transcript:BL95678_evm1 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL95678_evm1
Unique Nametranscript:BL95678_evm1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL95678_evm1

>transcript:BL95678_evm1-protein ID=transcript:BL95678_evm1-protein|Name=transcript:BL95678_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=70bp
MYPNACDEHIITIDFSWKGKRKSFGSFFLGTSPEFELAIYTVCFLAGQGE
STRVTLGKKDAITDNVNAAG
Run BLAST on NCBI

mRNA from alignment at Sc0000094:477644..478756+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL95678_evm1 ID=transcript:BL95678_evm1|Name=transcript:BL95678_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=1113bp|location=Sequence derived from alignment at Sc0000094:477644..478756+ (Branchiostoma lanceolatum)
ATGTATGTATGTATGTATGTATGTATGTATATATGTATGTATAAATGTAT GCATGCAGGTAGGTGTGTGTGTGTCTGTATGTATACATACATCATATACA TCAGATATATGTATATTCATATACATGCTTATGAACATCATGCCTGTGCA TTTGCATGAAATGTCGACTGTCCACGAATTTATACAACATTATATAACAT TCGATTCTTTCATTTTAGCCCAACGCCTGCGACGAACATATCATCACGAT AGATTTCAGCTGGAAAGGCAAGAGGAAGTCCTTTGGTAGCTTCTTCCTCG GCACGAGCCCGGAGTTTGAGCTGGCCATCTACACCGTCTGCTTCCTGGCT GGACAAGGGGAGAGCACGAGAGTCACTCTGGGGAAGAAGGACGCCATCAC TGACAATGTGAACGGTCAATTCGGGACTTGCTATCCCAAAATAGAAGTCG AATCAGATGAGGACTCTTCAGACGACGAATCGGTTTTAAGACTTGATCCT GAGACACTAGCTAAAGGACCATGTACCTTAAAGTTCAGTTGGAGCACCCT CACTATTGATAGCTTACACGACATAAACCTGCAAATGTTAGGTGTAAAAG GTTGTTGTATTTGGTTGTAGCACGGTAGTTAAATTCATGCTCAGAAACTC CCATGTCCAGCCGATTTCGAACGCTGCTCGACGATTGATATGATATGATA TGATCGGATTGGATATGATATGATATGATCGGATTGAATCTGATATGATA TGATATCATTATGTCCGACAGACTGGACTGAGTAATGTTCTCTGGTATCT TTTGGATGATTGCATTTGTACGTTGTAGTTAAACTGGGAAATCGTAATAT TGAAATAGCTGACTAAAGTTTAGCCCTGTTGTAAAAGCTTGCATTGTGTG GTTATAATGCCATGGAAAACGTACAGAGAAATTTTATTTCATTTGAATTC TATGAGAAATGTGTTGTTATTTATTCTTAGTCCTTTGTAAGTTGTTGTAT TTATTCAGATGTTATCTGTGTATCTGTTATCATTATTTATCACTTGAGTT GTTATAGTCTTATTAGTTGTTGAATAGTCACTTCAGTTGCCGTTTGTGTT AGCTGCTGGGTAA

Coding sequence (CDS) from alignment at Sc0000094:477644..478756+

>transcript:BL95678_evm1 ID=transcript:BL95678_evm1|Name=transcript:BL95678_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=639bp|location=Sequence derived from alignment at Sc0000094:477644..478756+ (Branchiostoma lanceolatum)
ATGTATCCCAACGCCTGCGACGAACATATCATCACGATAGATTTCAGCTG
GAAAGGCAAGAGGAAGTCCTTTGGTAGCTTCTTCCTCGGCACGAGCCCGG
AGTTTGAGCTGGCCATCTACACCGTCTGCTTCCTGGCTGGACAAGGGGAG
AGCACGAGAGTCACTCTGGGGAAGAAGGACGCCATCACTGACAATGTGAA
CGCTGCTGGGTAAATGTATCCCAACGCCTGCGACGAACATATCATCACGA
TAGATTTCAGCTGGAAAGGCAAGAGGAAGTCCTTTGGTAGCTTCTTCCTC
GGCACGAGCCCGGAGTTTGAGCTGGCCATCTACACCGTCTGCTTCCTGGC
TGGACAAGGGGAGAGCACGAGAGTCACTCTGGGGAAGAAGGACGCCATCA
CTGACAATGTGAACGCTGCTGGGTAAATGTATCCCAACGCCTGCGACGAA
CATATCATCACGATAGATTTCAGCTGGAAAGGCAAGAGGAAGTCCTTTGG
TAGCTTCTTCCTCGGCACGAGCCCGGAGTTTGAGCTGGCCATCTACACCG
TCTGCTTCCTGGCTGGACAAGGGGAGAGCACGAGAGTCACTCTGGGGAAG
AAGGACGCCATCACTGACAATGTGAACGCTGCTGGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL95678gene:BL95678Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL95678_evm1-E1BL95678_evm1-E1-1564476830-293823Branchiostoma lanceolatumexon
BL95678_evm1-E2BL95678_evm1-E2-1564476830-293825Branchiostoma lanceolatumexon
BL95678_evm1-E3BL95678_evm1-E3-1564476830-293827Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL95678_evm1transcript:BL95678_evm1-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000094genomeSc0000094:477644..478756 +
Properties
Property NameValue
Transcript idBL95678_evm1
Biotypeprotein_coding