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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95711_evm2 >transcript:BL95711_evm2-protein ID=transcript:BL95711_evm2-protein|Name=transcript:BL95711_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=225bp
MISPESRLLVRKHGTTTAATDTGEDLLKTLILSAASMKAATIGLLCACAL
VTLLHLQEVSGRRGRGGGLRFRSSSVRRSTGGSGSTFRARIVPPLLLASS
RRRRQGSSLSDQQCQRCTATYIYQDPSTSTFMTGTSTSPGAQEVSICRDG
TAACNKGACSINYLWSNNTITDFPDGVGGADPAVGNISVQVESVLICGTL
RHAPTLQVTVLALVVATVMRVVGGT Run BLAST on NCBI mRNA from alignment at Sc0000100:753110..755871+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95711_evm2 ID=transcript:BL95711_evm2|Name=transcript:BL95711_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2762bp|location=Sequence derived from alignment at Sc0000100:753110..755871+ (Branchiostoma lanceolatum)
ATGATTTCCCCTGAGTCGCGCTTACTGGTGCGTAAACACGGAACAACAAC
TGCAGCTACAGGTGAGGTCAAACATTTCTCAACATTCATTCACGTATGGA
TTTATCAGGGTATCCACGTAAGGCAGCTTGTTGCTGTCAGTGTTTTGCTA
GTTCCTTGCTGTCTGAAACAGGTCTTGCTAGCCCCTTATGGATTCGATAA
AGGTGTTGCTTAAGTTCCTTCCTGCCTGACACAGGCTGACAAACTCTAAG
AAAGGCGACATTATGGAGGTCGTATTAAGACACTGAAGTTTTGCGCCAAA
ACAGATACGAGATGATGATGGGAGCTTCAGAGTACTTCAGTCTTGATAAC
AACGTCTCCGGTCACATTTGAACTACGGACTTGTAGAGTCAGTTATACAT
TCTCTATACGCACTTCGCCGTGATTGGGATCATAGACCGTGGCAGTTCTT
AGAACGTCCCTGTAGAACGTAGTTGAGGGGTCACAGGTCCCACCCATTAT
GTTGTAGTCGGGTCGTCGATCTACTTGGGCCCAAGCTTAAGGACAGTCTA
TAGTGCCCTGGGCTGCTGAAGATAACATGTAGAAATCCTTGACTTGGGGT
AAGGGGTGGGTGGGTAGTGTCGACAGGAGTCACTAGGCAATTCAAATAAT
TGAAAACGTGCGCTATGAAGCTGCTCCAACTACTAGATCATTATATGATT
ATGTGGCATGACAAAGTCAAAAGCAGATTTTGTTTGAACAGCGCTAACAA
TAACAAAGGTGTCAAAATAAAAACAGACCTTTACCGGTAGTTAAGTAACC
ACTAAACTGGGCATGGTGCACGAAATCACGAACAACATTTTTTTAGAAAT
ACCATCCAGTATAAAGCACTTAGTGGCAGAAAATAAAAAGAAGCTGCGAG
ATACGGTGACGTACACGATTTGTTGTAGTAGTAACCCAGATCTACAACGA
TAACTACATTTAGTACTTGACTTGTGTGGTTTCCACGCCCCAGACACTGG
GGAAGATCTGCTGAAGACGCTGATCCTGTCTGCTGCAAGCATGAAGGCTG
