAAGGACAGAAGGAGAAGAAAGAGAACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000100 | genome | Sc0000100:347693..350856 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95716_evm0 |
| Biotype | protein_coding |
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