CCACAATAGGACTCCTCTGCGCATGCGCGCTCGTCACTTTGCTGCACCTG
CAGGAGGTGTCCGGACGGAGGGGCCGTGGGGGAGGGCTCCGGTTCCGGAG
TTCGAGTGTCCGGAGATCTACCGGTGGATCTGGCAGCACTTTCCGTGCCA
GGATCGTCCCACCTCTGCTGCTGTAAGTGGGGATCGGATACTTTATAATT
CTTAAAAACGTTACAATTAAGAAGTTGACATTACATTTAGATGATCTTGC
TCTCAAATTATAGGAATAAAAAATGCTTCATTTATTCTTTGTATGTATGT
ATGTATGTATGTTTGTTTGTTTGTTCCTACGTCTTGTTTATTCCTTTGTC
CCTTTCATTTATTCATAGATCCATCCACTCATTCATTCTTTTTTTGTCTG
GAACGGCTCATCGCGTTCTACAGACTACAGCTCTCTCCATTGTGCCATAA
CTTTCAGACCTTTTACTTGTGATTTTCCAGTGCGTCGAGCCGGCGGCGGC
GCCAGGGCAGCAGCCTGAGTGATCAGCAGTGCCAGCGCTGCACCGCGACG
TACATCTACCAGGACCCCTCCACATCCACCTTCATGGTACGTACTGATCG
GAGTTAGTAGTCGACCTCCTGCTCGGATTTTCTGAGGTATCTTTTCATGT
AGTCGGTGTAGCACAGATCAAGTTCTTTGAATCCACCCCACTCGGCAGGC
AGGTGTGCACAGTCAACGTTTACAGGACCTAAACAATCACAGGCGAGCAA
ACCAAACTCTTTGATCAAACCGAGATCATAAACATGGCGAAACGTAAGGG
GTACAGCGACTGTCTATGTGTACCTTCTACGTCATGTTTTTATAGCCTCA
TTCCTCCATCTTCAAGGAGTCCGAAACCACACTCAACCTACACCCATTGT
GCACTTTAGTACCTCTTTTGACTGCCTTTTAAAAATCGCATGTCTTATAG
CTTACTTCATCAGTTGTAATTTATCGGCTTAAGAAATAAAGTAAAGGCAC
GAAATTGTTAAAAGTGTCTAACACTAGAGAGGTGAGAATGAGTTGTGTCT
ATACCCCCCAGACCGGGACCTCCACTTCTCCCGGGGCACAGGAGGTCAGT
ATCTGCCGCGACGGGACAGCCGCCTGCAACAAAGGCGCATGCTCCATCAA
CTACCTGTGGTCCAACAACACTATTACTGACTTTCCGGACGGGTTAGTGC
ACAGTACTATACACAATGATCCCACACTGACTGAATTGACAATTTTTACG
GCACAGTTCAAACGTGACTGTTTGATGTTTGAAAATTCAATTACTCTAAA
CCTTAAGTGGCCTTTTTTCTTCGTGTTTTTTTATTTTTATTTTTCATACA
ACTCCTGTATCTGTGCTCACTTTCGCTTGACTGTTTATGTCCATGTTGGT
GTGTGCAATTCTGCTGTAAACCTTCGATTCGATGCATTTTGGATTATCAC
TGAATAAGCACAATATAGCTTTGAAAATCTCAAATGGAAACTACATTAAT
GTATTTCTTTATCAATACAAAATACTGTCCTAAATACTCCATTTTGTTGT
TGTGCTTACAGAGTAGGGGGAGCGGACCCTGCTGTGGGCAACATATCAGT
TCAGGTGGAGTCTGTTCTCATCTGCGGCACCTTGCGACATGCTCCGACAC
TGCAGGTCACCGTACTGGCTCTTGTCGTGGCTACTGTCATGCGCGTGGTC
GGAGGAACCTGA Coding sequence (CDS) from alignment at Sc0000100:753110..755871+ >transcript:BL95711_evm2 ID=transcript:BL95711_evm2|Name=transcript:BL95711_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=3390bp|location=Sequence derived from alignment at Sc0000100:753110..755871+ (Branchiostoma lanceolatum)
ATGATTTCCCCTGAGTCGCGCTTACTGGTGCGTAAACACGGAACAACAAC
TGCAGCTACAGACACTGGGGAAGATCTGCTGAAGACGCTGATCCTGTCTG
CTGCAAGCATGAAGGCTGCCACAATAGGACTCCTCTGCGCATGCGCGCTC
GTCACTTTGCTGCACCTGCAGGAGGTGTCCGGACGGAGGGGCCGTGGGGG
AGGGCTCCGGTTCCGGAGTTCGAGTGTCCGGAGATCTACCGGTGGATCTG
GCAGCACTTTCCGTGCCAGGATCGTCCCACCTCTGCTGCTTGCGTCGAGC
CGGCGGCGGCGCCAGGGCAGCAGCCTGAGTGATCAGCAGTGCCAGCGCTG
CACCGCGACGTACATCTACCAGGACCCCTCCACATCCACCTTCATGACCG
GGACCTCCACTTCTCCCGGGGCACAGGAGGTCAGTATCTGCCGCGACGGG
ACAGCCGCCTGCAACAAAGGCGCATGCTCCATCAACTACCTGTGGTCCAA
CAACACTATTACTGACTTTCCGGACGGAGTAGGGGGAGCGGACCCTGCTG
TGGGCAACATATCAGTTCAGGTGGAGTCTGTTCTCATCTGCGGCACCTTG
CGACATGCTCCGACACTGCAGGTCACCGTACTGGCTCTTGTCGTGGCTAC
TGTCATGCGCGTGGTCGGAGGAACCTGAATGATTTCCCCTGAGTCGCGCT
TACTGGTGCGTAAACACGGAACAACAACTGCAGCTACAGACACTGGGGAA
GATCTGCTGAAGACGCTGATCCTGTCTGCTGCAAGCATGAAGGCTGCCAC
AATAGGACTCCTCTGCGCATGCGCGCTCGTCACTTTGCTGCACCTGCAGG
AGGTGTCCGGACGGAGGGGCCGTGGGGGAGGGCTCCGGTTCCGGAGTTCG
AGTGTCCGGAGATCTACCGGTGGATCTGGCAGCACTTTCCGTGCCAGGAT
CGTCCCACCTCTGCTGCTTGCGTCGAGCCGGCGGCGGCGCCAGGGCAGCA
GCCTGAGTGATCAGCAGTGCCAGCGCTGCACCGCGACGTACATCTACCAG
GACCCCTCCACATCCACCTTCATGACCGGGACCTCCACTTCTCCCGGGGC
ACAGGAGGTCAGTATCTGCCGCGACGGGACAGCCGCCTGCAACAAAGGCG
CATGCTCCATCAACTACCTGTGGTCCAACAACACTATTACTGACTTTCCG
GACGGAGTAGGGGGAGCGGACCCTGCTGTGGGCAACATATCAGTTCAGGT
GGAGTCTGTTCTCATCTGCGGCACCTTGCGACATGCTCCGACACTGCAGG
TCACCGTACTGGCTCTTGTCGTGGCTACTGTCATGCGCGTGGTCGGAGGA
ACCTGAATGATTTCCCCTGAGTCGCGCTTACTGGTGCGTAAACACGGAAC
AACAACTGCAGCTACAGACACTGGGGAAGATCTGCTGAAGACGCTGATCC
TGTCTGCTGCAAGCATGAAGGCTGCCACAATAGGACTCCTCTGCGCATGC
GCGCTCGTCACTTTGCTGCACCTGCAGGAGGTGTCCGGACGGAGGGGCCG
TGGGGGAGGGCTCCGGTTCCGGAGTTCGAGTGTCCGGAGATCTACCGGTG
GATCTGGCAGCACTTTCCGTGCCAGGATCGTCCCACCTCTGCTGCTTGCG
TCGAGCCGGCGGCGGCGCCAGGGCAGCAGCCTGAGTGATCAGCAGTGCCA
GCGCTGCACCGCGACGTACATCTACCAGGACCCCTCCACATCCACCTTCA
TGACCGGGACCTCCACTTCTCCCGGGGCACAGGAGGTCAGTATCTGCCGC
GACGGGACAGCCGCCTGCAACAAAGGCGCATGCTCCATCAACTACCTGTG
GTCCAACAACACTATTACTGACTTTCCGGACGGAGTAGGGGGAGCGGACC
CTGCTGTGGGCAACATATCAGTTCAGGTGGAGTCTGTTCTCATCTGCGGC
ACCTTGCGACATGCTCCGACACTGCAGGTCACCGTACTGGCTCTTGTCGT
GGCTACTGTCATGCGCGTGGTCGGAGGAACCTGAATGATTTCCCCTGAGT
CGCGCTTACTGGTGCGTAAACACGGAACAACAACTGCAGCTACAGACACT
GGGGAAGATCTGCTGAAGACGCTGATCCTGTCTGCTGCAAGCATGAAGGC
TGCCACAATAGGACTCCTCTGCGCATGCGCGCTCGTCACTTTGCTGCACC
TGCAGGAGGTGTCCGGACGGAGGGGCCGTGGGGGAGGGCTCCGGTTCCGG
AGTTCGAGTGTCCGGAGATCTACCGGTGGATCTGGCAGCACTTTCCGTGC
CAGGATCGTCCCACCTCTGCTGCTTGCGTCGAGCCGGCGGCGGCGCCAGG
GCAGCAGCCTGAGTGATCAGCAGTGCCAGCGCTGCACCGCGACGTACATC
TACCAGGACCCCTCCACATCCACCTTCATGACCGGGACCTCCACTTCTCC
CGGGGCACAGGAGGTCAGTATCTGCCGCGACGGGACAGCCGCCTGCAACA
AAGGCGCATGCTCCATCAACTACCTGTGGTCCAACAACACTATTACTGAC
TTTCCGGACGGAGTAGGGGGAGCGGACCCTGCTGTGGGCAACATATCAGT
TCAGGTGGAGTCTGTTCTCATCTGCGGCACCTTGCGACATGCTCCGACAC
TGCAGGTCACCGTACTGGCTCTTGTCGTGGCTACTGTCATGCGCGTGGTC
GGAGGAACCTGAATGATTTCCCCTGAGTCGCGCTTACTGGTGCGTAAACA
CGGAACAACAACTGCAGCTACAGACACTGGGGAAGATCTGCTGAAGACGC
TGATCCTGTCTGCTGCAAGCATGAAGGCTGCCACAATAGGACTCCTCTGC
GCATGCGCGCTCGTCACTTTGCTGCACCTGCAGGAGGTGTCCGGACGGAG
GGGCCGTGGGGGAGGGCTCCGGTTCCGGAGTTCGAGTGTCCGGAGATCTA
CCGGTGGATCTGGCAGCACTTTCCGTGCCAGGATCGTCCCACCTCTGCTG
CTTGCGTCGAGCCGGCGGCGGCGCCAGGGCAGCAGCCTGAGTGATCAGCA
GTGCCAGCGCTGCACCGCGACGTACATCTACCAGGACCCCTCCACATCCA
CCTTCATGACCGGGACCTCCACTTCTCCCGGGGCACAGGAGGTCAGTATC
TGCCGCGACGGGACAGCCGCCTGCAACAAAGGCGCATGCTCCATCAACTA
CCTGTGGTCCAACAACACTATTACTGACTTTCCGGACGGAGTAGGGGGAG
CGGACCCTGCTGTGGGCAACATATCAGTTCAGGTGGAGTCTGTTCTCATC
TGCGGCACCTTGCGACATGCTCCGACACTGCAGGTCACCGTACTGGCTCT
TGTCGTGGCTACTGTCATGCGCGTGGTCGGAGGAACCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000100 | genome | Sc0000100:753110..755871 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95711_evm2 |
| Biotype | protein_coding |
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